BLASTX nr result
ID: Sinomenium21_contig00043907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043907
(668 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ73018.1| photosystem II CP47 protein, partial (chloroplast... 61 2e-13
gb|ACD93086.1| CP47 protein [Leptopteris wilkesiana] 64 4e-12
gb|AEH27346.1| photosystem II cp47 protein, partial (chloroplast... 72 1e-10
gb|AEH26795.1| photosystem II cp47 protein, partial (chloroplast... 72 1e-10
gb|AEX95741.1| photosystem II CP47 chlorophyll apoprotein (chlor... 72 1e-10
gb|AEP25243.1| chlorophyll-A binding protein P5 [Drosera capensis] 72 1e-10
ref|YP_004769837.1| photosystem II 47 kDa protein (chloroplast) ... 72 1e-10
ref|YP_002149758.1| photosystem II CP47 chlorophyll apoprotein [... 72 1e-10
gb|ABV65483.1| photosystem II CP47 chlorophyll apoprotein, parti... 72 1e-10
gb|AAN32275.1| photosystem II CP47 protein, partial (chloroplast... 72 1e-10
gb|AAN32183.1| photosystem II CP47 protein, partial (chloroplast... 72 1e-10
gb|ABV65518.1| photosystem II CP47 chlorophyll apoprotein, parti... 72 2e-10
gb|ABV65514.1| photosystem II CP47 chlorophyll apoprotein, parti... 72 2e-10
gb|ADW82069.1| photosystem II CP47 protein [Phaeoceros carolinia... 54 2e-10
gb|AFU94342.1| PsbB, partial (chloroplast) [Quiina glaziovii] 71 3e-10
gb|AFU94334.1| PsbB, partial (chloroplast) [Ouratea sp. CCD-2012] 71 3e-10
gb|AFU94332.1| PsbB, partial (chloroplast) [Medusagyne oppositif... 71 3e-10
gb|AEN70619.1| photosystem II CP47 chlorophyll apoprotein, parti... 71 3e-10
gb|ADZ93589.1| CP47 protein [Luzula parviflora] 71 3e-10
gb|AEX01382.1| photosystem II CP47 protein [Ruppia maritima] 71 3e-10
>gb|AFJ73018.1| photosystem II CP47 protein, partial (chloroplast) [Encalypta
ciliata]
Length = 498
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+ D TLKS+G F SPR WFTFGH +FALL HIWHG L
Sbjct: 420 FEFDRATLKSDGVFRSSPRGWFTFGHATFALLSSSGHIWHGARTL 464
Score = 40.4 bits (93), Expect(2) = 2e-13
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
Frame = +1
Query: 133 ARTYLCDVFAGID-----QAEFGAFQMIGDP-IRRQVV 228
ART DVFAGID Q EFGAFQ +GDP +RQ+V
Sbjct: 461 ARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRQIV 498
>gb|ACD93086.1| CP47 protein [Leptopteris wilkesiana]
Length = 498
Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2
Query: 5 QLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
+ D TLKS+G F SPR WFTFGH +FAL+ FF HIWHG L
Sbjct: 421 EFDRATLKSDGVFRSSPRGWFTFGHATFALISFFGHIWHGARTL 464
Score = 33.1 bits (74), Expect(2) = 4e-12
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1
Query: 133 ARTYLCDVFAGID-----QAEFGAFQMIGD-PIRRQVV 228
ART DVFAGID Q E GAFQ +GD +RQ V
Sbjct: 461 ARTLFRDVFAGIDPDSDAQVESGAFQKLGDSTTKRQTV 498
>gb|AEH27346.1| photosystem II cp47 protein, partial (chloroplast) [Garrya
elliptica]
Length = 503
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 425 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 469
>gb|AEH26795.1| photosystem II cp47 protein, partial (chloroplast) [Gentiana
procera]
Length = 503
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 425 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 469
>gb|AEX95741.1| photosystem II CP47 chlorophyll apoprotein (chloroplast)
[Asphodeline damascena]
Length = 508
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 430 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 474
>gb|AEP25243.1| chlorophyll-A binding protein P5 [Drosera capensis]
Length = 462
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 384 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 428
>ref|YP_004769837.1| photosystem II 47 kDa protein (chloroplast) [Wolffiella lingulata]
gi|341834180|gb|AEK94450.1| photosystem II 47 kDa
protein [Wolffiella lingulata]
Length = 508
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 430 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 474
>ref|YP_002149758.1| photosystem II CP47 chlorophyll apoprotein [Cicer arietinum]
gi|221272369|sp|B5LMP9.1|PSBB_CICAR RecName:
Full=Photosystem II CP47 chlorophyll apoprotein;
AltName: Full=PSII 47 kDa protein; AltName: Full=Protein
CP-47 gi|197089825|gb|ACH41095.1| photosystem II CP47
chlorophyll apoprotein [Cicer arietinum]
Length = 509
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 430 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 474
>gb|ABV65483.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Floerkea proserpinacoides]
Length = 478
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 400 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 444
>gb|AAN32275.1| photosystem II CP47 protein, partial (chloroplast) [Leopoldia
comosa]
Length = 498
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 420 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 464
>gb|AAN32183.1| photosystem II CP47 protein, partial (chloroplast) [Asphodelus
albus]
Length = 498
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 420 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGARTL 464
>gb|ABV65518.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Hypericum kalmianum] gi|157689808|gb|ABV65526.1|
photosystem II CP47 chlorophyll apoprotein, partial
(chloroplast) [Irvingia malayana]
Length = 493
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 415 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGSRTL 459
>gb|ABV65514.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Hymenanthera alpina]
Length = 494
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHVSFALL FF HIWHG L
Sbjct: 416 FELDRATLKSDGVFRSSPRGWFTFGHVSFALLFFFGHIWHGSRTL 460
>gb|ADW82069.1| photosystem II CP47 protein [Phaeoceros carolinianus]
Length = 497
Score = 53.9 bits (128), Expect(2) = 2e-10
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +2
Query: 5 QLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
+ D TLKS+G SPR WFTFGH +FA L HIWHG L
Sbjct: 420 EFDRATLKSDGVLRSSPRGWFTFGHATFAPLFPSGHIWHGARTL 463
Score = 37.7 bits (86), Expect(2) = 2e-10
Identities = 23/38 (60%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Frame = +1
Query: 133 ARTYLCDVFAGID-----QAEFGAFQMIGDP-IRRQVV 228
ART DVFAGID Q EFGA Q +GDP +RQVV
Sbjct: 460 ARTLFRDVFAGIDSDIDAQVEFGASQKLGDPTTKRQVV 497
>gb|AFU94342.1| PsbB, partial (chloroplast) [Quiina glaziovii]
Length = 506
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD +TLKS+G F SPR WFTFGH SFALL FF HIWHG L
Sbjct: 428 FELDRSTLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTL 472
>gb|AFU94334.1| PsbB, partial (chloroplast) [Ouratea sp. CCD-2012]
Length = 508
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD +TLKS+G F SPR WFTFGH SFALL FF HIWHG L
Sbjct: 430 FELDRSTLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTL 474
>gb|AFU94332.1| PsbB, partial (chloroplast) [Medusagyne oppositifolia]
Length = 508
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD +TLKS+G F SPR WFTFGH SFALL FF HIWHG L
Sbjct: 430 FELDRSTLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTL 474
>gb|AEN70619.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Austrocedrus chilensis]
Length = 448
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHV+FALL FF HIWHG L
Sbjct: 397 FELDRATLKSDGVFRSSPRGWFTFGHVTFALLFFFGHIWHGARTL 441
>gb|ADZ93589.1| CP47 protein [Luzula parviflora]
Length = 498
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHV+FALL FF HIWHG L
Sbjct: 420 FELDRATLKSDGVFRSSPRGWFTFGHVTFALLFFFGHIWHGARTL 464
>gb|AEX01382.1| photosystem II CP47 protein [Ruppia maritima]
Length = 498
Score = 71.2 bits (173), Expect = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 FQLDHTTLKSNGEFNLSPRDWFTFGHVSFALLLFF*HIWHGVTVL 136
F+LD TLKS+G F SPR WFTFGHV+FALL FF HIWHG L
Sbjct: 420 FELDRATLKSDGVFRSSPRGWFTFGHVTFALLFFFGHIWHGARTL 464