BLASTX nr result
ID: Sinomenium21_contig00043765
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043765
(905 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 325 1e-86
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 321 3e-85
ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA... 320 4e-85
ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA... 320 4e-85
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 317 4e-84
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 317 4e-84
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 317 4e-84
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 317 4e-84
ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prun... 310 6e-82
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 285 2e-74
ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containin... 276 6e-72
ref|XP_002320513.1| RNA recognition motif-containing family prot... 276 8e-72
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 265 2e-68
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 259 1e-66
ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prun... 256 7e-66
ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containin... 252 2e-64
ref|XP_002302838.2| RNA recognition motif-containing family prot... 246 9e-63
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 246 1e-62
ref|XP_007020606.1| RNA binding protein, putative isoform 3, par... 244 3e-62
ref|XP_007020605.1| RNA binding protein, putative isoform 2 [The... 244 3e-62
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 325 bits (833), Expect = 1e-86
Identities = 169/300 (56%), Positives = 208/300 (69%), Gaps = 19/300 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+VV+NRIQ LEPENVSKIIG+LLLQDHSEREMIRLAF PDNLI SLI KAK++
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 664 LGLS----SKPI-------VPISDVPIQFTPFSPASSHLFSSP--TFRIGAPYWDSCALT 524
LGL+ S PI P+SD+P+QFTPFSPAS+H SSP + R + YWD+
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120
Query: 523 DQQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLS 362
DQQ + N+DF P YS+++ +DY+L N +FL LDDQ + DF SN +Y +
Sbjct: 121 DQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSE---P 177
Query: 361 SLGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVR 182
+LG RT+RR PSLPEFP+K CHYF+KG+CKHGNNC Y HG P+ FS +FS N+
Sbjct: 178 ALGPRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSN 237
Query: 181 EDHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
++H S+RG P+SIASLP++Y E YGKTLQAEGYLTESQRHGK
Sbjct: 238 DEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGK 297
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 321 bits (822), Expect = 3e-85
Identities = 171/298 (57%), Positives = 203/298 (68%), Gaps = 17/298 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV+NRIQ LEPENVSKIIG+LLLQDH ER+MIR AF DN IQ LI KAKAE
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 664 LGLSSKPIV------------PISDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTD 521
LGLSSKP V P+SD+P+QFTPFSPAS+ F SP R G YWD D
Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSP--RPGNSYWDPQVNGD 118
Query: 520 QQLIRNM-DFIPPVYSESISDDYQLHNQAKFLNLDDQL----GPDFISNCYYQDTGLSSL 356
QQ + + DF+P YS+S+ DD++L +Q FL ++DQL G +F + YY + +L
Sbjct: 119 QQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGSYYYAE---QAL 175
Query: 355 GARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVRED 176
R SRR PSLPEFP+K CHYFNKGFCKHGN+C YFHG +SFS +FS NEL +D
Sbjct: 176 NTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDD 235
Query: 175 HGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
H F S+RG P+SIASLP++Y E YG+TLQAEGYLTESQRHGK
Sbjct: 236 HVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGK 293
>ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
gi|508701581|gb|EOX93477.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 4,
partial [Theobroma cacao]
Length = 430
Score = 320 bits (821), Expect = 4e-85
Identities = 162/299 (54%), Positives = 208/299 (69%), Gaps = 18/299 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+VV+NRIQ LEPENVSKIIG+ LLQD +R+MIRLAF D L+ SLI KAK+E
Sbjct: 1 MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSE 60
Query: 664 LGLSSKPIV-----------PISDVPIQFTPFSPASSHLFSSP-TFRIGAPYWDSCALTD 521
L L+ + P++D+P+QFTP+SPASS S+P T R +P+WD +T
Sbjct: 61 LSLNKSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSCTVSTPATIRASSPFWDP-QVTA 119
Query: 520 QQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL------GPDFISNCYYQDTGLSS 359
+Q + N++F+PP YS+++++DY L NQ FLN+ DQL +F+SN YY + +
Sbjct: 120 EQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLESANSVSSEFLSNYYYSEP---A 176
Query: 358 LGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVRE 179
LG RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+S S +FS++ N++ +
Sbjct: 177 LGVRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESLSQLFSRNSNDVGND 236
Query: 178 DHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
DH ++RG P+SIASLP+LY EMYG+TLQAEGYLTESQRHGK
Sbjct: 237 DHVISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGK 295
>ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|590712174|ref|XP_007049318.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao]
gi|590712177|ref|XP_007049319.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao] gi|508701578|gb|EOX93474.1|
CCCH-type zinc fingerfamily protein with RNA-binding
domain, putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 320 bits (821), Expect = 4e-85
Identities = 162/299 (54%), Positives = 208/299 (69%), Gaps = 18/299 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+VV+NRIQ LEPENVSKIIG+ LLQD +R+MIRLAF D L+ SLI KAK+E
Sbjct: 1 MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSE 60
Query: 664 LGLSSKPIV-----------PISDVPIQFTPFSPASSHLFSSP-TFRIGAPYWDSCALTD 521
L L+ + P++D+P+QFTP+SPASS S+P T R +P+WD +T
Sbjct: 61 LSLNKSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSCTVSTPATIRASSPFWDP-QVTA 119
Query: 520 QQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL------GPDFISNCYYQDTGLSS 359
+Q + N++F+PP YS+++++DY L NQ FLN+ DQL +F+SN YY + +
Sbjct: 120 EQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLESANSVSSEFLSNYYYSEP---A 176
Query: 358 LGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVRE 179
LG RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+S S +FS++ N++ +
Sbjct: 177 LGVRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESLSQLFSRNSNDVGND 236
Query: 178 DHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
DH ++RG P+SIASLP+LY EMYG+TLQAEGYLTESQRHGK
Sbjct: 237 DHVISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGK 295
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 317 bits (812), Expect = 4e-84
Identities = 166/296 (56%), Positives = 205/296 (69%), Gaps = 15/296 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+ V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI SLI +AK +
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 664 LGLS----SKPIVP--ISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWD-SCALTDQQL 512
LGL S PI P ++D+P+QF PFSPAS+ SSP A P+WD A QQ
Sbjct: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
Query: 511 IRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLSSLGA 350
+ +++F+ P YS++ ++D+ L NQ +FL L+DQ + DF S+ +Y + L +
Sbjct: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV-- 178
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+SFS +FS + N++ EDH
Sbjct: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
F +RGFPISIASLP++Y E YGKTLQAEGYLTESQRHGK
Sbjct: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 317 bits (812), Expect = 4e-84
Identities = 166/296 (56%), Positives = 205/296 (69%), Gaps = 15/296 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+ V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI SLI +AK +
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 664 LGLS----SKPIVP--ISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWD-SCALTDQQL 512
LGL S PI P ++D+P+QF PFSPAS+ SSP A P+WD A QQ
Sbjct: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
Query: 511 IRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLSSLGA 350
+ +++F+ P YS++ ++D+ L NQ +FL L+DQ + DF S+ +Y + L +
Sbjct: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV-- 178
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+SFS +FS + N++ EDH
Sbjct: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
F +RGFPISIASLP++Y E YGKTLQAEGYLTESQRHGK
Sbjct: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 317 bits (812), Expect = 4e-84
Identities = 166/296 (56%), Positives = 205/296 (69%), Gaps = 15/296 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+ V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI SLI +AK +
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 664 LGLS----SKPIVP--ISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWD-SCALTDQQL 512
LGL S PI P ++D+P+QF PFSPAS+ SSP A P+WD A QQ
Sbjct: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
Query: 511 IRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLSSLGA 350
+ +++F+ P YS++ ++D+ L NQ +FL L+DQ + DF S+ +Y + L +
Sbjct: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV-- 178
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+SFS +FS + N++ EDH
Sbjct: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
F +RGFPISIASLP++Y E YGKTLQAEGYLTESQRHGK
Sbjct: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 317 bits (812), Expect = 4e-84
Identities = 166/296 (56%), Positives = 205/296 (69%), Gaps = 15/296 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDF+EST+ V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI SLI +AK +
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 664 LGLS----SKPIVP--ISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWD-SCALTDQQL 512
LGL S PI P ++D+P+QF PFSPAS+ SSP A P+WD A QQ
Sbjct: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
Query: 511 IRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLSSLGA 350
+ +++F+ P YS++ ++D+ L NQ +FL L+DQ + DF S+ +Y + L +
Sbjct: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV-- 178
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+SFS +FS + N++ EDH
Sbjct: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
F +RGFPISIASLP++Y E YGKTLQAEGYLTESQRHGK
Sbjct: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
>ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
gi|462411471|gb|EMJ16520.1| hypothetical protein
PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 310 bits (793), Expect = 6e-82
Identities = 171/294 (58%), Positives = 202/294 (68%), Gaps = 13/294 (4%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV+NRIQ +EPENVSKIIG+LLLQDH ER+MIRLAF PDNLIQSLI KAK E
Sbjct: 1 MDFSESTKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKAKTE 60
Query: 664 LGLS----SKPI-------VPISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWDSCALT 524
LGL S PI VP+SD P+QFTP++P + SSPT +GA P+ D
Sbjct: 61 LGLCKLAVSAPISPSQVNQVPVSDPPLQFTPYTPNLTRPISSPT-PLGAVNPFRDPQLPG 119
Query: 523 DQQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQLGPDFISNCYYQDTGLSSLGART 344
DQQ ++N++F+PP YS+S +DY+L NQ +FL PDF SN Y + LS RT
Sbjct: 120 DQQPLQNVEFVPPGYSDSAIEDYRLQNQMQFL-------PDFSSNYCYHEPALS---VRT 169
Query: 343 SRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGFX 164
SRR PSLPEFP+K CHYFNKGFCKHG+NC YFHG +SFS +LNEL +DH
Sbjct: 170 SRRSPSLPEFPLKVCHYFNKGFCKHGSNCRYFHGHPMAESFS---HPNLNELSNDDHVVS 226
Query: 163 XXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+RGFPISIASLP++Y E YG+TLQAEGYLTESQRHGK
Sbjct: 227 PGSLEKLEIEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGK 280
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 285 bits (728), Expect = 2e-74
Identities = 162/295 (54%), Positives = 198/295 (67%), Gaps = 14/295 (4%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV++RIQ L+PENV KIIG LLLQ+H ER MIRLAF PDNLIQS+I KAK E
Sbjct: 1 MDFSESTKVVYSRIQKLDPENVGKIIGILLLQEHGERNMIRLAFSPDNLIQSVINKAKTE 60
Query: 664 L--GLSSKPIVP-------ISDVPIQFTPFSPASSHLFSSPTFRIGA--PYWDSCALT-D 521
L + S PI P +SD+P+QFTP+SP+ + S PT +GA P+ + D
Sbjct: 61 LCKHVVSSPISPSQVNQVAVSDLPMQFTPYSPSLTRPISCPT-TLGAANPFSREAQVAGD 119
Query: 520 QQLIRNMDFIPPVYSESISDDYQLH-NQAKFLNLDDQLGPDFISN-CYYQDTGLSSLGAR 347
QQ ++ +DFIPP Y +S ++DY L +Q +FL PDF SN CY++ +LG R
Sbjct: 120 QQPLQAVDFIPPGYLDSAAEDYCLQSHQMQFL-------PDFSSNICYHE----PALGVR 168
Query: 346 TSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGF 167
T RR PSLPEFP+K CHYF+KGFCKHGNNC YFHG P+SFS F + NE +DH
Sbjct: 169 T-RRSPSLPEFPLKVCHYFSKGFCKHGNNCRYFHGHAMPESFSQFFCPNSNEAQGDDHVV 227
Query: 166 XXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+RGFPISIASLP++Y E YG+TLQAEGYLTESQRHGK
Sbjct: 228 SPGSLEKLEYEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGK 282
>ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Solanum tuberosum]
gi|565394754|ref|XP_006363021.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X2
[Solanum tuberosum]
Length = 531
Score = 276 bits (707), Expect = 6e-72
Identities = 144/283 (50%), Positives = 190/283 (67%), Gaps = 2/283 (0%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV+NRIQ LE E+VSKIIG+LL +DH E++MIRLAF PDN+I SLI KAK
Sbjct: 3 MDFSESTKVVYNRIQKLESEHVSKIIGYLLYRDHGEQDMIRLAFCPDNVIHSLINKAKNS 62
Query: 664 LGLSSKPIV--PISDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTDQQLIRNMDFI 491
LGLS KP + P+S P++F FS AS F++ ++G PYW+ + + I N+D +
Sbjct: 63 LGLSPKPAISGPLSP-PLKFGLFSSASPRPFTN--HQLGNPYWEHQGPAENRPIHNLDLL 119
Query: 490 PPVYSESISDDYQLHNQAKFLNLDDQLGPDFISNCYYQDTGLSSLGARTSRRCPSLPEFP 311
P S+ ++D++QL NQ +FL+LDD +F+ + G R+ RR SLPE P
Sbjct: 120 PVGCSDPMTDEHQLQNQLQFLSLDDHSDHNFVGRTF---------GPRSCRRSSSLPEIP 170
Query: 310 VKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGFXXXXXXXXXXXX 131
VK CHYFNKG+CKHGNNC Y HG P+SFS +F+ +LN++V ++H
Sbjct: 171 VKICHYFNKGYCKHGNNCRYVHGYPTPESFSQVFNGNLNDVVTDEHVISPGSLEKLEMEL 230
Query: 130 XXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
+ G P+SIASLP+LY EM+G+TLQAEGYLTESQRHGK
Sbjct: 231 TQLLKFKGGDPVSIASLPMLYHEMFGRTLQAEGYLTESQRHGK 273
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 276 bits (706), Expect = 8e-72
Identities = 150/296 (50%), Positives = 183/296 (61%), Gaps = 15/296 (5%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV+NRIQ +EPE V KIIG++LLQ+H EREMIRLAF PDNLI + I KAK++
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 664 LGLSSKPI-----------VPISDVPIQFTPFSPASSHLFSSPT-FRIGAPYWDSCALTD 521
LGL+ P+ P+SDV +QF P + SSH SSP R +WD+
Sbjct: 61 LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVT-- 118
Query: 520 QQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL---GPDFISNCYYQDTGLSSLGA 350
DY+L NQ +FL DDQL DF S+ +Y + +LG
Sbjct: 119 --------------------DYRLQNQMQFLTSDDQLEFVNSDFSSSYFYPEP---ALGP 155
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR PSLPEFPVK CHYFNKGFCKHGNNC YFHG P+SFS + S + NE+ ++H
Sbjct: 156 RTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHF 215
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+RG P+SIASLP++Y E YG+ LQAEGYLTESQRHGK
Sbjct: 216 ISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGK 271
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 265 bits (677), Expect = 2e-68
Identities = 153/296 (51%), Positives = 187/296 (63%), Gaps = 14/296 (4%)
Frame = -2
Query: 847 QMDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKA 668
+MDF ESTR VF+RIQ LEPENVSKI+G+LLL+D+ EREM LA PD+LI SLI KAK+
Sbjct: 9 EMDF-ESTRTVFSRIQKLEPENVSKIVGYLLLRDNGEREMNELAVCPDSLIISLINKAKS 67
Query: 667 ELGLSSKPIVPI--------SDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTDQQL 512
ELGL+SKP + SD+P+ FTPFS ++S FSSP PYW+ TDQQ
Sbjct: 68 ELGLASKPQISTQIPQNSFNSDLPLPFTPFSLSTSRPFSSPA-TFAPPYWEHQPGTDQQA 126
Query: 511 IRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ------LGPDFISNCYYQDTGLSSLGA 350
+ N+D + P ++Y+ NQA L LDDQ LG + + +YQ+ L+SL A
Sbjct: 127 LLNLDLVSP-------EEYRFQNQAHSLGLDDQLEPVNPLGAELQNEYFYQEPTLASLSA 179
Query: 349 RTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHG 170
RTSRR S+PE P K C YF +GFCKHGNNC +FHGQ D F FS S E + +DH
Sbjct: 180 RTSRRTSSMPEIPSKLCVYFQRGFCKHGNNCRFFHGQHGLDHFLTGFSTSPTESLGDDHM 239
Query: 169 FXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
++R PISIASLP LY E +GKTLQAEGYLTESQRHGK
Sbjct: 240 ISSGTLERLEMELLQLLRAKR-TPISIASLPQLYYERFGKTLQAEGYLTESQRHGK 294
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 259 bits (661), Expect = 1e-66
Identities = 147/299 (49%), Positives = 183/299 (61%), Gaps = 18/299 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST++V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PDNL+ SLI +AK E
Sbjct: 1 MDFSESTKIVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLMHSLITRAKTE 60
Query: 664 LGLSSK-----PI-------VPISDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTD 521
LGLSSK PI +P+ D+P+QF ++P S+ P + YWD
Sbjct: 61 LGLSSKSPVPAPISPSQVNQIPVLDIPLQFQSYTPVSAR----PNY-----YWD------ 105
Query: 520 QQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL------GPDFISNCYYQDTGLSS 359
N + I Y +S ++++ L NQ L+L+D L DF S YY + +
Sbjct: 106 ----HNAEVINQGYVDSTAENFHLQNQLHLLSLEDPLESACSVSSDFSSGYYYPEL---A 158
Query: 358 LGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVRE 179
LG R SRR PSL EFPVK CHYFNKG CKHG NC YFHG P+SF + S NE+ +
Sbjct: 159 LGLRASRRSPSLSEFPVKVCHYFNKGHCKHGTNCKYFHGHPLPESFPRIVS---NEVPND 215
Query: 178 DHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
+ S+ G P+SIASLP++Y E YG++LQAEGYLTESQRHGK
Sbjct: 216 EQAISPGTLERLEMEIVELLRSRIGSPVSIASLPMMYYEKYGRSLQAEGYLTESQRHGK 274
>ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
gi|462409724|gb|EMJ15058.1| hypothetical protein
PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 256 bits (655), Expect = 7e-66
Identities = 143/293 (48%), Positives = 190/293 (64%), Gaps = 12/293 (4%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSE T V++RIQ LEP+N +KIIG+LLLQD+ E+EM RLA P++LI +I KAK E
Sbjct: 1 MDFSEYTNAVYSRIQKLEPDNATKIIGYLLLQDYGEQEMARLAMAPEHLIHQVIVKAKTE 60
Query: 664 LG-LSSK----PIVP-ISDVPIQFTPFSPASSHLFSSPT-FRIGAPYWDSCALTDQQLIR 506
L L++K PI P ++ V F P+ P SS FSSP R+ +WD+ + Q
Sbjct: 61 LQQLAAKSVASPISPSLNPVTGAFAPYLPVSSRPFSSPAAIRVPTAFWDAQLVAKQ---- 116
Query: 505 NMDFIPPVYSESISDDYQLHNQAKFLNLDDQLGP-----DFISNCYYQDTGLSSLGARTS 341
+ DF+P Y +SI++ L NQA+FL+L+DQ+ P SN YY+D + +L RT
Sbjct: 117 SPDFMPLGYPDSIAE---LQNQAQFLSLEDQIEPLNSGISGFSNDYYRDAEIDNLSVRTG 173
Query: 340 RRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGFXX 161
RR S+ EFPVK CHYFNKGFCKHG++C Y+HGQ+ P+SFS M+ N+ + +DH
Sbjct: 174 RRFSSVTEFPVKICHYFNKGFCKHGSSCRYYHGQVIPESFSQMYG---NDCINDDHVISP 230
Query: 160 XXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+RG PISIASLP++Y + +GK+LQAEGYLTESQRHGK
Sbjct: 231 GSLEKLEWEITELLRSRRGIPISIASLPMMYYDKFGKSLQAEGYLTESQRHGK 283
>ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Solanum lycopersicum]
Length = 532
Score = 252 bits (643), Expect = 2e-64
Identities = 135/284 (47%), Positives = 186/284 (65%), Gaps = 3/284 (1%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
M+FSESTR V+NRIQ LEP++V+KII +L+ Q H E++MIRLAF P+N+I+S++ KAK +
Sbjct: 3 MNFSESTRDVYNRIQKLEPDHVNKIIVYLIDQHHGEQDMIRLAFSPENVIRSIVNKAKND 62
Query: 664 LGL-SSKPIV--PISDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTDQQLIRNMDF 494
LGL S KP + P+S P++F FS AS F++ ++G YW+ + + I + D
Sbjct: 63 LGLLSPKPAISGPLSP-PLKFGLFSSASPRPFTN--HQVGNLYWEHQGQAENRPIHSSDI 119
Query: 493 IPPVYSESISDDYQLHNQAKFLNLDDQLGPDFISNCYYQDTGLSSLGARTSRRCPSLPEF 314
+P S+ ++D+YQL NQ FL+L D +F+ + G R+SRR SLPE
Sbjct: 120 LPAGCSDPMTDEYQLQNQLHFLSLYDHSDHNFVGRTF---------GPRSSRRTSSLPEI 170
Query: 313 PVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGFXXXXXXXXXXX 134
PVK CHYFNKG+CKHGNNC Y H +SFS +F+ +LN++V ++H
Sbjct: 171 PVKICHYFNKGYCKHGNNCRYVHAYPTQESFSQVFNGNLNDVVTDEHAISPGSLKKLEME 230
Query: 133 XXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+ G P+SIASLP+LY EM+G+TLQAEGYLTESQRHGK
Sbjct: 231 LTQLLKSKGGDPVSIASLPMLYHEMFGRTLQAEGYLTESQRHGK 274
>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 391
Score = 246 bits (628), Expect = 9e-63
Identities = 144/295 (48%), Positives = 176/295 (59%), Gaps = 14/295 (4%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSEST+VV+NRIQA+EPE V KIIG++L+Q+H EREMIRLAF PDNLI ++I KAK++
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 664 LGLSSKPIV-----------PISDVPIQFTPFSPASSHLFSSPTFRIGAPYWDSCALTDQ 518
LGL+ P++ P+SDVP QF P S SSH SP
Sbjct: 61 LGLNKIPVLNLISPSQVNPSPVSDVPQQFIPNSTVSSHPIFSPV---------------- 104
Query: 517 QLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL---GPDFISNCYYQDTGLSSLGAR 347
+R YSE + +DY++ NQ +FL LDD + DF S+ Y + LS R
Sbjct: 105 -KVRTAG-----YSEMVPEDYRIQNQMQFLALDDPIEFVNSDFSSSYIYPEPALS---PR 155
Query: 346 TSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVREDHGF 167
TSRR PSLPEFPVK CHYF KGFCKHGNNC S +LNE+ E+
Sbjct: 156 TSRRSPSLPEFPVKICHYFIKGFCKHGNNC----------------SSNLNEIANEECVV 199
Query: 166 XXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
S+RG P+SIASLP++Y EMYG+TLQAEGYLTESQRHGK
Sbjct: 200 SPGSFEKLELELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGK 254
>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein,
putative [Ricinus communis]
Length = 551
Score = 246 bits (627), Expect = 1e-62
Identities = 143/300 (47%), Positives = 184/300 (61%), Gaps = 19/300 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
MDFSE TRVVFN+I+ +EPENV+KIIG+LLLQD S++EMI LA PD +IQ +I KAKAE
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 664 LG-----LSSKPIVP-------ISDVPIQFTPFSPASSHLFSSPT-FRIGAPYWDSCALT 524
L ++ P+ P +S+ QF FSP SS + SP FR+ + YW+S +
Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTYWESQVAS 120
Query: 523 DQQLIRNMDFIPPVYSESISDDYQLHNQAKFLNLDDQL------GPDFISNCYYQDTGLS 362
+ DF+P Y +S++ +L NQA+FL+L+DQL F S+ +Y D L
Sbjct: 121 K----HSSDFVPMTYQDSMT---ELQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALG 173
Query: 361 SLGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNELVR 182
S AR RR SL E +K CHYFNKG+CKHG+NC YFHGQ+ DSF F + +
Sbjct: 174 SFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQIS-DSFPRTF-----DAIN 227
Query: 181 EDHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRHGK 2
ED F S++G P+SIASLP+LY E YGK LQA+GYLTESQRHGK
Sbjct: 228 EDQIFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGK 287
>ref|XP_007020606.1| RNA binding protein, putative isoform 3, partial [Theobroma cacao]
gi|508720234|gb|EOY12131.1| RNA binding protein,
putative isoform 3, partial [Theobroma cacao]
Length = 507
Score = 244 bits (623), Expect = 3e-62
Identities = 149/302 (49%), Positives = 188/302 (62%), Gaps = 21/302 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
M+FS+ TRV+FNRI LEPEN +K+IG LLLQ + ++EM++LA PD +IQ +I KAKAE
Sbjct: 1 MEFSDCTRVLFNRIWKLEPENAAKVIGILLLQGYGDQEMVQLAMCPDMVIQEVIYKAKAE 60
Query: 664 LGL-----SSKPIVPI------SDVPIQFTPFSP-ASSHLFSSP-TFRIGAPYWDSCALT 524
L S PI P S+ P QFT FSP SS F SP +F++ +PYW+
Sbjct: 61 LQQLPLKSGSPPISPSMNSAPGSEFPSQFTSFSPPVSSRPFLSPRSFQVTSPYWE----- 115
Query: 523 DQQLI--RNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ-----LGPDFISNCY-YQDTG 368
QQL N DF+P Y +S S+ L +Q++ L+L++Q LG SN Y Y D
Sbjct: 116 -QQLAAKHNSDFMPSAYLDSASE---LQSQSQLLSLEEQIESLNLGNGGFSNDYCYSDAV 171
Query: 367 LSSLGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNEL 188
L +LG RT RR +LP+FPVK CHYFNKG+CKHG+NC YFHGQ+ D+F MF + +
Sbjct: 172 LGNLGVRTERRHQNLPDFPVKTCHYFNKGYCKHGSNCRYFHGQVS-DNFPHMFGNNSMDA 230
Query: 187 VREDHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRH 8
V ED S+RG P+SIASLPLLY E YGK LQA+GYLTESQRH
Sbjct: 231 VNED---PFISLENLELEIVELLKSRRGEPVSIASLPLLYYEKYGKVLQADGYLTESQRH 287
Query: 7 GK 2
GK
Sbjct: 288 GK 289
>ref|XP_007020605.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508720233|gb|EOY12130.1| RNA binding protein,
putative isoform 2 [Theobroma cacao]
Length = 569
Score = 244 bits (623), Expect = 3e-62
Identities = 149/302 (49%), Positives = 188/302 (62%), Gaps = 21/302 (6%)
Frame = -2
Query: 844 MDFSESTRVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIQSLIEKAKAE 665
M+FS+ TRV+FNRI LEPEN +K+IG LLLQ + ++EM++LA PD +IQ +I KAKAE
Sbjct: 1 MEFSDCTRVLFNRIWKLEPENAAKVIGILLLQGYGDQEMVQLAMCPDMVIQEVIYKAKAE 60
Query: 664 LGL-----SSKPIVPI------SDVPIQFTPFSP-ASSHLFSSP-TFRIGAPYWDSCALT 524
L S PI P S+ P QFT FSP SS F SP +F++ +PYW+
Sbjct: 61 LQQLPLKSGSPPISPSMNSAPGSEFPSQFTSFSPPVSSRPFLSPRSFQVTSPYWE----- 115
Query: 523 DQQLI--RNMDFIPPVYSESISDDYQLHNQAKFLNLDDQ-----LGPDFISNCY-YQDTG 368
QQL N DF+P Y +S S+ L +Q++ L+L++Q LG SN Y Y D
Sbjct: 116 -QQLAAKHNSDFMPSAYLDSASE---LQSQSQLLSLEEQIESLNLGNGGFSNDYCYSDAV 171
Query: 367 LSSLGARTSRRCPSLPEFPVKACHYFNKGFCKHGNNCHYFHGQLQPDSFSPMFSQSLNEL 188
L +LG RT RR +LP+FPVK CHYFNKG+CKHG+NC YFHGQ+ D+F MF + +
Sbjct: 172 LGNLGVRTERRHQNLPDFPVKTCHYFNKGYCKHGSNCRYFHGQVS-DNFPHMFGNNSMDA 230
Query: 187 VREDHGFXXXXXXXXXXXXXXXXXSQRGFPISIASLPLLYQEMYGKTLQAEGYLTESQRH 8
V ED S+RG P+SIASLPLLY E YGK LQA+GYLTESQRH
Sbjct: 231 VNED---PFISLENLELEIVELLKSRRGEPVSIASLPLLYYEKYGKVLQADGYLTESQRH 287
Query: 7 GK 2
GK
Sbjct: 288 GK 289