BLASTX nr result
ID: Sinomenium21_contig00043725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043725
(298 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 120 2e-25
emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thal... 119 3e-25
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 118 1e-24
gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa] 117 1e-24
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 116 3e-24
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 116 3e-24
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 116 3e-24
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 116 3e-24
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 116 3e-24
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 116 3e-24
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 116 3e-24
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 115 5e-24
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 115 5e-24
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 115 5e-24
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 115 5e-24
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 115 5e-24
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 115 5e-24
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 115 5e-24
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 114 1e-23
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 114 1e-23
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 120 bits (302), Expect = 2e-25
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = -2
Query: 243 AEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSND 64
+E+ W+ SLL ELGITLPK P I+CD+VGATYL ANPVFHS+M H+A+DYHF+RD VS
Sbjct: 1434 SEIRWVCSLLTELGITLPKMPVIYCDNVGATYLSANPVFHSRMKHLALDYHFIRDNVSAG 1493
Query: 63 HLTVSYVSTHDQLADALTKLL 1
L VS++STHDQLADALTK L
Sbjct: 1494 ALRVSHISTHDQLADALTKPL 1514
>emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thaliana]
gi|10177325|dbj|BAB10674.1| copia-like retroelement pol
polyprotein-like [Arabidopsis thaliana]
Length = 1021
Score = 119 bits (299), Expect = 3e-25
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
A E+ WI SLL ELGITLPKPP ++CD+VGAT+LCANPVFHS+M HIA+DYHF+R +V
Sbjct: 209 ACEIQWICSLLTELGITLPKPPVVYCDNVGATFLCANPVFHSRMKHIAIDYHFIRGQVQQ 268
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V++V+T DQLADALTK L
Sbjct: 269 GILRVAHVNTRDQLADALTKPL 290
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 118 bits (295), Expect = 1e-24
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
AAE+ WI SLL ELG+TLP+ P I+CD+VGAT+LC+NPVFHS+M H+A+DYHF+R++V N
Sbjct: 457 AAEIRWICSLLTELGVTLPQQPVIYCDNVGATHLCSNPVFHSRMKHVALDYHFIREQVQN 516
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L VS++S DQLADALTK L
Sbjct: 517 GLLRVSHISASDQLADALTKPL 538
>gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]
Length = 216
Score = 117 bits (294), Expect = 1e-24
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
A+E+ WI SLL EL +TLP P I+CD+VGATYL ANPVFHS+M HIA+DYHF+RD V +
Sbjct: 115 ASELCWICSLLSELYVTLPSTPVIYCDNVGATYLSANPVFHSRMKHIAIDYHFVRDNVQS 174
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V++VSTHDQLADALTK L
Sbjct: 175 GRLRVTHVSTHDQLADALTKPL 196
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1330 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1389
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1390 GALRVVHVSTHDQLADTLTKPL 1411
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1365 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1424
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1425 GALRVVHVSTHDQLADTLTKPL 1446
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1346 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1405
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1406 GALRVVHVSTHDQLADTLTKPL 1427
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1365 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1424
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1425 GALRVVHVSTHDQLADTLTKPL 1446
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1346 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1405
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1406 GALRVVHVSTHDQLADTLTKPL 1427
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 116 bits (291), Expect = 3e-24
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
AAE+ WI SLL ELG+TLP+ P I+CD+VGAT LC+NPVFHS+M H+A+DYHF+R++V N
Sbjct: 366 AAEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQN 425
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L VS++S DQLADALTK L
Sbjct: 426 GLLRVSHISASDQLADALTKPL 447
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 116 bits (291), Expect = 3e-24
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L +PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1365 SSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQS 1424
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1425 GALRVVHVSTHDQLADTLTKPL 1446
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1367 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1426
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1427 GALRVVHVSTHDQLADTLTKPL 1448
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1222 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1281
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1282 GALRVVHVSTHDQLADTLTKPL 1303
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1367 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1426
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1427 GALRVVHVSTHDQLADTLTKPL 1448
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1367 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1426
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1427 GALRVVHVSTHDQLADTLTKPL 1448
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1367 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1426
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1427 GALRVVHVSTHDQLADTLTKPL 1448
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1367 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1426
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1427 GALRVVHVSTHDQLADTLTKPL 1448
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 115 bits (289), Expect = 5e-24
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -2
Query: 246 AAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVSN 67
++E+ WI SLL ELGI L PP I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V +
Sbjct: 1348 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1407
Query: 66 DHLTVSYVSTHDQLADALTKLL 1
L V +VSTHDQLAD LTK L
Sbjct: 1408 GALRVVHVSTHDQLADTLTKPL 1429
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 114 bits (285), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%)
Frame = -2
Query: 249 IAAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVS 70
I++E+ WI SLL ELGI L P I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V
Sbjct: 1366 ISSELQWICSLLTELGIQLSHPSVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQ 1425
Query: 69 NDHLTVSYVSTHDQLADALTKLL 1
+ L V +VSTHDQLAD LTK L
Sbjct: 1426 SGALRVVHVSTHDQLADTLTKPL 1448
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 114 bits (285), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%)
Frame = -2
Query: 249 IAAEVLWIQSLLGELGITLPKPPSIHCDSVGATYLCANPVFHSKMMHIAMDYHFMRDKVS 70
I++E+ WI SLL ELGI L P I+CD+VGATYLCANPVFHS+M HIA+DYHF+R++V
Sbjct: 1366 ISSELQWICSLLTELGIQLSHPSVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQ 1425
Query: 69 NDHLTVSYVSTHDQLADALTKLL 1
+ L V +VSTHDQLAD LTK L
Sbjct: 1426 SGALRVVHVSTHDQLADTLTKPL 1448