BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00043703
         (492 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38165.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   172   3e-41
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr...   171   1e-40
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun...   162   4e-38
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   160   2e-37
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   159   5e-37
ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phas...   157   1e-36
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p...   157   1e-36
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...   145   4e-33
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr...   143   3e-32
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...   142   6e-32
ref|XP_002310520.1| pentatricopeptide repeat-containing family p...   135   6e-30
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps...   135   8e-30
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps...   135   8e-30
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi...   118   1e-24
ref|XP_002324099.1| hypothetical protein POPTR_0017s12720g [Popu...   117   2e-24
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi...   111   9e-23

>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/124 (67%), Positives = 100/124 (80%)
 Frame = -2

Query: 374 VGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCL 195
           V DLYLPNS+  A LL SCL+SR     R VH+RI+ TQF+ EIFI +RL DVY KC CL
Sbjct: 7   VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHD 15
           +DA KLF++MPQ+NTF+WNS++S   KSGFLDEA RLF ++PE DQCSWNSM+SGFAQHD
Sbjct: 67  DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHD 126

Query: 14  RFEE 3
           RFEE
Sbjct: 127 RFEE 130



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/119 (28%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     L +  ++H+R++KT +F  ++ + + L D+YAKC  +N+A +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++M  +N  S  S++S +A++  +  A  +F  + + +  SWN++I+G+ Q+   EE
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEE 364


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/124 (67%), Positives = 100/124 (80%)
 Frame = -2

Query: 374 VGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCL 195
           V DLYLPNS+  A LL SCL+SR     R VH+RI+ TQF+ EIFI +RL DVY KC CL
Sbjct: 7   VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHD 15
           +DA KLF++MPQ+NTF+WNS++S   KSGFLDEA RLF ++PE DQCSWNSM+SGFAQHD
Sbjct: 67  DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHD 126

Query: 14  RFEE 3
           RFEE
Sbjct: 127 RFEE 130



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/119 (28%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     L +  ++H+R++KT +F  ++ + + L D+YAKC  +N+A +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++M  +N  S  S++S +A++  +  A  +F  + + +  SWN++I+G+ Q+   EE
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEE 364



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P       LL +C     LL  R+ H+ ++K  F       S+IF+ + L D+Y KC  +
Sbjct: 379 PTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSI 438

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRAL 72
            D  ++F KM +++  SWN+I+  +A++G+  EA ++FR +
Sbjct: 439 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM 479


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  172 bits (437), Expect = 3e-41
 Identities = 81/134 (60%), Positives = 104/134 (77%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           M+++  ++  VGDL   +S+  A LL SCLKS+ L D RR+H+RIIKTQFA E+FI +RL
Sbjct: 1   MSKHGFVKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            D Y KC C +DA K+F++MP+KN FSWN+I+S   KSGFLDE  RLF ++PE DQCSWN
Sbjct: 61  IDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           S+I+GFAQHDRFEE
Sbjct: 121 SLIAGFAQHDRFEE 134



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSR-LRDVYAKCCCLNDAHK 180
           P+   +A ++ +C           +H+ ++K     +  ILS  L D+YAKC  +N+A  
Sbjct: 250 PDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARC 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP +N  S  S++S +AK+  +  A  LF  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEE 368



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/106 (28%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
 Frame = -2

Query: 329 LQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKNT 150
           L +C   + L    ++H  ++K+QF  ++++ S L D+Y+KC  ++ A ++F+ M ++N 
Sbjct: 158 LSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNV 217

Query: 149 FSWNSILSAFAKSGFLDEADRLFRALPEA----DQCSWNSMISGFA 24
            SWNS+++ + ++G   EA  +F  + E+    D+ +  S++S  A
Sbjct: 218 VSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACA 263


>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
           gi|568821173|ref|XP_006465064.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
           gi|557534290|gb|ESR45408.1| hypothetical protein
           CICLE_v10000448mg [Citrus clementina]
          Length = 705

 Score =  171 bits (433), Expect = 1e-40
 Identities = 83/134 (61%), Positives = 103/134 (76%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           MA  RS++  VGDL   +S+  A LL SCL+S+ + D RRVH+RIIK+QFASEIFI +RL
Sbjct: 1   MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            DVYAKC CL  A K+F+KM  KN F+WNSI++   K GF+D+A RLF ++PE DQCSWN
Sbjct: 61  IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           SM+SGFAQHDRF E
Sbjct: 121 SMVSGFAQHDRFSE 134



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/119 (28%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQ-FASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C       +  ++H+R+++ +   +++ + + L D+YAKC  LN+A  
Sbjct: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP +N  S  S++S +AK+  +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/99 (28%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 RVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSG 108
           +VH+ + K++++S++++ S L D+Y KC  ++ A ++F+ M ++N  SWNS+++ + ++G
Sbjct: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231

Query: 107 FLDEADRLFRALP----EADQCSWNSMISGFAQHDRFEE 3
              +A  +F  +     E D+ +  S++S  A    F+E
Sbjct: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cicer arietinum]
          Length = 706

 Score =  164 bits (414), Expect = 2e-38
 Identities = 77/134 (57%), Positives = 101/134 (75%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           M ++  +R  VGDL   +S+  A LL  C++S+ + + RRVH+RIIKTQF+SEIFI +RL
Sbjct: 1   MGKHGLVRKVVGDLSFLDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            DVY KC CL DA K+F+ MP++N FSWN++LSA  K G LDEA  +F+ +PE DQCSWN
Sbjct: 61  VDVYGKCGCLEDARKVFDHMPERNIFSWNAVLSALTKCGALDEALNVFKCMPEPDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           +M+SGFAQ DRFEE
Sbjct: 121 AMVSGFAQRDRFEE 134



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/119 (28%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     + +  ++H+R++K  +F +++ + + L D+YAKC  +N+A  
Sbjct: 250 PDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAKCKRVNEARL 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP ++  S  S++S +AK   +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWNALIAGYTQNGENEE 368


>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
           gi|462399627|gb|EMJ05295.1| hypothetical protein
           PRUPE_ppa002338mg [Prunus persica]
          Length = 685

 Score =  162 bits (410), Expect = 4e-38
 Identities = 71/110 (64%), Positives = 91/110 (82%)
 Frame = -2

Query: 332 LLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKN 153
           LL SC++++   D  R+H+R+IKTQF+SEIFI +RL D Y KC CL+DA KLF+KMPQ+N
Sbjct: 5   LLDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKMPQRN 64

Query: 152 TFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           TF+WNSI+S   K GF+D+A ++FR +PE DQCSWNSM+SGFAQHDRFEE
Sbjct: 65  TFTWNSIISTLTKLGFIDDAVQIFRLMPEPDQCSWNSMVSGFAQHDRFEE 114



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/121 (28%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDA 186
           + P+   +A ++ +C     + + +++++ +IK  ++  ++ + + L D+YAKC  L  A
Sbjct: 228 FKPDELTLASVVSACASLSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAKCNRLKQA 287

Query: 185 HKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFE 6
             +F+ MP +N  S  S++S +AK+  +  A  +F  + E +  SWN++ISG+ Q+   E
Sbjct: 288 RWIFDGMPVRNVVSETSMVSGYAKAASVKAARLMFAKMMERNIVSWNALISGYTQNGENE 347

Query: 5   E 3
           E
Sbjct: 348 E 348



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 IRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAK 207
           +++ V D  L N       L +C   R L    ++H+ I K+ ++S++++ S L D+Y+K
Sbjct: 120 VKLHVEDFVL-NEYSFGSALSACAGLRKLKMGVQIHAFIAKSCYSSDVYMGSALIDMYSK 178

Query: 206 CCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEA----DQCSWNSM 39
           C  +  A ++F+ M  +NT SWNS+++ + ++G   EA  +F  + +     D+ +  S+
Sbjct: 179 CGSVASAQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVFVRMMDGGFKPDELTLASV 238

Query: 38  ISGFAQHDRFEE 3
           +S  A     +E
Sbjct: 239 VSACASLSAIKE 250


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/134 (58%), Positives = 100/134 (74%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           MA++  +R  VGDL   +S+  A LL +C+KS+ + + R VH+RIIKTQF+SEIFI +RL
Sbjct: 1   MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            DVY KC  L DA K+F+ M Q+NTFSWN++L A  K G LDEA  LF+ +PE DQCSWN
Sbjct: 61  VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           +M+SGFAQ DRFEE
Sbjct: 121 AMVSGFAQRDRFEE 134



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/119 (27%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIK-TQFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A +  +C     + +  ++H+R++K  ++ +++ + + L D+YAKC  +N+A  
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP ++  S  S++S +AK+  +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEE 368


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  159 bits (401), Expect = 5e-37
 Identities = 75/134 (55%), Positives = 102/134 (76%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           M R+  ++  VG+L   +S+  A LL SC++S+  +D RR+H+RIIKTQF+SEIFI +RL
Sbjct: 1   MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            D Y KC    DA K+F++MPQ+NTFS+N++LS   K G LDEA  +F+++PE DQCSWN
Sbjct: 61  VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           +M+SGFAQHDRFEE
Sbjct: 121 AMVSGFAQHDRFEE 134



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/119 (26%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     + +  ++H+R++K  ++ +++ + + L D+YAKC  +N+A  
Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP +N  S  S++  +A++  +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEE 368


>ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
           gi|561010882|gb|ESW09789.1| hypothetical protein
           PHAVU_009G156000g [Phaseolus vulgaris]
          Length = 705

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/134 (56%), Positives = 99/134 (73%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           M R+  ++  VGDL   +S+  A LL SC++S+  +D RR+H RIIK QF+SEIFI +RL
Sbjct: 1   MGRHGVVQKVVGDLCFLDSSPFAKLLDSCIRSKSGIDARRIHCRIIKAQFSSEIFIQNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            D Y KC C  +A K+F  MP +NTFS+N+ILS F K G LDEA  +F+++PE DQCSWN
Sbjct: 61  VDAYGKCGCFEEARKVFVHMPLRNTFSYNAILSVFTKFGKLDEALSVFKSMPEPDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           +M+SGFAQHDRFEE
Sbjct: 121 AMVSGFAQHDRFEE 134



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/119 (27%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C       +  ++H+R+IK  +F +++ + + L D+YAKC  + +A  
Sbjct: 250 PDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAKCKRVREARL 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP ++  S  S++S +A++  +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPVRDVVSETSMVSGYARAASVKAARLMFSKMMERNVVSWNALIAGYTQNGENEE 368


>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508708193|gb|EOY00090.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 700

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/134 (57%), Positives = 101/134 (75%)
 Frame = -2

Query: 404 MARYRSIRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRL 225
           MA+   ++  VGDL LP+S+  A LL S ++S+ LLDV R+H+RI K+ FASE FIL+RL
Sbjct: 1   MAKRGLLKQIVGDLSLPDSSPFAKLLDSYIQSKSLLDVHRLHARITKSNFASETFILNRL 60

Query: 224 RDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWN 45
            D Y KC  L DA K+F++MPQ+N FSWNS ++A  K GF+DEA R+F ++ E DQCSWN
Sbjct: 61  IDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSEHDQCSWN 120

Query: 44  SMISGFAQHDRFEE 3
           S+ISGFAQ D+FEE
Sbjct: 121 SIISGFAQQDKFEE 134



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/119 (28%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     + + +++H+R++K  +   ++ + + L D+YAKC  +N+A  
Sbjct: 250 PDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAKCSRINEARC 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F++MP +N  S  S++S +AK+  +  A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 310 VFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGYTQNGEDEE 368


>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449523485|ref|XP_004168754.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/123 (56%), Positives = 89/123 (72%)
 Frame = -2

Query: 371 GDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLN 192
           GDL   +S+  + LL  C +SR   D  RVH+ IIK+ FASE FI +RL DVY KC C++
Sbjct: 12  GDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVD 71

Query: 191 DAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDR 12
            A KLF++M ++N FSWNSI+ AF KSGFLD+A  +F  +P+ DQCSWNSMISGF QH R
Sbjct: 72  VARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGR 131

Query: 11  FEE 3
           F+E
Sbjct: 132 FDE 134



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/119 (27%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     + + +++H+R++K  +F +++ + + L D+YAKC  +N+A  
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP ++  S  S++S +AK+  +  A  +F  +   D  +WN++I+G  Q+   EE
Sbjct: 310 IFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEE 368



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/127 (25%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
 Frame = -2

Query: 371 GDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLN 192
           G  +L N       L +C   + L    ++HS + ++ + S++++ S L D+Y+KC  + 
Sbjct: 144 GHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVE 203

Query: 191 DAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLF----RALPEADQCSWNSMISGFA 24
            A  +F++M  ++  SWNS+++ + ++G +DEA ++F    +   E D+ +  S++S  A
Sbjct: 204 YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACA 263

Query: 23  QHDRFEE 3
                +E
Sbjct: 264 TISAIKE 270


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329643|gb|EFH60062.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 697

 Score =  145 bits (367), Expect = 4e-33
 Identities = 68/117 (58%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
 Frame = -2

Query: 350 SAIVAGLLQSCLKSRY-LLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLF 174
           S+  A LL SC+K +   +DVR VH+ +IK+ F++E+FI +RL D YAKC  L D  +LF
Sbjct: 19  SSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLF 78

Query: 173 NKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +KMPQ+N F+WNS+++   K GFLDEAD LFR++PE DQC+WNSM+SGFAQHDR EE
Sbjct: 79  DKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 32/119 (26%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     +   + VH+R++K  +  ++I + +   D+YAKC  + +A  
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP +N  +  S++S +A +     A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/92 (34%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -2

Query: 287 RVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSG 108
           ++HS I K+   S+++I S L D+Y+KC  +NDA ++F++M  +N  SWNS+++ + ++G
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNG 232

Query: 107 FLDEADRLFRALPEA----DQCSWNSMISGFA 24
              EA ++F+ + E+    D+ +  S+IS  A
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACA 264



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P     A +L++C     L    + H  ++K  F        +IF+ + L D+Y KC C+
Sbjct: 384 PTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQ 57
            + + +F KM +++  SWN+++  FA++G+ +EA  LFR + ++ +
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGE 489


>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
           gi|557110844|gb|ESQ51135.1| hypothetical protein
           EUTSA_v10022582mg [Eutrema salsugineum]
          Length = 687

 Score =  143 bits (360), Expect = 3e-32
 Identities = 72/136 (52%), Positives = 99/136 (72%), Gaps = 2/136 (1%)
 Frame = -2

Query: 404 MARYRSIRVPVGDL-YLPNSAIVAGLLQSCLKSRYLL-DVRRVHSRIIKTQFASEIFILS 231
           MAR   +++  GDL +  +S+  + LL SC+KS+    DVR VH+ IIK+ F +E++I +
Sbjct: 1   MARKSFLKI-AGDLSFTDSSSPFSKLLDSCIKSKLSPNDVRSVHASIIKSPFFNEVYIQN 59

Query: 230 RLRDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCS 51
           RL D YAKC  L D  K+F+KMP +N ++WNS+++A AK G LDEAD LF ++PE DQC+
Sbjct: 60  RLIDAYAKCGSLEDGRKVFDKMPDRNVYTWNSLVTALAKLGLLDEADSLFMSMPERDQCT 119

Query: 50  WNSMISGFAQHDRFEE 3
           WNSM+SGFAQHDR EE
Sbjct: 120 WNSMVSGFAQHDRCEE 135



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     +   + VH R+ K  +  ++I + +   D+YAKC  + +A  
Sbjct: 251 PDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCGMIKEARF 310

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP +N  +  S++S +A +     A  +F  + E +  SWN++ISG+ Q+   EE
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWNALISGYTQNGENEE 369



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAH 183
           ++ N    A  L +C     +    ++HS + K+   S++ I S L D+Y+KC  +NDA 
Sbjct: 148 FVLNEYTFASGLSACSSLNDMNRGIQIHSLVAKSPRLSDVHIGSALVDMYSKCGNVNDAQ 207

Query: 182 KLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLF----RALPEADQCSWNSMISGFA 24
           ++F++M  +N  +WNS+++ + ++G   EA ++F    RA  E D+ +  S+IS  A
Sbjct: 208 QVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVFHVMLRASVEPDEITLASVISACA 264



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P     A +L++C     L    + H  ++K  F       ++IF+ + L D+Y KC C+
Sbjct: 384 PTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCV 443

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQ 57
            + + +F KM +++  SWN+++  FA++G+ +EA  LFR + ++ +
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRKMLDSGE 489


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score =  142 bits (357), Expect = 6e-32
 Identities = 66/118 (55%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -2

Query: 353 NSAIVAGLLQSCLKSRY-LLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKL 177
           +S+  A LL SC+KS+   + VR VH+ +IK+ F++EIFI +RL D Y+KC  L D  ++
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 176 FNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           F+KMPQ+N ++WNS+++   K GFLDEAD LFR++PE DQC+WNSM+SGFAQHDR EE
Sbjct: 78  FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAH 183
           ++ N    A +L +C     +    +VHS I K+ F S+++I S L D+Y+KC  +NDA 
Sbjct: 148 FVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ 207

Query: 182 KLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEA----DQCSWNSMISGFA 24
           ++F++M  +N  SWNS+++ F ++G   EA  +F+ + E+    D+ +  S+IS  A
Sbjct: 208 RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     +   + VH R++K  +  ++I + +   D+YAKC  + +A  
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP +N  +  S++S +A +     A  +F  + E +  SWN++I+G+ Q+   EE
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P     A +L++C     L    + H  ++K  F        +IF+ + L D+Y KC C+
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQ 57
            + + +F KM +++  SWN+++  FA++G+ +EA  LFR + E+ +
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489


>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222853423|gb|EEE90970.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 710

 Score =  135 bits (340), Expect = 6e-30
 Identities = 65/123 (52%), Positives = 87/123 (70%)
 Frame = -2

Query: 371 GDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLN 192
           G ++  +S+  A LL  C+K R   D R VH R+I+T F  E+FI +RL DVY KC  L+
Sbjct: 17  GGIFFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLD 76

Query: 191 DAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDR 12
            A K+F++M ++N FS+NSI+S   + GF+DE+  LF  +PE DQCSWNSMI+GFAQHDR
Sbjct: 77  YARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDR 136

Query: 11  FEE 3
           FEE
Sbjct: 137 FEE 139



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/121 (28%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDA 186
           + P+   +A ++ +C       +  ++H+R++K+ +F +++ + + L D+YAKC  +N+A
Sbjct: 253 FKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEA 312

Query: 185 HKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFE 6
             +F++MP +N  S  +++S +AKS  +  A  +F  + + D  SWN++I+G+ Q+   E
Sbjct: 313 RCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENE 372

Query: 5   E 3
           E
Sbjct: 373 E 373



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 IRVPVGDLYLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAK 207
           +R+   D  L + +  +GL  +C + + L    ++H  I K++++ ++F+ S L D Y+K
Sbjct: 145 VRMHRDDFVLNDYSFGSGL-SACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203

Query: 206 CCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPE----ADQCSWNSM 39
           C  +  A ++F+ M +KN  SWN +++ + ++G   EA   F  + E     D+ +  S+
Sbjct: 204 CGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263

Query: 38  ISGFAQHDRFEE 3
           +S  A    F+E
Sbjct: 264 VSACATLAAFKE 275


>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565817|gb|EOA30006.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 691

 Score =  135 bits (339), Expect = 8e-30
 Identities = 64/120 (53%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = -2

Query: 359 LPNSAIVAGLLQSCLKSRY-LLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAH 183
           L +S+  A LL SC++++    DVR VH+ I+K+ F +E FI +RL D Y KC  L+D  
Sbjct: 16  LTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGR 75

Query: 182 KLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           ++F++MP++N ++WNS+L+A  K GFLDEAD LF  +PE DQC+WNSM+SGFAQHDR EE
Sbjct: 76  QVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEE 135



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     +   + VH R++K  +  ++I + +   D+YAKC  +++A  
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARF 310

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP +N  +  S++S +A +     A  +F  + E +  SWN++ISG+ Q+   EE
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEE 369



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/92 (33%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -2

Query: 287 RVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSG 108
           ++HS I K+   S+++I S L D+Y+KC  ++DA ++F++M  +N  SWNS+++ + ++G
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNG 232

Query: 107 FLDEADRLFRALPEA----DQCSWNSMISGFA 24
              EA ++F+ + E+    D+ +  S+IS  A
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACA 264



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P     A +L++C     L    + H  ++K  F       ++IF+ + L D+Y KC C+
Sbjct: 384 PTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCV 443

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQ 57
            D + +F KM +++  SWN+++  FA++G+ +EA  LFR + ++ +
Sbjct: 444 EDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGE 489


>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565816|gb|EOA30005.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 690

 Score =  135 bits (339), Expect = 8e-30
 Identities = 64/120 (53%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = -2

Query: 359 LPNSAIVAGLLQSCLKSRY-LLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAH 183
           L +S+  A LL SC++++    DVR VH+ I+K+ F +E FI +RL D Y KC  L+D  
Sbjct: 16  LTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGR 75

Query: 182 KLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           ++F++MP++N ++WNS+L+A  K GFLDEAD LF  +PE DQC+WNSM+SGFAQHDR EE
Sbjct: 76  QVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEE 135



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDAHK 180
           P+   +A ++ +C     +   + VH R++K  +  ++I + +   D+YAKC  +++A  
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARF 310

Query: 179 LFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           +F+ MP +N  +  S++S +A +     A  +F  + E +  SWN++ISG+ Q+   EE
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEE 369



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/92 (33%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -2

Query: 287 RVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKLFNKMPQKNTFSWNSILSAFAKSG 108
           ++HS I K+   S+++I S L D+Y+KC  ++DA ++F++M  +N  SWNS+++ + ++G
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNG 232

Query: 107 FLDEADRLFRALPEA----DQCSWNSMISGFA 24
              EA ++F+ + E+    D+ +  S+IS  A
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACA 264



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFA------SEIFILSRLRDVYAKCCCL 195
           P     A +L++C     L    + H  ++K  F       ++IF+ + L D+Y KC C+
Sbjct: 384 PTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCV 443

Query: 194 NDAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQ 57
            D + +F KM +++  SWN+++  FA++G+ +EA  LFR + ++ +
Sbjct: 444 EDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGE 489


>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum tuberosum]
          Length = 709

 Score =  118 bits (295), Expect = 1e-24
 Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
 Frame = -2

Query: 368 DLY-LPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLN 192
           DL+ LPNS   A +L S + S+    ++ VH RI+KT F+SE+FI ++L D Y K   L 
Sbjct: 15  DLFSLPNSTPFAKILDSYINSKSQYVIQTVHCRILKTHFSSEVFINNKLIDTYGKSGMLK 74

Query: 191 DAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDR 12
            A K+F+KMP++NTF+WNS+++A+  S  + EA+ LF  +PE DQCSWN M+S FAQ + 
Sbjct: 75  YAKKVFDKMPERNTFTWNSMINAYTASRLVFEAEELFYLMPEPDQCSWNLMVSSFAQCEL 134

Query: 11  FE 6
           F+
Sbjct: 135 FD 136



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/121 (25%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDA 186
           + P+   +A ++ +C     + + + +H+RI+K+ +   ++ I + L D+YAK   + +A
Sbjct: 251 FKPDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGRIAEA 310

Query: 185 HKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFE 6
             +F++MP ++  S   ++S +A+   +  A  +F  + E +  SWN++I+G+ Q+   E
Sbjct: 311 RWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQNGNNE 370

Query: 5   E 3
           E
Sbjct: 371 E 371


>ref|XP_002324099.1| hypothetical protein POPTR_0017s12720g [Populus trichocarpa]
           gi|222867101|gb|EEF04232.1| hypothetical protein
           POPTR_0017s12720g [Populus trichocarpa]
          Length = 676

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/118 (45%), Positives = 81/118 (68%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKL 177
           P++++ + L+QSC+KSR L   ++VH  I  + F   +FIL+RL ++YAKC  L D+ KL
Sbjct: 68  PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL 127

Query: 176 FNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFEE 3
           F++MP+++  SWN ++S +AK G L EA  LF  +PE D  SW +MISG+ +HDR  E
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNE 185



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/95 (31%), Positives = 50/95 (52%)
 Frame = -2

Query: 356 PNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLNDAHKL 177
           PN    +G+L +C         ++VH  + +  F    F  S L  +Y+KC  +  A ++
Sbjct: 302 PNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERV 361

Query: 176 FNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRAL 72
           F + PQ + FSW S+++ +A++G  DEA R F  L
Sbjct: 362 FKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELL 396


>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum lycopersicum]
          Length = 709

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/122 (44%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
 Frame = -2

Query: 368 DLY-LPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKTQFASEIFILSRLRDVYAKCCCLN 192
           DL+ L NS   A +L S + ++    ++ VH R++KT F+SE+FI ++L D Y K   L 
Sbjct: 15  DLFTLSNSTPFAKILDSYINTKSQYVIQTVHCRVLKTHFSSEVFINNKLIDTYGKSGVLK 74

Query: 191 DAHKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDR 12
            A  +F+KMP++NTF+WNS+++A+  S  + EA+ LF  +PE DQCSWN M+S FAQ + 
Sbjct: 75  YAKNVFDKMPERNTFTWNSMMNAYTASRLVFEAEELFYMMPEPDQCSWNLMVSSFAQCEL 134

Query: 11  FE 6
           F+
Sbjct: 135 FD 136



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/121 (24%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 YLPNSAIVAGLLQSCLKSRYLLDVRRVHSRIIKT-QFASEIFILSRLRDVYAKCCCLNDA 186
           + P+   +A ++ +C     + + + +H++I+K+ +   ++ I + L D+YAK   + +A
Sbjct: 251 FKPDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGRIAEA 310

Query: 185 HKLFNKMPQKNTFSWNSILSAFAKSGFLDEADRLFRALPEADQCSWNSMISGFAQHDRFE 6
             +F++MP ++  S   ++S +A+   +  A  +F  + E +  SWN++I+G+ Q+   E
Sbjct: 311 RWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWNALIAGYTQNGNNE 370

Query: 5   E 3
           E
Sbjct: 371 E 371