BLASTX nr result
ID: Sinomenium21_contig00043590
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043590
(259 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21655.3| unnamed protein product [Vitis vinifera] 72 8e-11
ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog ... 70 3e-10
ref|XP_007045597.1| X-ray repair cross complementing 2 (XRCC2), ... 69 5e-10
ref|XP_007131677.1| hypothetical protein PHAVU_011G032400g [Phas... 67 2e-09
ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog ... 65 1e-08
ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 2e-08
ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 2e-08
ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 2e-08
ref|XP_007226152.1| hypothetical protein PRUPE_ppa014924mg, part... 62 1e-07
ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog ... 59 9e-07
ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog ... 57 2e-06
ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog ... 56 6e-06
>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNH---STFKSEWLLPSLNIFEKFVVADAGIFTVT 172
+MP +WQ F+THRIL+R +D+D +S + S F SEWL+PSLN +KF+V DAG+F V+
Sbjct: 266 FMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFIVRDAGVFVVS 325
>ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog [Fragaria vesca subsp.
vesca]
Length = 316
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLD---SSNHSTFKSEWLLPSLNIFEKFVVADAGIFTVT 172
+MP IWQ FITH+IL+R SD+ L HS + SEWLLPSL+ +KFVV DAGIF V+
Sbjct: 257 FMPPIWQSFITHKILVRASDDLLPIRLDQEHSLYFSEWLLPSLSFQDKFVVKDAGIFIVS 316
>ref|XP_007045597.1| X-ray repair cross complementing 2 (XRCC2), putative [Theobroma
cacao] gi|508709532|gb|EOY01429.1| X-ray repair cross
complementing 2 (XRCC2), putative [Theobroma cacao]
Length = 340
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNH---STFKSEWLLPSLNIFEKFVVADAGIFTVT 172
YMP++WQ F+THRIL++ +D D + H S + SEWLLP LN +KFVV D G+F ++
Sbjct: 281 YMPAVWQSFVTHRILVQATDNDFVNGEHRNVSIYLSEWLLPPLNSLDKFVVGDTGVFILS 340
>ref|XP_007131677.1| hypothetical protein PHAVU_011G032400g [Phaseolus vulgaris]
gi|561004677|gb|ESW03671.1| hypothetical protein
PHAVU_011G032400g [Phaseolus vulgaris]
Length = 317
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNH---STFKSEWLLPSLNIFEKFVVADAGIF 163
YMPS+WQ F+THRILL SDE ++NH S + EWLLP L+ +K VV DAG+F
Sbjct: 258 YMPSVWQSFVTHRILLHSSDEHPGTTNHQNSSIYSLEWLLPRLSFPDKIVVKDAGVF 314
>ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Glycine
max]
Length = 310
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDE---DLDSSNHSTFKSEWLLPSLNIFEKFVVADAGIF 163
YMPS+WQ F+THRIL+R SDE ++ N S + EWLLP L+ +K VV DAG+F
Sbjct: 251 YMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDKIVVKDAGVF 307
>ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Glycine
max] gi|571488077|ref|XP_006590831.1| PREDICTED: DNA
repair protein XRCC2 homolog isoform X3 [Glycine max]
gi|571488079|ref|XP_006590832.1| PREDICTED: DNA repair
protein XRCC2 homolog isoform X4 [Glycine max]
Length = 312
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNH---STFKSEWLLPSLNIFEKFVVADAGIF 163
YMPS+WQ F+THRIL+R SDE ++N+ S + EWLLP L+ +K VV DAG+F
Sbjct: 253 YMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPDKIVVKDAGVF 309
>ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cicer
arietinum] gi|502144799|ref|XP_004505754.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Cicer
arietinum] gi|502144801|ref|XP_004505755.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X3 [Cicer
arietinum]
Length = 328
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSS---NHSTFKSEWLLPSLNIFEKFVVADAGIF 163
YMPS+WQ F+THRIL+R SD+ +S N S F EWLLP L+ + VV DAG+F
Sbjct: 269 YMPSVWQSFVTHRILIRSSDDHSATSNCQNSSFFLLEWLLPKLSFSDTIVVKDAGVF 325
>ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Glycine
max]
Length = 264
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNH---STFKSEWLLPSLNIFEKFVVADAGIF 163
YMPS+WQ F+THRIL+R SDE ++N+ S + EWLLP L+ +K VV DAG+F
Sbjct: 205 YMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPDKIVVKDAGVF 261
>ref|XP_007226152.1| hypothetical protein PRUPE_ppa014924mg, partial [Prunus persica]
gi|462423088|gb|EMJ27351.1| hypothetical protein
PRUPE_ppa014924mg, partial [Prunus persica]
Length = 309
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDL---DSSNHSTFKSEWLLPSLNIFEKFVVAD 151
YMPS+WQ F+TH+IL+R SD+ + HS + SEWLLPS++ +KF V D
Sbjct: 257 YMPSVWQSFVTHKILVRASDDHMPIRHYEEHSVYLSEWLLPSISFRDKFTVKD 309
>ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Solanum
tuberosum] gi|565400189|ref|XP_006365614.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Solanum
tuberosum]
Length = 338
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDEDLDSSNHSTFKSEWLLPSLNIFEKFVVADAGIFTVT 172
YMPS+WQ F++HRIL+R SD D + SEWLLPSL + +KF + + G + V+
Sbjct: 283 YMPSVWQSFVSHRILVRRSD-DSKYQKKPIYLSEWLLPSLKLSDKFTINEDGAYIVS 338
>ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog [Brachypodium
distachyon]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLR----VSDEDLDSSNHSTFKSEWLLPSLNIFEKFVVADAGIFTV 169
YMPS+WQ F+THRI L+ +S E +S S SEW+ PSLNI EKF + D+G+ +
Sbjct: 276 YMPSVWQTFVTHRIKLQEESGISSEQ-ESEVLSIHTSEWVRPSLNIKEKFYIRDSGVVVI 334
>ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog [Setaria italica]
Length = 338
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +2
Query: 2 YMPSIWQLFITHRILLRVSDED---LDSSNHSTFKSEWLLPSLNIFEKFVVADAGIFTV 169
YMPSIWQ F+THRI L+ E ++ HST SEW+ PSL EKF + D G+ +
Sbjct: 279 YMPSIWQSFVTHRINLQEEAEVPSVQENGVHSTHTSEWVQPSLKTKEKFSIVDDGVILI 337