BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00043518
         (479 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001751839.1| predicted protein [Physcomitrella patens] gi...    85   1e-14
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...    82   6e-14
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...    82   8e-14
ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phas...    80   2e-13
gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...    80   2e-13
gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu]     80   3e-13
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor...    79   5e-13
gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...    79   5e-13
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s...    79   5e-13
ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prun...    79   7e-13
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps...    79   9e-13
dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   1e-12
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s...    78   1e-12
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s...    78   1e-12
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s...    78   1e-12
gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Tri...    78   1e-12
ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Sela...    77   2e-12
ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III s...    77   3e-12
gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus...    76   4e-12
ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III s...    76   6e-12

>ref|XP_001751839.1| predicted protein [Physcomitrella patens]
           gi|162696937|gb|EDQ83274.1| predicted protein
           [Physcomitrella patens]
          Length = 189

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 34/59 (57%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W Y+G ++ ++  E++RFR+  +KYPPIP+E EKDA+PFAPMAIT  I+ DGLG +AWW
Sbjct: 130 WNYNGADMFMDLEEDVRFRVVQVKYPPIPIEQEKDARPFAPMAITGDINADGLGLVAWW 188


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W Y   +  I+  +EIRF++QS+ YPPIP+E  K++KPFAPM I  S+D+DGLGP++WW
Sbjct: 134 WDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGSLDYDGLGPVSWW 192


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W Y   +  I+  +EIRF++QS+ YPPIP+E  K++KPFAPM I  S+D+DGLGP++WW
Sbjct: 134 WDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGSLDYDGLGPVSWW 192


>ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
           gi|561007160|gb|ESW06109.1| hypothetical protein
           PHAVU_010G020200g [Phaseolus vulgaris]
          Length = 215

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 30/59 (50%), Positives = 45/59 (76%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W ++  E  I+  + I+FR+Q++ YP IP+E  K++KPFAPM +T S+DHDGLGP++WW
Sbjct: 147 WDFNEQEYPIQETDVIKFRVQNVSYPQIPVEQPKESKPFAPMLVTGSLDHDGLGPVSWW 205


>gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 271

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           DGDEL ++  +EIRF + SIKYPPIP+E ++D KPFAPM I  SI  DGLG +AWW
Sbjct: 195 DGDELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 250


>gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu]
          Length = 177

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           DGDEL ++  +EIRF + SIKYPPIP+E ++D KPFAPM I  SI  DGLG IAWW
Sbjct: 99  DGDELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLIAWW 154


>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
          Length = 200

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W +   +  I+  +EIRF++ S+ YPPIP+E  K++KPFAPM IT S+D DGLGP++WW
Sbjct: 134 WEFGEQKYVIDGEDEIRFQVHSVNYPPIPVEQPKESKPFAPMVITGSLDCDGLGPVSWW 192


>gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 223

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/57 (63%), Positives = 43/57 (75%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 182
           DGDEL ++  +EIRF   SIKYPPIP+E ++D KPFAPM I  SI  DGLG +AWWV
Sbjct: 121 DGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWV 177


>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum lycopersicum]
          Length = 193

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   WLYDGDELS--IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAW 176
           W++  DEL   I+  +EIRF++ ++ YP +PLE +KD+KPFAPM I  S+D DGLGPI+W
Sbjct: 132 WIWKFDELDYPIDGIDEIRFQVHNVSYPSMPLEQDKDSKPFAPMVIKGSLDADGLGPISW 191

Query: 177 WV 182
           W+
Sbjct: 192 WI 193


>ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
           gi|462414878|gb|EMJ19615.1| hypothetical protein
           PRUPE_ppa011518mg [Prunus persica]
          Length = 207

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 30/55 (54%), Positives = 45/55 (81%)
 Frame = +3

Query: 18  DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 182
           +EL I+  ++I+F++ S+ +PPIP+E  +D+KPFAPM +T SID DGLGP++WWV
Sbjct: 141 EELVIDGIDQIKFQVHSVNFPPIPIEQPEDSKPFAPMVVTGSIDFDGLGPVSWWV 195


>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
           gi|482574626|gb|EOA38813.1| hypothetical protein
           CARUB_v10011131mg [Capsella rubella]
          Length = 199

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 30/59 (50%), Positives = 45/59 (76%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W+++G E  I++  +I+FR++ I YP +P+E  +DAKPFAPM IT +ID DGLG ++WW
Sbjct: 134 WVFEGQEYIIDDSCQIKFRVEGISYPSVPIERAEDAKPFAPMVITGNIDDDGLGLVSWW 192


>dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           DGDEL ++  +EIRF + SIKYPPIP+E ++D +PFAPM I  SI  DGLG +AWW
Sbjct: 132 DGDELPLDIDDEIRFLVSSIKYPPIPVEQKEDDRPFAPMQINGSIKGDGLGLLAWW 187


>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum tuberosum]
          Length = 193

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   WLYDGDELS--IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAW 176
           W++  DEL   I+  +EIRF++ ++ YP +PLE +KD+ PFAPM I  S+D DGLGPI+W
Sbjct: 132 WIWKFDELDYPIDGVDEIRFQVHNVSYPSMPLEQDKDSNPFAPMVIKGSLDADGLGPISW 191

Query: 177 WV 182
           W+
Sbjct: 192 WI 193


>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Cicer arietinum]
           gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Cicer
           arietinum]
          Length = 196

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
 Frame = +3

Query: 3   WLYD-----GDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGP 167
           W +D     G    I++ +EI+F++QS+ YPPIP+E  K++KPFAPM +  S+D DGLGP
Sbjct: 133 WFWDFKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLVYGSLDQDGLGP 192

Query: 168 IAWW 179
           ++WW
Sbjct: 193 VSWW 196


>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
           arietinum]
          Length = 196

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
 Frame = +3

Query: 3   WLYD-----GDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGP 167
           W +D     G    I++ +EI+F++QS+ YPPIP+E  K++KPFAPM +  S+D DGLGP
Sbjct: 133 WFWDYKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLVYGSLDQDGLGP 192

Query: 168 IAWW 179
           ++WW
Sbjct: 193 VSWW 196


>gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Triticum urartu]
          Length = 200

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           DGDEL ++  +EIRF   SIKYPPIP+E ++D KPFAPM I  SI  DGLG +AWW
Sbjct: 120 DGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 175


>ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Selaginella moellendorffii]
           gi|300143291|gb|EFJ09983.1| hypothetical protein
           SELMODRAFT_128885 [Selaginella moellendorffii]
          Length = 187

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 30/59 (50%), Positives = 44/59 (74%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           W Y  +E+ ++  EE+RFR+  ++YPPIPLE E+DA+PFAPM +   I+ DGLG ++WW
Sbjct: 129 WNYQENEMFMDLEEEVRFRVLKVRYPPIPLEQERDAQPFAPMEVIGDINSDGLGLVSWW 187


>ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           DGDEL ++  +EIRF +  IKYPPIP+E ++D KPFAPM I  SI  DGLG +AWW
Sbjct: 132 DGDELYLDIDDEIRFLVSGIKYPPIPVEQKEDDKPFAPMQIIGSIKGDGLGLLAWW 187


>gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus guttatus]
          Length = 199

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
 Frame = +3

Query: 3   WLYDGDELSIENGEEIRFRIQSIKYPPIPLE------PEK-DAKPFAPMAITASIDHDGL 161
           W Y  D L+I+  +EIRF++ S+ Y PIP+E      PEK D+KPFAPM +  SID DGL
Sbjct: 134 WNYHADPLTIDWTDEIRFKVHSVNYHPIPVEQGDDDDPEKKDSKPFAPMVVIGSIDDDGL 193

Query: 162 GPIAWW 179
           GP++WW
Sbjct: 194 GPVSWW 199


>ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +3

Query: 12  DGDELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 179
           D DEL ++  +EIRF + SIKYPPIP+E ++D KPFAPM I  SI  DGLG +AWW
Sbjct: 132 DDDELYLDLDDEIRFLVASIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 187