BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00043450
         (438 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containi...   175   5e-42
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,...   157   2e-36
ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily p...   152   4e-35
ref|NP_193153.3| pentatricopeptide repeat-containing protein [Ar...   139   5e-31
gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|A...   139   5e-31
emb|CAB10196.1| hypothetical protein [Arabidopsis thaliana] gi|7...   138   7e-31
ref|XP_006836230.1| hypothetical protein AMTR_s00101p00112120 [A...   137   1e-30
ref|XP_006283664.1| hypothetical protein CARUB_v10004721mg [Caps...   137   2e-30
ref|XP_002868306.1| pentatricopeptide repeat-containing protein ...   134   2e-29
ref|XP_006414782.1| hypothetical protein EUTSA_v10027059mg [Eutr...   123   3e-26
ref|XP_006851313.1| hypothetical protein AMTR_s00050p00182320 [A...    95   1e-17
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...    94   2e-17
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_006851319.1| hypothetical protein AMTR_s00050p00185440 [A...    93   4e-17
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
emb|CBI36131.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat...    92   8e-17
ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfam...    92   8e-17
ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [A...    92   1e-16
ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prun...    92   1e-16

>ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14170-like [Vitis vinifera]
          Length = 455

 Score =  175 bits (444), Expect = 5e-42
 Identities = 89/145 (61%), Positives = 105/145 (72%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NV+LSSKL+ MYS   KL  ++ SVF+HMP+RNI+SWNI
Sbjct: 21  SPNPTHLRHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHSLSVFLHMPHRNIYSWNI 80

Query: 182 IIASFSRSSFPERSIHSFLQMRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLG 361
           II  FSRS  P +SI  FLQMR+F   PDVFTLPLVLRACA SG+V  GVSVHGLCV++G
Sbjct: 81  IIGEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHGLCVEMG 140

Query: 362 FEKNLFVASALVFMYVTMGKICSAQ 436
            EK+LFVASALVFMYVT GK+  A+
Sbjct: 141 MEKSLFVASALVFMYVTFGKVLDAR 165



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/115 (31%), Positives = 59/115 (51%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           ++ ++S LV MY    K+L  A  +F  MP R+   W  ++A +++   P  ++  F QM
Sbjct: 144 SLFVASALVFMYVTFGKVLD-ARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQM 202

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYV 409
            + G+A D   +  +L AC   G +  G SVHG   +      L + +ALV+ YV
Sbjct: 203 VSAGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYV 257


>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 488

 Score =  157 bits (396), Expect = 2e-36
 Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
 Frame = +2

Query: 59  YNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFL 238
           Y+NVVLSSKLV MYSHHN+L  ++ S F HMP +NI+SWNIII  F+RS+ PE+S+  F+
Sbjct: 66  YDNVVLSSKLVLMYSHHNRLTPHSLSTFFHMPCKNIYSWNIIIGEFARSNLPEKSVDLFI 125

Query: 239 QM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTM 415
            M R+    PD F+LPLVLRACAGSG    G SVHGLCVK+G   +LFV SALVFMYVT 
Sbjct: 126 DMRRDSHFQPDDFSLPLVLRACAGSGLGKLGSSVHGLCVKMGLAVSLFVGSALVFMYVTF 185

Query: 416 GKICSAQ 436
           G + +A+
Sbjct: 186 GNVSNAR 192


>ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508710251|gb|EOY02148.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 478

 Score =  152 bits (385), Expect = 4e-35
 Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y++V+LSSKLV  YS HNKL S + SVF HMP +NI+SWNI
Sbjct: 33  SPNCKHLRHLHARLLRTSLYDDVILSSKLVLAYSQHNKLTSDSLSVFFHMPQKNIYSWNI 92

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKL 358
           II  FSRS+FP ++I  FL+M ++  + PD FTLPLVLR+C   G V+  VS HGLCVK+
Sbjct: 93  IIGEFSRSNFPLKAIDLFLRMWQSSDVRPDDFTLPLVLRSCVSCGLVELAVSFHGLCVKM 152

Query: 359 GFEKNLFVASALVFMYVTMGKICSAQ 436
           G E +LFVASALVF+YV+ GK+  A+
Sbjct: 153 GLESSLFVASALVFLYVSSGKVYDAR 178



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +2

Query: 62  NNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQ 241
           +++ ++S LV +Y    K+   A  +F  MP ++   W  ++  +++   P   +  F +
Sbjct: 156 SSLFVASALVFLYVSSGKVYD-ARVLFDGMPKKDAVLWTAMLDGYAKHEEPMLGLELFRE 214

Query: 242 MRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVK--LGFEKNLFVASALVFMYVTM 415
           M + G+APD   +  +L  C   G +  G SVHG CV+  LG E NL   +A+V MY+  
Sbjct: 215 MVDAGVAPDWVVMLSLLLVCGQLGWLKQGKSVHGWCVRRCLGMELNL--GNAIVDMYLKC 272

Query: 416 GKICSA 433
             +  A
Sbjct: 273 ATLAYA 278


>ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14170 gi|332657989|gb|AEE83389.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score =  139 bits (349), Expect = 5e-31
 Identities = 78/146 (53%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NVVLSSKLV  YS  N L   + SVF HMP RNIFSWNI
Sbjct: 44  SPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNI 103

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKL 358
           II  FSRS F  +SI  FL+M R   + PD FTLPL+LRAC+ S    +G  +H LC+KL
Sbjct: 104 IIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKL 163

Query: 359 GFEKNLFVASALVFMYVTMGKICSAQ 436
           GF  +LFV+SALV MYV MGK+  A+
Sbjct: 164 GFSSSLFVSSALVIMYVDMGKLLHAR 189


>gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|AAV59277.1|
           At4g14170 [Arabidopsis thaliana]
          Length = 458

 Score =  139 bits (349), Expect = 5e-31
 Identities = 78/146 (53%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NVVLSSKLV  YS  N L   + SVF HMP RNIFSWNI
Sbjct: 25  SPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNI 84

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKL 358
           II  FSRS F  +SI  FL+M R   + PD FTLPL+LRAC+ S    +G  +H LC+KL
Sbjct: 85  IIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKL 144

Query: 359 GFEKNLFVASALVFMYVTMGKICSAQ 436
           GF  +LFV+SALV MYV MGK+  A+
Sbjct: 145 GFSSSLFVSSALVIMYVDMGKLLHAR 170


>emb|CAB10196.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268122|emb|CAB78459.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 428

 Score =  138 bits (348), Expect = 7e-31
 Identities = 78/145 (53%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NVVLSSKLV  YS  N L   + SVF HMP RNIFSWNI
Sbjct: 25  SPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNI 84

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKL 358
           II  FSRS F  +SI  FL+M R   + PD FTLPL+LRAC+ S    +G  +H LC+KL
Sbjct: 85  IIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKL 144

Query: 359 GFEKNLFVASALVFMYVTMGKICSA 433
           GF  +LFV+SALV MYV MGK+  A
Sbjct: 145 GFSSSLFVSSALVIMYVDMGKLLHA 169


>ref|XP_006836230.1| hypothetical protein AMTR_s00101p00112120 [Amborella trichopoda]
           gi|548838730|gb|ERM99083.1| hypothetical protein
           AMTR_s00101p00112120 [Amborella trichopoda]
          Length = 207

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/144 (47%), Positives = 90/144 (62%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                YN+V+L+SKL+ MYS H  L   A+++F+HMP RNI+SWNI
Sbjct: 47  SPNLQILQQIHAKLLKTSVYNDVILNSKLIIMYSKHKSLFPNAYNLFLHMPERNIYSWNI 106

Query: 182 IIASFSRSSFPERSIHSFLQMRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLG 361
           II   SRS +P ++I +F  MR   + PD++TLPLVLRACA  G    G  +H  C K+G
Sbjct: 107 IIGELSRSGYPLKAIETFKNMRKSRMEPDLYTLPLVLRACATLGQFKPGQKLHCYCEKVG 166

Query: 362 FEKNLFVASALVFMYVTMGKICSA 433
             +N+FVASALVF Y   G+I +A
Sbjct: 167 SSRNVFVASALVFFYAKFGEIDAA 190


>ref|XP_006283664.1| hypothetical protein CARUB_v10004721mg [Capsella rubella]
           gi|482552369|gb|EOA16562.1| hypothetical protein
           CARUB_v10004721mg [Capsella rubella]
          Length = 477

 Score =  137 bits (344), Expect = 2e-30
 Identities = 79/146 (54%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NVVLSSKLV  YS  N+L   + SVF HMP RNIFSWNI
Sbjct: 44  SPNAKHLRHLHAHLLRTSLYSNVVLSSKLVLAYSKLNRLFPTSLSVFWHMPCRNIFSWNI 103

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKL 358
           II  FSRS F   SI  FL+M R   + PD FTLPLVLRAC+ S     G  +H LC+KL
Sbjct: 104 IIGEFSRSGFASVSIDLFLRMWRESYVRPDDFTLPLVLRACSASREAKLGDLIHVLCLKL 163

Query: 359 GFEKNLFVASALVFMYVTMGKICSAQ 436
           GF  +LFV+SALV MYV MG+I +A+
Sbjct: 164 GFNASLFVSSALVIMYVDMGEIINAR 189


>ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314142|gb|EFH44565.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score =  134 bits (336), Expect = 2e-29
 Identities = 75/127 (59%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = +2

Query: 59  YNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFL 238
           Y+NVVLSSKLV  YS  N L   + SVF HMP RNIFSWNIII  FSRS F   SI  FL
Sbjct: 44  YSNVVLSSKLVLAYSKMNHLFPTSLSVFWHMPCRNIFSWNIIIGEFSRSGFASISIGMFL 103

Query: 239 QM-RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTM 415
           +M R   + PD FTLPLVLRAC+ S     G  +H LC+KLGF  +LFV SALV MYV +
Sbjct: 104 RMWRESNVRPDDFTLPLVLRACSASREAKFGDLIHVLCLKLGFNASLFVRSALVIMYVDL 163

Query: 416 GKICSAQ 436
           G+I  A+
Sbjct: 164 GEILHAR 170


>ref|XP_006414782.1| hypothetical protein EUTSA_v10027059mg [Eutrema salsugineum]
           gi|557115952|gb|ESQ56235.1| hypothetical protein
           EUTSA_v10027059mg [Eutrema salsugineum]
          Length = 472

 Score =  123 bits (308), Expect = 3e-26
 Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
 Frame = +2

Query: 2   SPNXXXXXXXXXXXXXXXXYNNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNI 181
           SPN                Y+NVVLSSKLV  YS  + L   + +VF HMP+RNIFSWNI
Sbjct: 38  SPNAKHLRHLHAHLLRTSTYSNVVLSSKLVLAYSKLDHLFPTSLAVFWHMPHRNIFSWNI 97

Query: 182 IIASFSRSSFPERSIHSFLQM-RNFGLAPDVFTLPLVLRACAGS-GAVDTGVSVHGLCVK 355
           II  FSRS F   SI  FL+M R   + PD FTLPL+LRAC+ S      G  +H L +K
Sbjct: 98  IIGEFSRSGFAAESIGLFLRMWRESSVRPDDFTLPLLLRACSASPEEAKLGDLIHSLSLK 157

Query: 356 LGFEKNLFVASALVFMYVTMGKICSAQ 436
           LGF  +LFV+SALV MYV + KI  A+
Sbjct: 158 LGFGASLFVSSALVIMYVDIKKISDAR 184


>ref|XP_006851313.1| hypothetical protein AMTR_s00050p00182320 [Amborella trichopoda]
           gi|548855002|gb|ERN12894.1| hypothetical protein
           AMTR_s00050p00182320 [Amborella trichopoda]
          Length = 195

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 43/90 (47%), Positives = 58/90 (64%)
 Frame = +2

Query: 149 MPNRNIFSWNIIIASFSRSSFPERSIHSFLQMRNFGLAPDVFTLPLVLRACAGSGAVDTG 328
           MP +N+ SWN +I+  ++  F E  +H F +MRN GL PD FTL   L+ C+G GA+  G
Sbjct: 1   MPEKNLVSWNAVISGLTQHGFHENGLHYFSEMRNSGLIPDQFTLGSALKGCSGIGALKLG 60

Query: 329 VSVHGLCVKLGFEKNLFVASALVFMYVTMG 418
             +HG  VKLGF+ NLFV S+L  MY+  G
Sbjct: 61  QQIHGNTVKLGFQSNLFVGSSLSHMYMKCG 90


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/123 (38%), Positives = 79/123 (64%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           N  L++KLV +Y+  N LL+ A ++F  +P +N+F WN++I  ++ +   + +I  + +M
Sbjct: 81  NQDLATKLVHLYAVSNSLLN-ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKM 139

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
            ++GL PD FTLP VL+AC+   A+  G S+H   +K G+E++LFV +AL+ MY   G +
Sbjct: 140 LDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCV 199

Query: 425 CSA 433
             A
Sbjct: 200 MDA 202


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 47/124 (37%), Positives = 78/124 (62%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           N +L++KLV++Y   N L + AH +F  +  RN+F WN++I  ++ +   E +I  + QM
Sbjct: 35  NPLLATKLVNLYCICNSLTN-AHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQM 93

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
           R++GL PD FT P VL+AC+   A++ G  +H   ++ G E ++FV +AL+ MY   G +
Sbjct: 94  RDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCV 153

Query: 425 CSAQ 436
            SA+
Sbjct: 154 ESAR 157



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/121 (29%), Positives = 63/121 (52%)
 Frame = +2

Query: 62  NNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQ 241
           ++V + + L+ MY+    + S A  VF  +  R++  WN ++A++S++  P+ S+     
Sbjct: 135 SDVFVGAALIDMYAKCGCVES-ARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRV 193

Query: 242 MRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGK 421
           M   GL P   T  + + A A +G +  G  +HG   + GFE N  V +AL+ MY   G 
Sbjct: 194 MAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGS 253

Query: 422 I 424
           +
Sbjct: 254 V 254


>ref|XP_006851319.1| hypothetical protein AMTR_s00050p00185440 [Amborella trichopoda]
           gi|548855008|gb|ERN12900.1| hypothetical protein
           AMTR_s00050p00185440 [Amborella trichopoda]
          Length = 345

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/118 (39%), Positives = 70/118 (59%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           N +  + L++ +S   +L   +  +F  MP +N+ SWN +I+  ++  F E  +H F +M
Sbjct: 134 NTMSFNILINGFSQKGELC-LSLKLFDKMPEKNLASWNAVISGLTQHGFHENGLHYFSEM 192

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMG 418
           RN GL PD FTL   L+ C+G  A+  G  +HG  VKLGF+ NLFV S+L  MY+  G
Sbjct: 193 RNSGLIPDQFTLGSALKGCSGIRALKLGQQIHGNTVKLGFQSNLFVGSSLSHMYMKCG 250


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/124 (37%), Positives = 78/124 (62%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           + V+++KLV++Y   + L S A  +F  +P  NIF WN++I  ++ +   E ++  + QM
Sbjct: 109 DTVIATKLVNLYCVCDSLSS-ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
            ++GL PD FT P VL+ACA   A++ G  +H   V+ G+EK++FV +AL+ MY   G +
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227

Query: 425 CSAQ 436
            SA+
Sbjct: 228 GSAR 231


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/124 (37%), Positives = 78/124 (62%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           + V+++KLV++Y   + L S A  +F  +P  NIF WN++I  ++ +   E ++  + QM
Sbjct: 109 DTVIATKLVNLYCVCDSLSS-ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
            ++GL PD FT P VL+ACA   A++ G  +H   V+ G+EK++FV +AL+ MY   G +
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227

Query: 425 CSAQ 436
            SA+
Sbjct: 228 GSAR 231


>ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 640

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 47/124 (37%), Positives = 77/124 (62%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           N+ L++KLV+ YS  N L + AH +F  +P  N+F WN++I +++ +   E +I  + QM
Sbjct: 101 NLDLATKLVNFYSVCNSLRN-AHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM 159

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
             +GL PD FTLP VL+AC+    +  G  +H   ++ G+E+++FV +ALV MY   G +
Sbjct: 160 LEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCV 219

Query: 425 CSAQ 436
             A+
Sbjct: 220 VDAR 223



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/120 (27%), Positives = 62/120 (51%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           +V + + LV MY+    ++   H VF  + +R+   WN ++A+++++  P+ S+    +M
Sbjct: 202 DVFVGAALVDMYAKCGCVVDARH-VFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEM 260

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKI 424
              G+ P   TL  V+ + A    +  G  +HG   + GF+ N  V +AL+ MY   G +
Sbjct: 261 AAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSV 320


>ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590623325|ref|XP_007025292.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623329|ref|XP_007025293.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590623333|ref|XP_007025294.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623336|ref|XP_007025295.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780657|gb|EOY27913.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780658|gb|EOY27914.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780659|gb|EOY27915.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780660|gb|EOY27916.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780661|gb|EOY27917.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 535

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
 Frame = +2

Query: 59  YNNVVLSSKLVSMYSHHN--KLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHS 232
           YN+ + S+KL+S   ++   K LSYAHSVF H  N N +S+N +I +++ S  P+ ++  
Sbjct: 37  YNHPLASNKLISFAVNNPDPKTLSYAHSVFTHTTNPNSYSYNSLIRAYANSHTPQNALSL 96

Query: 233 FLQMRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMY 406
           F QM    + PD ++   VL+ACAG G V  G  +HGL +++G   ++FVA+ L+ +Y
Sbjct: 97  FRQMLQGPVFPDKYSFTFVLKACAGFGGVQEGRQIHGLVLRMGIGFDVFVANTLIHVY 154



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/106 (36%), Positives = 54/106 (50%)
 Frame = +2

Query: 116 LLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQMRNFGLAPDVFTLPLVLR 295
           L+  A SVF  MP +N+ SWN +I  ++ +S     +  F  M+   + PD  TL  VL 
Sbjct: 221 LVEEARSVFYRMPVKNVVSWNALITGYAHTSCFGEVLVLFEDMQREKVKPDNCTLVNVLS 280

Query: 296 ACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKICSA 433
           ACA  GA+  G  +H    K     N ++A+ALV MY   G I  A
Sbjct: 281 ACAHLGALGQGEWIHSYIDKNAIGINGYIATALVDMYSKCGNIDKA 326


>ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [Amborella trichopoda]
           gi|548861723|gb|ERN19094.1| hypothetical protein
           AMTR_s00061p00127300 [Amborella trichopoda]
          Length = 430

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/122 (35%), Positives = 75/122 (61%)
 Frame = +2

Query: 68  VVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQMR 247
           +  ++K ++  S  N+L +YA  +F  +P R+ F WN +I S+S+ S+ E+++  +++M+
Sbjct: 162 IFFAAKFINACSKFNEL-NYACQIFSEIPQRSSFLWNAMIRSYSQHSYYEKTLELYVKMQ 220

Query: 248 NFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGKIC 427
             G+ PD FTLP VL+ C G   ++ G  +H    +LGFE ++FV + LV MY    ++C
Sbjct: 221 EEGVRPDGFTLPCVLKVCTGLSDLNVGRELHAQIFRLGFESDVFVQNGLVAMYSKHSQLC 280

Query: 428 SA 433
            A
Sbjct: 281 KA 282



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/120 (30%), Positives = 69/120 (57%)
 Frame = +2

Query: 62  NNVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQ 241
           ++V + + LV+MYS H++L   A S+F  + ++++ SW  II+ ++++ FP +++  F +
Sbjct: 261 SDVFVQNGLVAMYSKHSQLCK-AFSIFERIHSKSVVSWTSIISGYAQNGFPYKALQIFRE 319

Query: 242 MRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMGK 421
           M+     PD  +L   L+A     ++D G+ VHG  +K+G E    +  AL  MY   G+
Sbjct: 320 MKRSSTEPDFISLVSALKAYTDIESLDQGMCVHGCAIKIGLETEPDLLIALTAMYAKCGE 379


>ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
           gi|462415781|gb|EMJ20518.1| hypothetical protein
           PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNI--FSWNIIIASFSRSSFPERSIHSFL 238
           NV +SSKL+ +Y+ H   +  AH VF  MP R++  F+WN +I+ ++     E ++  + 
Sbjct: 118 NVGISSKLLRLYASHG-YIEEAHQVFDEMPKRDVSAFAWNSLISGYAELGLYEDAMALYF 176

Query: 239 QMRNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTMG 418
           QM   G+ PD FT P VL+AC G G +  G +VH   V+LG   + FV +ALV MY   G
Sbjct: 177 QMEEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCG 236

Query: 419 KICSAQ 436
            I  A+
Sbjct: 237 DIVKAR 242



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = +2

Query: 65  NVVLSSKLVSMYSHHNKLLSYAHSVFIHMPNRNIFSWNIIIASFSRSSFPERSIHSFLQM 244
           N+ +++ L++ YS+H KL + A  +F HM  R++ +WN +I++ S+S  PE ++  F QM
Sbjct: 320 NLSIANALIAAYSNHRKL-NRARWLFCHMSERDVITWNTMISAHSKS--PE-ALLFFEQM 375

Query: 245 RNFGLAPDVFTLPLVLRACAGSGAVDTGVSVHGLCVKLGFEKNLFVASALVFMYVTM 415
            + G  PD  T   +L  CA  G V  G  ++ +       KN +  S ++  Y  M
Sbjct: 376 ESSGALPDSITFVSILSTCAHLGLVKDGERLYSVM------KNRYRISPIMEHYACM 426