BLASTX nr result
ID: Sinomenium21_contig00043394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043394
(295 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat... 86 4e-15
ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat... 86 5e-15
ref|XP_007011398.1| Pentatricopeptide repeat superfamily protein... 84 2e-14
ref|XP_007011397.1| Pentatricopeptide repeat superfamily protein... 84 2e-14
gb|EYU21206.1| hypothetical protein MIMGU_mgv11b002092mg [Mimulu... 79 7e-13
gb|EPS62215.1| hypothetical protein M569_12574, partial [Genlise... 77 2e-12
ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat... 76 4e-12
ref|XP_006436351.1| hypothetical protein CICLE_v10033432mg [Citr... 76 4e-12
ref|XP_006436328.1| hypothetical protein CICLE_v10033582mg [Citr... 76 4e-12
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat... 76 4e-12
ref|XP_007150840.1| hypothetical protein PHAVU_005G185300g [Phas... 75 1e-11
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_006601680.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_006603851.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-11
ref|XP_006855066.1| hypothetical protein AMTR_s00031p00119810 [A... 70 3e-10
ref|XP_006601682.1| PREDICTED: putative pentatricopeptide repeat... 68 2e-09
ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
ref|XP_006416774.1| hypothetical protein EUTSA_v10007086mg [Eutr... 66 4e-09
ref|NP_173127.4| pentatricopeptide repeat-containing protein [Ar... 65 1e-08
>ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Solanum lycopersicum]
Length = 715
Score = 86.3 bits (212), Expect = 4e-15
Identities = 46/98 (46%), Positives = 55/98 (56%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGF QM +A +LN +ES GC+PDLVL NVLI CLSKMGR+ DA+ F L +
Sbjct: 305 TSLIKGFFESQMPSKAFGILNTMESKGCSPDLVLCNVLIHCLSKMGRYEDAINAFFLLRE 364
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
+ L PDSY P L GF + D
Sbjct: 365 QRLSPDSYTLCSLITTVCLSKQFVELPLLITGFKIQPD 402
>ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Solanum tuberosum]
gi|565399483|ref|XP_006365280.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X2 [Solanum tuberosum]
Length = 657
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/98 (46%), Positives = 56/98 (57%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGF QM +A +L+ +ES GC+PDLVL NVLIDCLSKMGR+ DA+ F L +
Sbjct: 305 TSLIKGFFESQMPSKAFGILDTMESKGCSPDLVLCNVLIDCLSKMGRYEDAINAFFLLRE 364
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
+ L PDSY P L GF + D
Sbjct: 365 QRLIPDSYTLCSLITTVCLSKQFVELPLLITGFKIQPD 402
>ref|XP_007011398.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
[Theobroma cacao] gi|508728311|gb|EOY20208.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 657
Score = 84.3 bits (207), Expect = 2e-14
Identities = 44/98 (44%), Positives = 58/98 (59%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+LIKGF+ QM A S+LN +ES G PDL+L NVLIDCLSK+GR++DA VF++L +
Sbjct: 299 TTLIKGFLDSQMVSTAFSILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVFVSLPE 358
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
R L PDSY P + +G + D
Sbjct: 359 RKLLPDSYTFCSLLSNICLSRRFSLLPKIASGLAIEGD 396
>ref|XP_007011397.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|508728310|gb|EOY20207.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 695
Score = 84.3 bits (207), Expect = 2e-14
Identities = 44/98 (44%), Positives = 58/98 (59%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+LIKGF+ QM A S+LN +ES G PDL+L NVLIDCLSK+GR++DA VF++L +
Sbjct: 337 TTLIKGFLDSQMVSTAFSILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVFVSLPE 396
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
R L PDSY P + +G + D
Sbjct: 397 RKLLPDSYTFCSLLSNICLSRRFSLLPKIASGLAIEGD 434
>gb|EYU21206.1| hypothetical protein MIMGU_mgv11b002092mg [Mimulus guttatus]
Length = 655
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/98 (43%), Positives = 56/98 (57%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T +IKGFM +M +A +L ++S GC PDLVL NVLIDCLSKMG ++DA VF +L +
Sbjct: 307 TPMIKGFMESRMPAKAFEILGALKSKGCFPDLVLCNVLIDCLSKMGWYDDAFEVFSSLRE 366
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
R L PD+Y P L +GF + D
Sbjct: 367 RRLMPDAYTYSSIVSTICLSGQYVLLPFLTSGFAVQPD 404
>gb|EPS62215.1| hypothetical protein M569_12574, partial [Genlisea aurea]
Length = 450
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKG + M +A +L +ES GCAPDLVL NVLIDCLSKMG + DAL VF L +
Sbjct: 247 TSLIKGHLESHMPAKAFEILGILESKGCAPDLVLCNVLIDCLSKMGWYRDALLVFSGLRE 306
Query: 182 RNLEPDSY 205
R + PD+Y
Sbjct: 307 RRMAPDAY 314
>ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Citrus sinensis]
gi|568821338|ref|XP_006465138.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X2 [Citrus sinensis]
gi|568821340|ref|XP_006465139.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X3 [Citrus sinensis]
Length = 645
Score = 76.3 bits (186), Expect = 4e-12
Identities = 47/98 (47%), Positives = 55/98 (56%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGFM +MF A S L+ +ES G APDLV NVLIDCLSKMG ++DAL V+ L +
Sbjct: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
L PDSY P L G + AD
Sbjct: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
>ref|XP_006436351.1| hypothetical protein CICLE_v10033432mg [Citrus clementina]
gi|557538547|gb|ESR49591.1| hypothetical protein
CICLE_v10033432mg [Citrus clementina]
Length = 512
Score = 76.3 bits (186), Expect = 4e-12
Identities = 47/98 (47%), Positives = 55/98 (56%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGFM +MF A S L+ +ES G APDLV NVLIDCLSKMG ++DAL V+ L +
Sbjct: 161 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 220
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
L PDSY P L G + AD
Sbjct: 221 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 258
>ref|XP_006436328.1| hypothetical protein CICLE_v10033582mg [Citrus clementina]
gi|557538524|gb|ESR49568.1| hypothetical protein
CICLE_v10033582mg [Citrus clementina]
Length = 512
Score = 76.3 bits (186), Expect = 4e-12
Identities = 47/98 (47%), Positives = 55/98 (56%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGFM +MF A S L+ +ES G APDLV NVLIDCLSKMG ++DAL V+ L +
Sbjct: 161 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 220
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
L PDSY P L G + AD
Sbjct: 221 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 258
>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
unnamed protein product [Vitis vinifera]
Length = 659
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+LIKGFM M RA+ VL + + GC DLVL NVLIDCLSK+GR++DAL +F +L +
Sbjct: 300 TTLIKGFMESGMVSRALDVLRIMGTKGCDYDLVLYNVLIDCLSKVGRYDDALGIFFSLPK 359
Query: 182 RNLEPDSY 205
R + PDSY
Sbjct: 360 RKMVPDSY 367
>ref|XP_007150840.1| hypothetical protein PHAVU_005G185300g [Phaseolus vulgaris]
gi|561024104|gb|ESW22834.1| hypothetical protein
PHAVU_005G185300g [Phaseolus vulgaris]
Length = 653
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+L K F+ M A + N + S G PDLVLSNVLIDCLSK GR DA+ VFL+LS
Sbjct: 296 TTLFKAFIQSNMLTHAFRLYNAMLSTGQIPDLVLSNVLIDCLSKAGRCRDAIRVFLSLST 355
Query: 182 RNLEPDSY 205
RN++PDSY
Sbjct: 356 RNIKPDSY 363
>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 525
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/98 (41%), Positives = 57/98 (58%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+LIKG++ Q A VL+ +ES G +PDL+L NVLID L+K R+NDAL +FL+L +
Sbjct: 214 TTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHK 273
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
RN+ PD Y P L +GF++ D
Sbjct: 274 RNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVD 311
>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 665
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/98 (41%), Positives = 57/98 (58%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T+LIKG++ Q A VL+ +ES G +PDL+L NVLID L+K R+NDAL +FL+L +
Sbjct: 306 TTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHK 365
Query: 182 RNLEPDSYXXXXXXXXXXXXXXXXXXPHLFNGFVLSAD 295
RN+ PD Y P L +GF++ D
Sbjct: 366 RNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVD 403
>ref|XP_006601680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Glycine max]
Length = 643
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T L K FM M A + N + S G +PDL+L NVLIDCLSK GR DA+ VFL+LS+
Sbjct: 286 TILFKAFMQSNMPSPAFRLFNVMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSE 345
Query: 182 RNLEPDSY 205
RNL+PDSY
Sbjct: 346 RNLKPDSY 353
>ref|XP_006603851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Glycine max]
Length = 599
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T L K FM M A + N + S G +PDL+L NVLIDCLSK GR DA+ VFL+LS+
Sbjct: 286 TILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSE 345
Query: 182 RNLEPDSY 205
RNL+PDSY
Sbjct: 346 RNLKPDSY 353
>ref|XP_006855066.1| hypothetical protein AMTR_s00031p00119810 [Amborella trichopoda]
gi|548858795|gb|ERN16533.1| hypothetical protein
AMTR_s00031p00119810 [Amborella trichopoda]
Length = 669
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TS+I G MFD+A+ V N +E+ PDL+ N+LI C K+GR+ DAL++F L +
Sbjct: 320 TSIIHGLFQANMFDQALDVWNSMEAKRFVPDLICYNILIHCFCKVGRYGDALHLFHELRR 379
Query: 182 RNLEPDSY 205
RNL+PDSY
Sbjct: 380 RNLQPDSY 387
>ref|XP_006601682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Glycine max]
Length = 270
Score = 67.8 bits (164), Expect = 2e-09
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 47 AISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQRNLEPDSY 205
A + N + S G +PDL+L NVLIDCLSK GR DA+ VFL+LS+RNL+PDSY
Sbjct: 5 AFRLFNVMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSY 57
>ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Setaria italica]
Length = 631
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/68 (42%), Positives = 47/68 (69%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
T L+KGF+ M D A +L + S GC+PD+V+ NVL+DC+ K R++DAL +++ +
Sbjct: 279 TPLLKGFLRAGMHDLASELLGSMVSAGCSPDIVMYNVLMDCMVKARRYDDALDIYMQIHG 338
Query: 182 RNLEPDSY 205
R ++PD+Y
Sbjct: 339 RQIQPDAY 346
>ref|XP_006416774.1| hypothetical protein EUTSA_v10007086mg [Eutrema salsugineum]
gi|557094545|gb|ESQ35127.1| hypothetical protein
EUTSA_v10007086mg [Eutrema salsugineum]
Length = 620
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGFM M D A SVL+ V+S G APD+VL NV+I +++GR +A VF +L +
Sbjct: 300 TSLIKGFMDFGMVDEAFSVLSTVQSKGLAPDIVLCNVMIHTFTRLGRFEEARNVFTSLKK 359
Query: 182 RNLEPDSY 205
R L D Y
Sbjct: 360 RKLVADRY 367
>ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g16830 gi|332191383|gb|AEE29504.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 608
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2
Query: 2 TSLIKGFMG*QMFDRAISVLNDVESCGCAPDLVLSNVLIDCLSKMGRHNDALYVFLTLSQ 181
TSLIKGF+ M D A +VL+ V+S G APD+VL N++I +++GR +A VF +L +
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 182 RNLEPDSY 205
R L PD Y
Sbjct: 346 RKLVPDQY 353