BLASTX nr result
ID: Sinomenium21_contig00043341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043341
(711 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm... 97 2e-21
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus] 91 5e-16
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)... 90 6e-16
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 89 1e-15
ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata] gi|... 89 2e-15
ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|3... 89 2e-15
gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hord... 88 2e-15
ref|YP_008592640.1| photosystem I assembly protein ycf3 (chlorop... 88 3e-15
gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chl... 88 3e-15
gb|ADD30856.1| putative RF3 protein [Dillenia indica] 88 3e-15
gb|AGU00059.1| hypothetical chloroplast RF34 (chloroplast) [Glyc... 87 4e-15
ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) ... 87 4e-15
ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) ... 87 4e-15
ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) ... 87 4e-15
gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis ... 87 4e-15
ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chlorop... 87 4e-15
ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) ... 87 4e-15
gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argy... 87 4e-15
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 87 4e-15
ref|YP_008081266.1| hypothetical chloroplast RF34 (chloroplast) ... 87 4e-15
>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
gi|223522895|gb|EEF26886.1| conserved hypothetical
protein [Ricinus communis]
Length = 110
Score = 97.4 bits (241), Expect(2) = 2e-21
Identities = 60/115 (52%), Positives = 67/115 (58%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI*FFLFILSVLREGHMI 310
MPRSRI GN IDKTF VA ILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRITGNSIDKTF--VAKILLRIIPTTSGEKEAFTYYRDGEV---------------- 42
Query: 311 RDRKKKYFLLKETHAC*R*SLVGWK*NNSFCRVSSIDAASNASILDSSLKRKVTP 475
+K NNSFCRVS I+AAS+ASI+DSS++RKV P
Sbjct: 43 -----------------------YKENNSFCRVSPINAASDASIVDSSIERKVNP 74
Score = 32.0 bits (71), Expect(2) = 2e-21
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 493 QTNPTLLVPIDSRREEALHLGIN 561
+ NPT LVPI +EEAL LGIN
Sbjct: 71 KVNPTPLVPIGGIKEEALRLGIN 93
>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
Length = 170
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44
>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
carolinense]
Length = 44
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDGAI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAI 44
>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
gi|403226782|gb|AFR25661.1| hypothetical chloroplast
RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGA+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAM 44
>ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata]
gi|346228473|gb|AEO21345.1| hypothetical chloroplast
RF34 [Rhynchoryza subulata] gi|353685054|gb|AER12819.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
sativa Indica Group] gi|353685142|gb|AER12906.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
sativa Indica Group] gi|555945989|gb|AGZ19215.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
rufipogon]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEK AFTYYRDGAI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGAI 44
>ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|346228305|gb|AEO21179.1|
hypothetical chloroplast RF34 [Leersia tisserantii]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEK AFTYYRDGAI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGAI 44
>gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
vulgare] gi|521301030|gb|AGP50832.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum] gi|521301111|gb|AGP50912.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum]
Length = 172
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSR+NGNFIDKTFSI+ANILLRIIPTTSGEK+AFTYYRDGAI
Sbjct: 1 MPRSRVNGNFIDKTFSIIANILLRIIPTTSGEKKAFTYYRDGAI 44
>ref|YP_008592640.1| photosystem I assembly protein ycf3 (chloroplast) [Berberis bealei]
gi|536462681|gb|AGU37046.1| photosystem I assembly
protein ycf3 (chloroplast) [Berberis bealei]
Length = 169
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chloroplast) [Mollugo
verticillata]
Length = 217
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|ADD30856.1| putative RF3 protein [Dillenia indica]
Length = 168
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGML 44
>gb|AGU00059.1| hypothetical chloroplast RF34 (chloroplast) [Glycyrrhiza glabra]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago]
gi|576312302|ref|YP_009000186.1| hypothetical
chloroplast RF34 (chloroplast) [Silene paradoxa]
gi|555944022|gb|AGZ17926.1| hypothetical chloroplast
RF34 (chloroplast) [Agrostemma githago]
gi|555944275|gb|AGZ18176.1| hypothetical chloroplast
RF34 (chloroplast) [Silene paradoxa]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) [Magnolia dealbata]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) [Hypseocharis bilobata]
gi|540067559|gb|AGV02910.1| hypothetical chloroplast
RF34 (chloroplast) [Hypseocharis bilobata]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis var. assamica]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chloroplast) [Lupinus luteus]
gi|485474317|gb|AGK82919.1| photosystem I assembly
protein Ycf3 (chloroplast) [Lupinus luteus]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
gi|458599091|gb|AGG38957.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argyreia nervosa]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
Length = 169
Score = 87.4 bits (215), Expect = 4e-15
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 262
MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_008081266.1| hypothetical chloroplast RF34 (chloroplast) [Catharanthus roseus]
gi|474452077|gb|AGI51145.1| hypothetical chloroplast
RF34 (chloroplast) [Catharanthus roseus]
Length = 168
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 131 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 256
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42