BLASTX nr result
ID: Sinomenium21_contig00043046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043046
(365 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prun... 111 1e-22
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 102 6e-20
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 100 2e-19
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr... 100 2e-19
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 99 8e-19
ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily pr... 96 4e-18
gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus... 93 4e-17
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 89 6e-16
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 85 1e-14
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 82 6e-14
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 82 6e-14
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689... 82 6e-14
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp.... 80 2e-13
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A... 78 1e-12
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A... 78 1e-12
dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group] 64 3e-08
gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japo... 64 3e-08
>ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
gi|462408583|gb|EMJ13917.1| hypothetical protein
PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 111 bits (277), Expect = 1e-22
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EKL G+LDVTTYN LL GLF R IEEA RVFD MR ++++ S++IMI GL V E+R
Sbjct: 480 EKLNGSLDVTTYNVLLSGLFAARRIEEAMRVFDYMRRHNLMSSASFTIMIRGLCGVKELR 539
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AMKIHDEMLK+ LKPD TYK+LIS F
Sbjct: 540 KAMKIHDEMLKMRLKPDAATYKRLISGF 567
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 108 bits (271), Expect = 6e-22
Identities = 52/88 (59%), Positives = 71/88 (80%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
+K+ G+LDV TYN LL GLF E+ IE+A VFDCMR++ +L++ S++IM++GL E+R
Sbjct: 481 KKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELR 540
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AMK HDEMLK+GLKPD+ TYK+LIS F
Sbjct: 541 KAMKFHDEMLKMGLKPDRATYKRLISGF 568
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 102 bits (254), Expect = 6e-20
Identities = 52/88 (59%), Positives = 65/88 (73%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
E+LG LDV TY LL LFK R EEA ++FD MRT +L++GS+SIMI GL +E R
Sbjct: 496 ERLGVALDVETYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGSFSIMIRGLCQEEEFR 555
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AM++HD+MLKLG KPDK YK+LIS F
Sbjct: 556 KAMRLHDDMLKLGFKPDKKAYKRLISGF 583
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 100 bits (250), Expect = 2e-19
Identities = 48/88 (54%), Positives = 65/88 (73%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EKL +LD+T YN LL GL KE +EE+ +VFD M+ K+ N+ S++++I GL E+R
Sbjct: 504 EKLQASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELR 563
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AMK+HDEML +GLKPDK TYK+LI F
Sbjct: 564 KAMKLHDEMLNMGLKPDKPTYKRLILEF 591
>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
gi|557551699|gb|ESR62328.1| hypothetical protein
CICLE_v10018367mg [Citrus clementina]
Length = 578
Score = 100 bits (249), Expect = 2e-19
Identities = 49/89 (55%), Positives = 70/89 (78%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EKL G+LDV TY+ LL GLFK+ +EEA ++FD M+ KV+++ S+ I+++ L + E+R
Sbjct: 490 EKLKGSLDVATYDVLLDGLFKDGRMEEAVQIFDYMKELKVVSSSSFVIVVSRLCHLKELR 549
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRFL 267
+AMKIHDEMLK+G KPD+ TYKQ+IS F+
Sbjct: 550 KAMKIHDEMLKMGHKPDEATYKQVISGFM 578
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/89 (55%), Positives = 69/89 (77%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EKL G+LDV TY+ LL GLFK+ +EEA R+FD M+ KV+++ S+ I+++ L + E+R
Sbjct: 450 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELR 509
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRFL 267
+AMK HDEMLK+G KPD+ TYKQ+IS F+
Sbjct: 510 KAMKNHDEMLKMGHKPDEATYKQVISGFM 538
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 99.4 bits (246), Expect = 5e-19
Identities = 51/88 (57%), Positives = 63/88 (71%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
E+LG LDV TY LL LFK R EEA ++FD MRT +L++ S+SIMI GL E R
Sbjct: 496 ERLGVALDVETYGLLLDSLFKSRRREEALKIFDYMRTHDMLSSESFSIMIRGLCQEQEFR 555
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AM++HD+MLKLG KPDK YK+LIS F
Sbjct: 556 KAMRLHDDMLKLGFKPDKKAYKRLISGF 583
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/88 (57%), Positives = 62/88 (70%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EKL +LDV TYN LL GL K IEE RVFD M+ K++N+ S++I I GL EMR
Sbjct: 475 EKLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMR 534
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AMK+HDEML +GLKPDK YK+LI F
Sbjct: 535 KAMKLHDEMLDMGLKPDKAAYKRLILEF 562
>ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508781360|gb|EOY28616.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 578
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/88 (56%), Positives = 65/88 (73%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
EK+ G LDVTTYN +L L+ ER EEA RV+D M ++++ S++IMI L + EM+
Sbjct: 490 EKVKGCLDVTTYNMILDVLWGERKAEEAVRVYDYMTGLNLVDSASFTIMIRELCHMKEMK 549
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AMKIHDEML +GLKPDK TYK+LIS F
Sbjct: 550 KAMKIHDEMLNMGLKPDKGTYKRLISGF 577
>gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus guttatus]
Length = 426
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMR 180
E+L G+LD+ YN + LF++ EE +VFD M+ K+ + S+S MI GL V E R
Sbjct: 338 EELKGSLDIAAYNKFIAALFRDNRAEETIKVFDYMKACKIFDGESFSHMICGLCRVKEFR 397
Query: 181 RAMKIHDEMLKLGLKPDKDTYKQLISRF 264
+AM+ HDEML+LGLKPD+ TYK+LIS F
Sbjct: 398 KAMRFHDEMLELGLKPDRRTYKRLISGF 425
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLFKER--MIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L + M+EEA +VF+ M+ +N+ S++IMI GL V E
Sbjct: 494 KKMKGSLDVNAYNAVLDRLMMRQRTMVEEAVQVFEYMKEMNTVNSKSFTIMIHGLCRVKE 553
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++AMK HDEMLKLGLKPD TYK+LIS F
Sbjct: 554 MKKAMKSHDEMLKLGLKPDLVTYKRLISGF 583
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLF--KERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L + M+EEA RVF+ M+ K +N+ S++IMI GL V E
Sbjct: 495 KKMKGSLDVNAYNAVLDRLMMRQREMVEEAVRVFEYMKEMKSVNSKSFTIMIQGLCHVKE 554
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++A + HDEMLKLG+KPD TYK++I F
Sbjct: 555 MKKAKQSHDEMLKLGMKPDLATYKRVIYGF 584
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLF--KERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L ++ M+EEA VF+ M+ +N+ S++IMI GL V E
Sbjct: 461 KKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKE 520
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++AM+ HDEML+LGLKPD TYK+LI F
Sbjct: 521 MKKAMRSHDEMLRLGLKPDLVTYKRLILGF 550
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLF--KERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L ++ M+EEA VF+ M+ +N+ S++IMI GL V E
Sbjct: 495 KKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKE 554
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++AM+ HDEML+LGLKPD TYK+LI F
Sbjct: 555 MKKAMRSHDEMLRLGLKPDLVTYKRLILGF 584
>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
putative protein [Arabidopsis thaliana]
Length = 534
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLF--KERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L ++ M+EEA VF+ M+ +N+ S++IMI GL V E
Sbjct: 444 KKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKE 503
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++AM+ HDEML+LGLKPD TYK+LI F
Sbjct: 504 MKKAMRSHDEMLRLGLKPDLVTYKRLILGF 533
>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 EKLGGNLDVTTYNFLLVGLF--KERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDE 174
+K+ G+LDV YN +L L ++ M+EEA VF+ M+ K +N+ S++IMI GL V E
Sbjct: 444 KKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKE 503
Query: 175 MRRAMKIHDEMLKLGLKPDKDTYKQLISRF 264
M++AM+ HDEML+L +KPD +YK+LI F
Sbjct: 504 MKKAMRSHDEMLRLDMKPDLVSYKRLILGF 533
>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
gi|548861770|gb|ERN19141.1| hypothetical protein
AMTR_s00061p00160470 [Amborella trichopoda]
Length = 372
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = +1
Query: 4 KLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMRR 183
KLG L+ +YN LL L+ +EEAS +FD MR K V ++ S+ MI+ +
Sbjct: 285 KLGNVLNAPSYNILLDQLYNGGKLEEASEMFDHMRNKNVTSSASFITMISWFCWEKKFSE 344
Query: 184 AMKIHDEMLKLGLKPDKDTYKQLISRF 264
A K+HDEMLK GLKPD+ TYK+LIS F
Sbjct: 345 ARKMHDEMLKKGLKPDEATYKRLISVF 371
>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
gi|548830797|gb|ERM93720.1| hypothetical protein
AMTR_s00004p00243870 [Amborella trichopoda]
Length = 359
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = +1
Query: 4 KLGGNLDVTTYNFLLVGLFKERMIEEASRVFDCMRTKKVLNTGSYSIMIAGLSCVDEMRR 183
K G L+ +YN LL L+ E +EEAS +FD MR K V ++ S+ MI+ +
Sbjct: 272 KSGNVLNAPSYNILLNRLYNEGKLEEASGMFDYMRNKDVTSSASFMTMISWFCREKKFSE 331
Query: 184 AMKIHDEMLKLGLKPDKDTYKQLISRF 264
A K+HDEMLK GLKPD+ TYK+LIS F
Sbjct: 332 ARKMHDEMLKKGLKPDEATYKRLISGF 358
>dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 TYNFLLVGLFKERMIEEASRVFDCMRTKKVL-NTGSYSIMIAGLSCVDEMRRAMKIHDEM 207
T+ L+ G K++ ++EA+R+FD M V+ N ++++MI G V +R+A +++D+M
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562
Query: 208 LKLGLKPDKDTYKQLIS 258
+++GLKPD TY+ LIS
Sbjct: 563 VEMGLKPDNYTYRSLIS 579
>gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 TYNFLLVGLFKERMIEEASRVFDCMRTKKVL-NTGSYSIMIAGLSCVDEMRRAMKIHDEM 207
T+ L+ G K++ ++EA+R+FD M V+ N ++++MI G V +R+A +++D+M
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 208 LKLGLKPDKDTYKQLIS 258
+++GLKPD TY+ LIS
Sbjct: 540 VEMGLKPDNYTYRSLIS 556