BLASTX nr result
ID: Sinomenium21_contig00043002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00043002
(359 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHM88684.1| hypothetical chloroplast RF34 (chloroplast) [Lage... 75 1e-11
ref|YP_008757440.1| photosystem I assembly protein Ycf3 (chlorop... 75 1e-11
ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sa... 75 1e-11
ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicag... 75 1e-11
gb|ACG30634.1| hypothetical protein [Zea mays] 75 1e-11
gb|ABR13318.1| putative photosystem I assembly protein [Prunus d... 75 1e-11
gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Mimulu... 72 8e-11
ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citr... 71 1e-10
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fra... 71 2e-10
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag... 70 3e-10
ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicag... 69 7e-10
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom... 68 2e-09
ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicag... 67 2e-09
gb|AEZ48777.1| photosystem I assembly protein Ycf3, partial [Lil... 66 6e-09
gb|AHV90325.1| hypothetical chloroplast RF34 (chloroplast) [Seta... 65 1e-08
gb|AHV90324.1| hypothetical chloroplast RF34 (chloroplast) [Seta... 65 1e-08
gb|AGW45892.1| hypothetical chloroplast RF34 [Lens culinaris] 64 2e-08
gb|AGU00059.1| hypothetical chloroplast RF34 (chloroplast) [Glyc... 64 2e-08
gb|AGS43963.1| hypothetical chloroplast RF34 [Vicia faba] 64 2e-08
ref|YP_009026441.1| Ycf3 (chloroplast) [Dendrobium officinale] g... 64 2e-08
>gb|AHM88684.1| hypothetical chloroplast RF34 (chloroplast) [Lagenaria siceraria]
gi|595645281|gb|AHM88743.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645340|gb|AHM88801.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645399|gb|AHM88859.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645457|gb|AHM88916.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645516|gb|AHM88974.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645576|gb|AHM89033.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645636|gb|AHM89092.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645696|gb|AHM89151.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645756|gb|AHM89210.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645816|gb|AHM89269.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645877|gb|AHM89329.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645937|gb|AHM89388.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595645997|gb|AHM89447.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646057|gb|AHM89506.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646118|gb|AHM89566.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646178|gb|AHM89625.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646238|gb|AHM89684.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646298|gb|AHM89743.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646358|gb|AHM89802.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646418|gb|AHM89861.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646478|gb|AHM89920.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646538|gb|AHM89979.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646598|gb|AHM90038.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646658|gb|AHM90097.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646718|gb|AHM90156.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646778|gb|AHM90215.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646838|gb|AHM90274.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646898|gb|AHM90333.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595646958|gb|AHM90392.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647018|gb|AHM90451.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647078|gb|AHM90510.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647138|gb|AHM90569.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647198|gb|AHM90628.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647258|gb|AHM90687.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647318|gb|AHM90746.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647378|gb|AHM90805.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647438|gb|AHM90864.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647498|gb|AHM90923.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647558|gb|AHM90982.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647618|gb|AHM91041.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647677|gb|AHM91099.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647738|gb|AHM91159.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647797|gb|AHM91217.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
gi|595647855|gb|AHM91274.1| hypothetical chloroplast
RF34 (chloroplast) [Lagenaria siceraria]
Length = 125
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 91 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 125
>ref|YP_008757440.1| photosystem I assembly protein Ycf3 (chloroplast) [Oryza rufipogon]
gi|552954478|gb|AGY48946.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza rufipogon]
Length = 82
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
gi|297840977|ref|XP_002888370.1| photosystem I assembly
protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
gi|78675169|dbj|BAE47595.1| photosystem I assembly
protein ycf3 [Lactuca sativa]
gi|255631288|gb|ACU16011.1| unknown [Glycine max]
gi|297334211|gb|EFH64629.1| photosystem I assembly
protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
gi|225200|prf||1211235AE ORF 82
Length = 82
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
gi|355507096|gb|AES88238.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
Length = 135
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 101 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 135
>gb|ACG30634.1| hypothetical protein [Zea mays]
Length = 82
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>gb|ABR13318.1| putative photosystem I assembly protein [Prunus dulcis]
Length = 39
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLSPL
Sbjct: 5 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 39
>gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Mimulus guttatus]
Length = 82
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLS L
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSSL 82
>ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citrus clementina]
gi|567885976|ref|XP_006435531.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|567906098|ref|XP_006445528.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
gi|557533397|gb|ESR44565.1| hypothetical protein
CICLE_v10030468mg [Citrus clementina]
gi|557537685|gb|ESR48771.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|557547808|gb|ESR58768.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
Length = 82
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLSPL 201
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLS L
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLSLL 82
>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fraxinus chinensis]
Length = 80
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLS 207
KAL+YYFRALERNPFLPQAFNNMAVICHYVRLS
Sbjct: 48 KALEYYFRALERNPFLPQAFNNMAVICHYVRLS 80
>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355488619|gb|AES69822.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 160
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLS 207
KAL+YYFRALERNPFLPQAFNNMAVICHYVR+S
Sbjct: 60 KALEYYFRALERNPFLPQAFNNMAVICHYVRMS 92
>ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355506675|gb|AES87817.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 201
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVRLS 207
KAL+YYFRALERNPFLPQAFNNMA+ICHYVR+S
Sbjct: 101 KALEYYFRALERNPFLPQAFNNMALICHYVRMS 133
>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
gi|340549408|gb|AEK53230.1| hypothetical chloroplast
RF34 (chloroplast) [Boea hygrometrica]
Length = 171
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVR 213
KAL+YYFRALERNPFLPQAFNNMAVICHYVR
Sbjct: 92 KALEYYFRALERNPFLPQAFNNMAVICHYVR 122
>ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula]
Length = 163
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVR 213
KAL+YYFRALERNPFLPQAFNNMAVICHY+R
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHYIR 120
>gb|AEZ48777.1| photosystem I assembly protein Ycf3, partial [Lilium superbum]
Length = 168
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHY 219
KALKYYFRALERNPFLPQAFNNMAVICHY
Sbjct: 90 KALKYYFRALERNPFLPQAFNNMAVICHY 118
>gb|AHV90325.1| hypothetical chloroplast RF34 (chloroplast) [Setaria italica]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVR 213
KAL+YYFRALERNPFLPQAFNNMAVICHY R
Sbjct: 92 KALEYYFRALERNPFLPQAFNNMAVICHYDR 122
>gb|AHV90324.1| hypothetical chloroplast RF34 (chloroplast) [Setaria italica]
Length = 171
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHYVR 213
KAL+YYFRALERNPFLPQAFNNMAVICHY R
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHYDR 120
>gb|AGW45892.1| hypothetical chloroplast RF34 [Lens culinaris]
Length = 168
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHY 219
KAL+YYFRALERNPFLPQAFNNMAVICHY
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHY 118
>gb|AGU00059.1| hypothetical chloroplast RF34 (chloroplast) [Glycyrrhiza glabra]
Length = 168
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHY 219
KAL+YYFRALERNPFLPQAFNNMAVICHY
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHY 118
>gb|AGS43963.1| hypothetical chloroplast RF34 [Vicia faba]
Length = 168
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHY 219
KAL+YYFRALERNPFLPQAFNNMAVICHY
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHY 118
>ref|YP_009026441.1| Ycf3 (chloroplast) [Dendrobium officinale]
gi|507474326|gb|AGM48202.1| Ycf3 (chloroplast)
[Dendrobium officinale]
Length = 168
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 305 KALKYYFRALERNPFLPQAFNNMAVICHY 219
KAL+YYFRALERNPFLPQAFNNMAVICHY
Sbjct: 90 KALEYYFRALERNPFLPQAFNNMAVICHY 118