BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00042857
         (303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ37108.1| photosystem II protein D2 (chloroplast) [Ginkgo b...    60   4e-07
gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminth...    59   7e-07
gb|AGQ03783.1| photosystem II protein D2 (chloroplast) [Botrychi...    59   7e-07
gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeyla...    59   7e-07
ref|NP_683825.1| photosystem II protein D2 [Chaetosphaeridium gl...    59   9e-07
ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirab...    59   9e-07
ref|YP_009024788.1| photosystem II protein D2 (chloroplast) [Tri...    58   1e-06
ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum] gi|7...    58   1e-06
gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata]        58   1e-06
gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283...    58   2e-06
dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia...    58   2e-06
ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensi...    58   2e-06
gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) ...    58   2e-06
gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata]           58   2e-06
gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana...    58   2e-06
gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta]              58   2e-06
gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea]            58   2e-06
ref|YP_006666462.1| photosystem II protein D2 (chloroplast) [Tre...    57   2e-06
ref|YP_636221.1| D2 reaction center protein of photosystem II [P...    57   3e-06
ref|YP_001023698.1| photosystem II protein D2 [Angiopteris evect...    57   3e-06

>gb|AEQ37108.1| photosystem II protein D2 (chloroplast) [Ginkgo biloba]
          Length = 335

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLR--------KLRTTE*ATFSLLCLRFD- 228
           EAQ DFTRW  LG LWTFVA HG FGLI FMLR        +LR      FS     FD 
Sbjct: 79  EAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIADFDS 138

Query: 229 --LLYPFLGGIWIF 264
             L+YP     W F
Sbjct: 139 VFLIYPLGQSGWFF 152


>gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminthostachys
           zeylanica]
          Length = 353

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG+FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGSFGLIGFMLRQ 130


>gb|AGQ03783.1| photosystem II protein D2 (chloroplast) [Botrychium strictum]
          Length = 353

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG+FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGSFGLIGFMLRQ 130


>gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeylanica]
          Length = 326

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG+FGLI FMLR+
Sbjct: 70  EAQGDFTRWCQLGGLWTFVAFHGSFGLIGFMLRQ 103


>ref|NP_683825.1| photosystem II protein D2 [Chaetosphaeridium globosum]
           gi|75272582|sp|Q8M9W4.1|PSBD_CHAGL RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|22416941|gb|AAM96541.1| D2 reaction center protein of
           photosystem II [Chaetosphaeridium globosum]
          Length = 353

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGAFGLIGFMLRQ 130


>ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirabilis]
           gi|221222715|sp|B2Y1U5.1|PSBD_WELMI RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|163311617|gb|ABY26775.1| photosystem II protein D2
           [Welwitschia mirabilis] gi|220983405|dbj|BAH11174.1|
           photosystem II protein D2 (chloroplast) [Welwitschia
           mirabilis]
          Length = 353

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGAFGLIGFMLRQ 130


>ref|YP_009024788.1| photosystem II protein D2 (chloroplast) [Trigonobalanus
           doichangensis] gi|597710359|gb|AHN16120.1| photosystem
           II protein D2 (chloroplast) [Trigonobalanus
           doichangensis]
          Length = 353

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVA HGTFGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVALHGTFGLIGFMLRQ 130


>ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum]
           gi|75248913|sp|Q8WI19.1|PSBD_PSINU RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|18389461|dbj|BAB84213.1| PSII D2-protein [Psilotum
           nudum] gi|441018014|gb|AGC26790.1| photosystem II D2
           protein (chloroplast) [Psilotum nudum]
          Length = 353

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTF+AFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFIAFHGAFGLIGFMLRQ 130


>gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata]
          Length = 322

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTF+AFHG FGLI FMLR+
Sbjct: 66  EAQGDFTRWCQLGGLWTFIAFHGAFGLIGFMLRQ 99


>gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283332|gb|AFM54147.1|
           PsbD (chloroplast) [Zamia furfuracea]
          Length = 353

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 130


>dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia serrulata]
          Length = 353

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 130


>ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensis]
           gi|452848984|ref|YP_007474663.1| photosystem II protein
           D2 (chloroplast) [Cycas revoluta]
           gi|221222684|sp|A6H5G6.1|PSBD_CYCTA RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|149941508|dbj|BAF64932.1| photosystem II protein D2
           (chloroplast) [Cycas taitungensis]
           gi|156598075|gb|ABU85303.1| photosystem II protein D2
           [Cycas micronesica] gi|372863139|gb|AEX99212.1|
           photosystem II protein D2 (chloroplast) [Cycas revoluta]
          Length = 353

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 97  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 130


>gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) [Microcycas
           calocoma]
          Length = 312

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 56  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 89


>gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata]
          Length = 326

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 70  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 103


>gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana]
           gi|33317762|gb|AAQ04791.1| photosystem II D2 protein
           [Encephalartos barteri] gi|33317771|gb|AAQ04797.1|
           photosystem II D2 protein [Stangeria eriopus]
           gi|56683010|gb|AAW21841.1| photosystem II D2 protein,
           partial (chloroplast) [Lepidozamia hopei]
           gi|56683013|gb|AAW21843.1| photosystem II D2 protein,
           partial (chloroplast) [Macrozamia moorei]
          Length = 326

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 70  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 103


>gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta]
          Length = 326

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 70  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 103


>gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea]
          Length = 326

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLRK 177
           EAQ DFTRW  LG LWTFVAFHG FGLI FMLR+
Sbjct: 70  EAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQ 103


>ref|YP_006666462.1| photosystem II protein D2 (chloroplast) [Trebouxiophyceae sp.
           MX-AZ01] gi|402746122|gb|AFQ93817.1| photosystem II
           protein D2 (chloroplast) [Trebouxiophyceae sp. MX-AZ01]
          Length = 352

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/74 (48%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLR--------KLRTTE*ATFS---LLCLR 222
           EAQ DFTRW  LG LWTFVA HG FGLI FMLR        KLR      FS    + + 
Sbjct: 96  EAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVKLRPYNAIAFSAPIAVFVS 155

Query: 223 FDLLYPFLGGIWIF 264
             L+YP     W F
Sbjct: 156 VFLIYPLGQSGWFF 169


>ref|YP_636221.1| D2 reaction center protein of photosystem II [Pseudendoclonium
           akinetum] gi|122217868|sp|Q3ZJ46.1|PSBD_PSEAK RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|56159677|gb|AAV80701.1| D2 reaction center protein of
           photosystem II [Pseudendoclonium akinetum]
          Length = 352

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLR--------KLRTTE*ATFS---LLCLR 222
           EAQ DFTRW  LG LWTFVA HG+FGLI FMLR        K+R      FS    + + 
Sbjct: 96  EAQSDFTRWCQLGGLWTFVALHGSFGLIGFMLRQFEIARAVKIRPYNAIAFSGPIAVFVS 155

Query: 223 FDLLYPFLGGIWIF 264
             L+YP     W F
Sbjct: 156 VFLIYPLGQAGWFF 169


>ref|YP_001023698.1| photosystem II protein D2 [Angiopteris evecta]
           gi|221222620|sp|A2T330.1|PSBD_ANGEV RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|110628301|gb|ABG79597.1| photosystem II protein D2
           [Angiopteris evecta]
          Length = 353

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
 Frame = +1

Query: 76  EAQ*DFTRWP*LGSLWTFVAFHGTFGLIDFMLR--------KLRTTE*ATFS---LLCLR 222
           EAQ DFTRW  LG LWTFVA HG+FGLI FMLR        +LR      FS    + + 
Sbjct: 97  EAQGDFTRWCQLGGLWTFVALHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPISVFVS 156

Query: 223 FDLLYPFLGGIWIF 264
             L+YP     W F
Sbjct: 157 VSLIYPLGQAGWFF 170