BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00042445
         (657 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007016826.1| Pentatricopeptide repeat-containing protein,...   206   5e-51
ref|XP_007206240.1| hypothetical protein PRUPE_ppa015514mg, part...   203   4e-50
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,...   193   3e-47
ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containi...   192   6e-47
ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containi...   186   6e-45
ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citr...   186   6e-45
ref|XP_002534209.1| pentatricopeptide repeat-containing protein,...   185   9e-45
ref|XP_007027377.1| Pentatricopeptide repeat superfamily protein...   180   4e-43
ref|XP_006359568.1| PREDICTED: pentatricopeptide repeat-containi...   178   2e-42
ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi...   177   3e-42
emb|CBI32762.3| unnamed protein product [Vitis vinifera]              177   3e-42
ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containi...   172   6e-41
ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutr...   170   3e-40
ref|NP_180822.1| pentatricopeptide repeat-containing protein [Ar...   170   3e-40
ref|XP_002879404.1| pentatricopeptide repeat-containing protein ...   169   9e-40
ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago t...   167   2e-39
ref|XP_002879120.1| pentatricopeptide repeat-containing protein ...   167   3e-39
ref|XP_006296453.1| hypothetical protein CARUB_v10025637mg [Caps...   166   6e-39
ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Caps...   163   4e-38
ref|NP_180372.1| pentatricopeptide repeat-containing protein [Ar...   162   9e-38

>ref|XP_007016826.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508787189|gb|EOY34445.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 561

 Score =  206 bits (524), Expect = 5e-51
 Identities = 97/200 (48%), Positives = 142/200 (71%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P LK   C  FFN +  N+   S+K DLQA++T+ CRL K R F+ A+ +L S ++   +
Sbjct: 157 PDLKASKCFRFFNLVIKNQSLVSFKPDLQAHLTLTCRLLKARLFSDAEAMLKSVSVDESL 216

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           + P  V  S V+NCC +S+V TK ++++ +VYSDN KF E L+TF+YMK+NG+ IDER+C
Sbjct: 217 RYPFLVIASAVENCCFESKVITKFYNLMLKVYSDNGKFGEVLKTFDYMKNNGIKIDERTC 276

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
            V+L+ALK +D+   AL FFY M+E+G+ +SVYS+T VV+ LC+ G  KK R++++EM  
Sbjct: 277 TVHLIALKGADELGLALHFFYLMVETGIEISVYSLTAVVDGLCRNGDVKKGREIVEEMAD 336

Query: 594 KGIEPNIITYNTLIDAFIKR 653
           +GI+ N+ITYN +IDA  KR
Sbjct: 337 RGIKANVITYNIMIDACAKR 356


>ref|XP_007206240.1| hypothetical protein PRUPE_ppa015514mg, partial [Prunus persica]
           gi|462401882|gb|EMJ07439.1| hypothetical protein
           PRUPE_ppa015514mg, partial [Prunus persica]
          Length = 417

 Score =  203 bits (516), Expect = 4e-50
 Identities = 93/200 (46%), Positives = 140/200 (70%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P+ K   CL FFNFL  N+ F S+K DL A++T++CRL K R+FT A++I    ++    
Sbjct: 30  PKFKCSRCLLFFNFLLKNQSFISFKIDLHAHLTLICRLLKARKFTEAEEIFKCISVDENS 89

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           + P +V  S  + CC + RV  K+F+++ +VYSD+  F++  ET ++MK NG+ IDER+C
Sbjct: 90  RYPFSVIASAAEICCLEPRVKAKLFNLMIKVYSDSENFKQVFETLDFMKSNGIQIDERTC 149

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
            V+LLAL R D+  + L FFYR+LESG  +SVYS+T++V+ LC+ G  K++R+L++EM  
Sbjct: 150 TVHLLALNRRDEVQKGLDFFYRLLESGTKVSVYSLTVMVDGLCRSGEIKRSRELVEEMVS 209

Query: 594 KGIEPNIITYNTLIDAFIKR 653
            G +PNIIT+NT++DA  KR
Sbjct: 210 IGTKPNIITFNTIVDACAKR 229


>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 613

 Score =  193 bits (491), Expect = 3e-47
 Identities = 96/199 (48%), Positives = 140/199 (70%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P L TR+CL+FF  L  N+    +K DL+A+V ++ RLFK R+F + K +L   A+   +
Sbjct: 64  PNLPTRSCLNFFKCLQKNQSLICHKPDLRAHVILISRLFKARKFVVMKNVLTCYAMDKNL 123

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           +  ++  VSL+ N   + +   K+ DMLFRVY DN+ F+E  + F+YM  NGL ID+RSC
Sbjct: 124 RCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSC 183

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
           IV LLALKRSD+   +LGFF +M+E  V ++VYSMTIV++ LCK+G  ++A+ L+ EM  
Sbjct: 184 IVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTG 243

Query: 594 KGIEPNIITYNTLIDAFIK 650
           KGI+PN++TYNTL++A+IK
Sbjct: 244 KGIKPNVVTYNTLVNAYIK 262



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/118 (30%), Positives = 64/118 (54%)
 Frame = +3

Query: 303 VFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRM 482
           +F+ L   Y       EAL   + M+  G   D  +       L + ++ ++A  + + M
Sbjct: 392 IFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTM 451

Query: 483 LESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
           +E GV  +  S TI++++ CK G   +A ++  +M+ KG +PN++TYNTLID + K+G
Sbjct: 452 VEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKG 509


>ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32630-like
            [Solanum tuberosum]
          Length = 1090

 Score =  192 bits (489), Expect = 6e-47
 Identities = 96/199 (48%), Positives = 139/199 (69%)
 Frame = +3

Query: 54   PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
            P + T++CLSFF FL  N+ F   + +L++++ +  RLFK R+F  AK IL++ A    +
Sbjct: 544  PSVPTQSCLSFFKFLQKNQSFE--RPNLESHIALFLRLFKARKFAEAKSILHTVASDDSL 601

Query: 234  KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
            ++P+    S +     D +V  K+FDMLFRVY D+ +F+EALE FEYMK+ G  ID+RSC
Sbjct: 602  RKPILEIASFLGENHVDHKVMGKMFDMLFRVYVDSMRFKEALEVFEYMKNGGFEIDDRSC 661

Query: 414  IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
            +VYLLA+KR  + D  + FF  M+ES V ++VYSMT+V++ LCK G   KAR+L+DEM  
Sbjct: 662  MVYLLAMKRRKQYDSLVEFFEMMVESDVRITVYSMTMVIDGLCKVGEVSKARKLMDEMVS 721

Query: 594  KGIEPNIITYNTLIDAFIK 650
            KG++PN+ TYNTL+DA +K
Sbjct: 722  KGVKPNVYTYNTLLDACMK 740



 Score =  104 bits (260), Expect = 2e-20
 Identities = 50/103 (48%), Positives = 73/103 (70%)
 Frame = +3

Query: 342 KFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMT 521
           +F EAL+ F+YMK     ID+R+C+VYLLA+KR  + D    FF++M+E  V ++VYSMT
Sbjct: 2   RFNEALQVFDYMKKGCFRIDDRACMVYLLAMKRQRQYDSLFEFFHKMVEFNVKITVYSMT 61

Query: 522 IVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIK 650
           +VV+ LCK G   +AR+L+DEM  K ++P+  TYN L+  +IK
Sbjct: 62  VVVDGLCKMGEVCEARKLMDEMASKRVKPSDYTYNILLQEYIK 104



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 36/137 (26%), Positives = 66/137 (48%)
 Frame = +3

Query: 246  AVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYL 425
            A  V L +   K   +   +F+ +   Y       EA    + M+  G   D     +  
Sbjct: 851  AAEVLLNEMQSKGIDIGPVIFNTMMDGYCKQGNIDEAWRLQKIMEGKGYESDVYVYNIIA 910

Query: 426  LALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIE 605
              L + D+ ++A  + + M++ GV  +  + T ++++  K G   +A++ + EM  KG++
Sbjct: 911  TGLCKLDRCEEAKTWLFSMVDRGVAPNEVAHTTLISIYSKEGNFVEAKRTLREMEAKGVK 970

Query: 606  PNIITYNTLIDAFIKRG 656
            PN  TYNTLID + K+G
Sbjct: 971  PNTATYNTLIDGYCKKG 987



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/126 (24%), Positives = 60/126 (47%)
 Frame = +3

Query: 279 KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQ 458
           K   +   +F+ +   Y       EAL     M+      +  +  + ++ +++ +  D+
Sbjct: 226 KGISIDRVIFNTMMDGYCKQGNVDEALRLQTIMEGERHQPNANAYNIIVMGMRKLELYDE 285

Query: 459 ALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLID 638
           A      M++ GV     S T ++++ CK+G   +A++ + EM  K I+PN  TY TL+D
Sbjct: 286 AKRLLLSMVDRGVAPDTISYTTLIDIYCKQGNFVEAKRALIEMETKEIKPNTTTYTTLVD 345

Query: 639 AFIKRG 656
            + K G
Sbjct: 346 GYCKLG 351


>ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Citrus sinensis]
          Length = 630

 Score =  186 bits (472), Expect = 6e-45
 Identities = 89/198 (44%), Positives = 135/198 (68%)
 Frame = +3

Query: 60  LKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEIKR 239
           L   ACL FFNFL  N    S++ DLQA+VT++CRL + ++F   K++ N       ++ 
Sbjct: 66  LPPHACLHFFNFLRQNPSLYSHRPDLQAHVTLICRLHEAQKFAEMKKVFNYIVTDANLRC 125

Query: 240 PLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIV 419
            +   +SL+++  +  +   K  D+LFRVY+DN  F++AL  F+YM+ +GL IDERSCI 
Sbjct: 126 SIVNLISLIESGNQQPKFVEKFCDLLFRVYADNRLFEDALGVFDYMERSGLKIDERSCIA 185

Query: 420 YLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKG 599
           +LLALKR D  +    FF +M+++ V ++VYS++I+++ LCKRG  + AR L+DEM VKG
Sbjct: 186 FLLALKRCDHIEMCFKFFRKMVDANVEITVYSISIMIDGLCKRGDVEMARDLMDEMVVKG 245

Query: 600 IEPNIITYNTLIDAFIKR 653
           I+PN+ TYNTL++ F+KR
Sbjct: 246 IKPNLYTYNTLLNGFVKR 263



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/122 (27%), Positives = 64/122 (52%)
 Frame = +3

Query: 291 VSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGF 470
           V+  +F+ L   Y       EAL+    M+  G      +       L +  + ++A  +
Sbjct: 388 VNEVIFNTLMNGYCKKGMIDEALKVMAIMEKKGFEAGPFAYNTIASGLCKVKRYNEAKKW 447

Query: 471 FYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIK 650
            + M+E G+ L+  + + ++ + CK G  ++A+ L ++M++KG++PN  TYNTLI  + K
Sbjct: 448 LFTMMERGLALNTVNFSTLIGICCKEGNLEEAKWLFEDMKMKGVKPNSFTYNTLIHGYSK 507

Query: 651 RG 656
           +G
Sbjct: 508 KG 509


>ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citrus clementina]
           gi|557530785|gb|ESR41968.1| hypothetical protein
           CICLE_v10011284mg [Citrus clementina]
          Length = 630

 Score =  186 bits (472), Expect = 6e-45
 Identities = 89/198 (44%), Positives = 135/198 (68%)
 Frame = +3

Query: 60  LKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEIKR 239
           L   ACL FFNFL  N    S++ DLQA+VT++CRL + ++F   K++ N       ++ 
Sbjct: 66  LPPHACLHFFNFLRQNPSLYSHRPDLQAHVTLICRLHEAQKFAEMKKVFNYIVTDANLRC 125

Query: 240 PLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIV 419
            +   +SL+++  +  +   K  D+LFRVY+DN  F++AL  F+YM+ +GL IDERSCI 
Sbjct: 126 SIVNLISLIESGNQQPKFVEKFCDLLFRVYADNRLFEDALGVFDYMERSGLKIDERSCIA 185

Query: 420 YLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKG 599
           +LLALKR D  +    FF +M+++ V ++VYS++I+++ LCKRG  + AR L+DEM VKG
Sbjct: 186 FLLALKRCDHIEMCFKFFRKMVDANVEITVYSISIMIDGLCKRGDVEMARDLMDEMVVKG 245

Query: 600 IEPNIITYNTLIDAFIKR 653
           I+PN+ TYNTL++ F+KR
Sbjct: 246 IKPNLYTYNTLLNGFVKR 263



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 33/122 (27%), Positives = 65/122 (53%)
 Frame = +3

Query: 291 VSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGF 470
           V+  +F+ L   Y       EAL+    M+  G      +       L +  + ++A  +
Sbjct: 388 VNEVIFNTLMNGYCKKGMIDEALKVMAIMEKKGFEAGPFAYNTIASGLCKVKRYNEAKKW 447

Query: 471 FYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIK 650
            + M+E G+ L+  + + ++++ CK G  ++A+ L ++M++KG++PN  TYNTLI  + K
Sbjct: 448 LFTMMERGLALNTVNFSTLIDICCKEGNLEEAKWLFEDMKMKGVKPNSFTYNTLIHGYSK 507

Query: 651 RG 656
           +G
Sbjct: 508 KG 509


>ref|XP_002534209.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525704|gb|EEF28173.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  185 bits (470), Expect = 9e-45
 Identities = 86/194 (44%), Positives = 140/194 (72%), Gaps = 1/194 (0%)
 Frame = +3

Query: 75  CLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEIKRPLAVT 254
           CL FFNF+  N+   S++ DLQAY+T++ RL + R+F+ A+ +L S +I+   + P  + 
Sbjct: 63  CLCFFNFIVKNQSLISFEPDLQAYLTLISRLLEARKFSDAENLLKSVSIEDYHRYPFPLL 122

Query: 255 VSLVKNCC-KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLA 431
            S +++CC  + +V  K+F+++ +VYSDN KF + +ETF++MK+NG+ IDER+C ++LLA
Sbjct: 123 ASTIEHCCCLEPKVIAKLFNLMLKVYSDNKKFGQVIETFDHMKNNGIEIDERTCTMHLLA 182

Query: 432 LKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPN 611
           LKR ++   +L FF  M++SGV +SVYS+TIVV++LC+ G  K+ R+L+ +M   G +PN
Sbjct: 183 LKRKNQIRSSLEFFNLMIKSGVEVSVYSLTIVVDVLCETGEIKRCRELVQKMVTSGTKPN 242

Query: 612 IITYNTLIDAFIKR 653
           I+TYN +I+A  +R
Sbjct: 243 IVTYNVMINACARR 256


>ref|XP_007027377.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508715982|gb|EOY07879.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 743

 Score =  180 bits (456), Expect = 4e-43
 Identities = 91/199 (45%), Positives = 127/199 (63%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P L  ++C  FFNFL  N   +S K  L+ ++ I+ RL+K  +F   K++L        +
Sbjct: 64  PNLPLQSCTLFFNFLKTNLSLTSQKPSLKTHIAIILRLYKAGKFKEIKEVLKFIIFDDNL 123

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           + P+   +SLV   C DS    K  D+ FRV  DN  F+EA   F YM+  G  IDERSC
Sbjct: 124 RYPVEEMISLVGFECNDSNFLEKFCDLYFRVCVDNKMFEEANGVFGYMEKMGFKIDERSC 183

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
           I+YL+ALK+  K D  LG F RM+ESGV +SVYSMTIV++ LC RG  +K R+L++EM  
Sbjct: 184 ILYLIALKKCGKGDSLLGVFRRMVESGVEVSVYSMTIVIDGLCNRGEVEKGRELMNEMVN 243

Query: 594 KGIEPNIITYNTLIDAFIK 650
           KG++ N+ITYNT+++A+IK
Sbjct: 244 KGVKANVITYNTILNAYIK 262



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 35/122 (28%), Positives = 62/122 (50%)
 Frame = +3

Query: 291 VSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGF 470
           V+  VF+ L   Y       +AL     M+  GL  D  +       + +  + ++A  +
Sbjct: 388 VNQVVFNTLLHGYCRKGMMDDALSRLAAMEKKGLQPDVFTYNTIASGMSKLKRHEEAKRW 447

Query: 471 FYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIK 650
            + M+E GV  +V + T ++++ CK G   +A++L  +M  +G  P+ ITYN LID + K
Sbjct: 448 LFMMVEKGVTPNVVNFTTLIDIHCKEGNFVEAKRLFQQMERRGERPDTITYNALIDGYTK 507

Query: 651 RG 656
           +G
Sbjct: 508 KG 509


>ref|XP_006359568.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g28050-like [Solanum tuberosum]
          Length = 522

 Score =  178 bits (451), Expect = 2e-42
 Identities = 91/200 (45%), Positives = 134/200 (67%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P + T  CL FFNFL  N+ F ++K  ++ ++T+VCRL K+  F  A+ +L         
Sbjct: 64  PHINTPKCLDFFNFLMLNQSFITFKIGVETHLTLVCRLVKEGYFEDAETLLVLVPNIETF 123

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           + P AV  S  +N    S+ ++K+F++L +  SDN KF EALE F YMK N + I+ER+C
Sbjct: 124 RCPFAVIASFFENHNVPSKFASKIFNLLLKALSDNGKFNEALEIFMYMKLNAIEINERTC 183

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
            V+L+ L + D+   AL FFY+M+ESG+ +SV+S+T+VV+ LCK G  KKAR+L++EM  
Sbjct: 184 TVHLINLLKCDQIALALVFFYQMVESGIQVSVFSLTVVVDGLCKSGEIKKARELVEEMLS 243

Query: 594 KGIEPNIITYNTLIDAFIKR 653
           KG++PNIIT NTL+DA  +R
Sbjct: 244 KGVKPNIITCNTLVDACARR 263


>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  177 bits (448), Expect = 3e-42
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
 Frame = +3

Query: 60  LKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRR---------FTMAKQILNS 212
           L   +CL FF+F+  N     YK DL+AY+T++ +L++ R+         F   + + N 
Sbjct: 66  LTAESCLDFFHFIRKNY----YKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNC 121

Query: 213 AAIQGEIKRPLAVTVSLVKNCCKDSRVST-----KVFDMLFRVYSDNNKFQEALETFEYM 377
           AA+   ++ P+ V  SLV + C +S+ +      K FD+LFRVY+DN  F EALE FE+M
Sbjct: 122 AAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHM 181

Query: 378 KDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGAT 557
           +  G  IDERSC+VYLLAL+R  + D  L FF RM+   V ++VYS+TIV++ LCKRG  
Sbjct: 182 EKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDV 241

Query: 558 KKARQLIDEMRVKGIEPNIITYNTLIDAFIKR 653
           +  R+L+DE+  KG++ N++TYN  I+ + KR
Sbjct: 242 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 273



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 303 VFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRM 482
           +F+ L   Y ++    EAL     M+  GL  D  +       L + ++ D+A G  + M
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 461

Query: 483 LESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
           +E GV  +  S T ++++ CK G   +A+++  EM  KG  PNIITYN LID + KRG
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
 Frame = +3

Query: 192 AKQILNSAAIQGEIKRPLAVTVSLVKNCCKDSRVSTKV--FDMLFRVYSDNNKFQEALET 365
           A  +  +A I+G  KR     V+ +    +   V+  V  + +L   +S+  K +EA   
Sbjct: 258 ANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRL 317

Query: 366 FEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCK 545
           FE M++ G+  D       +    RS    +AL  F  M + G+  S ++   +++ +CK
Sbjct: 318 FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377

Query: 546 RGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
            G  + A+ L++EM+ KGI+ N + +NTLID + + G
Sbjct: 378 AGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 414


>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  177 bits (448), Expect = 3e-42
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
 Frame = +3

Query: 60  LKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRR---------FTMAKQILNS 212
           L   +CL FF+F+  N     YK DL+AY+T++ +L++ R+         F   + + N 
Sbjct: 70  LTAESCLDFFHFIRKNY----YKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNC 125

Query: 213 AAIQGEIKRPLAVTVSLVKNCCKDSRVST-----KVFDMLFRVYSDNNKFQEALETFEYM 377
           AA+   ++ P+ V  SLV + C +S+ +      K FD+LFRVY+DN  F EALE FE+M
Sbjct: 126 AAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHM 185

Query: 378 KDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGAT 557
           +  G  IDERSC+VYLLAL+R  + D  L FF RM+   V ++VYS+TIV++ LCKRG  
Sbjct: 186 EKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDV 245

Query: 558 KKARQLIDEMRVKGIEPNIITYNTLIDAFIKR 653
           +  R+L+DE+  KG++ N++TYN  I+ + KR
Sbjct: 246 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 277



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 303 VFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRM 482
           +F+ L   Y ++    EAL     M+  GL  D  +       L + ++ D+A G  + M
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 465

Query: 483 LESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
           +E GV  +  S T ++++ CK G   +A+++  EM  KG  PNIITYN LID + KRG
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
 Frame = +3

Query: 192 AKQILNSAAIQGEIKRPLAVTVSLVKNCCKDSRVSTKV--FDMLFRVYSDNNKFQEALET 365
           A  +  +A I+G  KR     V+ +    +   V+  V  + +L   +S+  K +EA   
Sbjct: 262 ANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRL 321

Query: 366 FEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCK 545
           FE M++ G+  D       +    RS    +AL  F  M + G+  S ++   +++ +CK
Sbjct: 322 FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381

Query: 546 RGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
            G  + A+ L++EM+ KGI+ N + +NTLID + + G
Sbjct: 382 AGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 418


>ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Fragaria vesca subsp. vesca]
          Length = 602

 Score =  172 bits (437), Expect = 6e-41
 Identities = 88/200 (44%), Positives = 132/200 (66%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P L  ++CL+FFNFL  N      + +LQA+VT+ CRL +  RF   K ++N+      +
Sbjct: 46  PILPPQSCLTFFNFLRRNPSLIPLRPNLQAHVTLFCRLHQANRFAQMKNVVNTIVHNDRL 105

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           +  ++  VSL++N   +     K+FDMLFRVY +N  F+EA   F+Y+  NGL I+ERSC
Sbjct: 106 QCQVSHIVSLIENGSYERDSVKKLFDMLFRVYVNNEMFEEAFGVFDYVYKNGLEIEERSC 165

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRV 593
              LLALK+ ++ D+ L  F RM E G+ ++VYSMT+V+N LCKRG  ++A++L+ EMR 
Sbjct: 166 FAGLLALKKCNEVDKCLCLFDRMREKGL-VTVYSMTLVINELCKRGEMERAKRLMGEMRG 224

Query: 594 KGIEPNIITYNTLIDAFIKR 653
           +G+E N+ TYNT+  A+I+R
Sbjct: 225 RGVEANVYTYNTIAKAYIER 244



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
 Frame = +3

Query: 126 KHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEIKRPLAVTVSLVKNCCKDS------ 287
           K D+  Y  I   LFK  R   AK+ L + A +G     +  T +L+   CK+       
Sbjct: 403 KADVYTYCNIARGLFKLNRNEEAKRSLLTMAERGVAPNSVCFT-TLIDIYCKEGDFAEAK 461

Query: 288 -----------RVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLAL 434
                      R +   ++ L   Y+   K +EA E  E M+  GL+ D  +   ++   
Sbjct: 462 RVFQEMERKGERHNNVTYNALIDGYTKKGKMKEAHEIKEEMEGKGLMADSYTYSSFIHGE 521

Query: 435 KRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNI 614
             +   D AL  F  M + G+  +V + TI+++ L K G  ++A +L D+M+  GI P+ 
Sbjct: 522 CVAGNMDAALSLFDEMSQKGLTRNVVTYTIIISGLSKVGRKEEAFKLYDDMKKLGIIPDD 581

Query: 615 ITYNTLI 635
             Y++L+
Sbjct: 582 RVYHSLV 588


>ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutrema salsugineum]
           gi|557111562|gb|ESQ51846.1| hypothetical protein
           EUTSA_v10017786mg [Eutrema salsugineum]
          Length = 626

 Score =  170 bits (431), Expect = 3e-40
 Identities = 94/204 (46%), Positives = 132/204 (64%), Gaps = 4/204 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSS-YKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGE 230
           P L T++C+ FF FL   R F S  + DL A VT+  RL+ DRRF   K +LNS A  G 
Sbjct: 74  PTLPTQSCIDFFKFL---RTFESRLRPDLTAVVTLAHRLYSDRRFHEMKSLLNSVASDGF 130

Query: 231 IKRPLAVTVSLVKNC-CKDSRV--STKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVID 401
             RP+    S + +C   + ++  S   FD++FRVY DN  F+E L+ F+YM   GL ID
Sbjct: 131 YGRPVENLGSAMADCEISEGKLEFSETFFDLVFRVYVDNGMFEEGLKVFDYMVGKGLKID 190

Query: 402 ERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLID 581
           ERSCIV+L+A K+  + D  L  F RM++SGV ++VYS+TIVV  LC+RG  +K+++LI 
Sbjct: 191 ERSCIVFLVAAKKRRRIDLCLDIFRRMVDSGVRITVYSLTIVVEGLCRRGEVEKSKKLIK 250

Query: 582 EMRVKGIEPNIITYNTLIDAFIKR 653
           E   KGI+P   TYNT+I+A++K+
Sbjct: 251 EFSSKGIKPEAYTYNTIINAYVKQ 274



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 40/122 (32%), Positives = 65/122 (53%)
 Frame = +3

Query: 291 VSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQALGF 470
           ++  VF+ L   Y       EAL  ++ M+  G   D  +       L R  + D+A  +
Sbjct: 399 ITQVVFNTLINGYCRKGMIDEALTIYDVMEKKGFEADVFTFNTIASCLNRLKRYDEAKQW 458

Query: 471 FYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLIDAFIK 650
            +RM+E GV L+    T ++++ CK G  K+A++L  EM  KG +PN +TYN +I A+ K
Sbjct: 459 LFRMMEGGVRLNTVCYTNLIDVYCKEGNIKEAKRLFVEMSSKGAQPNAVTYNVMIYAYCK 518

Query: 651 RG 656
           +G
Sbjct: 519 QG 520


>ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g32630 gi|20197234|gb|AAM14987.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|330253613|gb|AEC08707.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  170 bits (431), Expect = 3e-40
 Identities = 93/204 (45%), Positives = 131/204 (64%), Gaps = 4/204 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDF-SSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGE 230
           P L T++C+ FF  L   R+F S+ K DL A VT+  RL+ +RRF   + +LNS    G 
Sbjct: 72  PTLPTQSCIDFFKLL---REFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGF 128

Query: 231 IKRPLAVTVSLVKNCC---KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVID 401
            KRP+    S + +C    +      K FD++FRVY DN  F+E L  F+YM   GL ID
Sbjct: 129 YKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSID 188

Query: 402 ERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLID 581
           ERSCIV+L+A K+  + D  L  F RM++SGV ++VYS+TIVV  LC+RG  +K+++LI 
Sbjct: 189 ERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIK 248

Query: 582 EMRVKGIEPNIITYNTLIDAFIKR 653
           E  VKGI+P   TYNT+I+A++K+
Sbjct: 249 EFSVKGIKPEAYTYNTIINAYVKQ 272



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 42/126 (33%), Positives = 67/126 (53%)
 Frame = +3

Query: 279 KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQ 458
           K   ++  VF+ L   Y       EA   ++ M+  G   D  +C        R  + D+
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452

Query: 459 ALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLID 638
           A  + +RM+E GV LS  S T ++++ CK G  ++A++L  EM  KG++PN ITYN +I 
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512

Query: 639 AFIKRG 656
           A+ K+G
Sbjct: 513 AYCKQG 518



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
 Frame = +3

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKV-FDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERS 410
           +R  +    ++K   KD  V  KV + +L  +   N K  +A + F+ M++ G+  D   
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331

Query: 411 CIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMR 590
               +    R     +A   F  + E G+  S Y+   +++ +CK G    A  L++EM+
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391

Query: 591 VKGIEPNIITYNTLIDAFIKRG 656
            KG+    + +NTLID + ++G
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKG 413


>ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325243|gb|EFH55663.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 605

 Score =  169 bits (427), Expect = 9e-40
 Identities = 93/203 (45%), Positives = 132/203 (65%), Gaps = 4/203 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDF-SSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGE 230
           P L T++C+ FF FL   R+F S+ K DL A VT+  RL+ +RRF+  + +LNS    G 
Sbjct: 53  PSLATQSCIDFFKFL---REFESNLKPDLTAVVTLSHRLYSNRRFSEMRLLLNSVVNDGF 109

Query: 231 IKRPLAVTVSLVKNCC---KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVID 401
            +RP+    S + +C    +      K FD++FRVY DN  F+E L  F+YM   GL ID
Sbjct: 110 YERPVEGLGSAMVDCDISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSID 169

Query: 402 ERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLID 581
           ERSCIV+L+A K+  + D  L FF RM++SGV ++VYS+TIVV  LC+RG  +K+++LI 
Sbjct: 170 ERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIK 229

Query: 582 EMRVKGIEPNIITYNTLIDAFIK 650
           E   KGI+P   TYNT+I+A++K
Sbjct: 230 EFSGKGIKPEAYTYNTIINAYLK 252



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/126 (32%), Positives = 66/126 (52%)
 Frame = +3

Query: 279 KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQ 458
           K   ++  VF+ L   Y       EA   ++ M+  G   D  +C        R  + D+
Sbjct: 374 KGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDE 433

Query: 459 ALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLID 638
           A  + +RM+E GV LS  S T ++++ CK G  ++A++L  EM  K ++PN ITYN +I 
Sbjct: 434 AKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIY 493

Query: 639 AFIKRG 656
           A+ K+G
Sbjct: 494 AYCKQG 499


>ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479250|gb|AES60453.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 772

 Score =  167 bits (424), Expect = 2e-39
 Identities = 89/202 (44%), Positives = 133/202 (65%), Gaps = 2/202 (0%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P L+  +CL+FF+FL       S K DL+A++ ++ RLF+ R+F   K ILN      +I
Sbjct: 66  PILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDI 125

Query: 234 KRPLAVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSC 413
           + P++  V LV     +S    K  DMLFRV SDN  F E +  ++Y+++ GLVI+ERSC
Sbjct: 126 ECPVSSIVDLVDEF--ESHFVEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSC 183

Query: 414 IVYLLALKRSDKSDQALGFFYRMLESG-VGLSVYSMTIVVNLLCKRGATKKARQLIDEMR 590
            V LLALKR  + D  + FF+RM+ES    + V S+T+V+++LC+RG  +KA++L+DEM 
Sbjct: 184 FVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMV 243

Query: 591 VKGI-EPNIITYNTLIDAFIKR 653
            KGI +PN+ TYNTL++A++ R
Sbjct: 244 GKGIVKPNVFTYNTLLNAYVGR 265



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/136 (30%), Positives = 67/136 (49%)
 Frame = +3

Query: 246 AVTVSLVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYL 425
           A  + L++   K   ++  +F+     Y    K  EAL     M+  G+  D  +  +  
Sbjct: 375 AAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILA 434

Query: 426 LALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIE 605
             L +  + D+A      M+E GV  +V + T+ + + CK G   +A +L  +M  KG  
Sbjct: 435 NGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEV 494

Query: 606 PNIITYNTLIDAFIKR 653
           PNIITYNTLIDA+ K+
Sbjct: 495 PNIITYNTLIDAYCKK 510



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
 Frame = +3

Query: 75  CLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEIKRPLAVT 254
           C+ FF+ +  +  F      L   + ++CR  +  +   AK++++    +G +K P   T
Sbjct: 199 CVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEK---AKELMDEMVGKGIVK-PNVFT 254

Query: 255 VSLVKNCC---KDSR---------------VSTKVFDMLFRVYSDNNKFQEALETFEYMK 380
            + + N     KD +                S   + +L + YS +   +EA + FE M+
Sbjct: 255 YNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMR 314

Query: 381 DNGLVIDERSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATK 560
           +  + +D       +   +R     +A   F  M +  +  + ++   ++  +CK G  +
Sbjct: 315 EKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQME 374

Query: 561 KARQLIDEMRVKGIEPNIITYNTLIDAFIKRG 656
            A  L+ EM+ KG++ N++ +NT +D + +RG
Sbjct: 375 AAEILLLEMQSKGVDLNLVIFNTTMDGYCRRG 406


>ref|XP_002879120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324959|gb|EFH55379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 483

 Score =  167 bits (423), Expect = 3e-39
 Identities = 86/203 (42%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P +K+  C+S FNF+  N    S++ DL+ ++++  R+  +RRF+ AK++L   AI   +
Sbjct: 57  PDIKSWKCISLFNFILENPSLFSFQPDLRTHLSLTSRVLSERRFSDAKELLKLVAIDDIL 116

Query: 234 KRPLAVTVS-LVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERS 410
           + P  V VS  V  C  ++RV  + F+ +  VYSDN KF E +E FEYMK+N + IDE++
Sbjct: 117 RYPFKVIVSSFVDECGCETRVVARFFNSMLMVYSDNGKFDEVVEVFEYMKNNEVKIDEKA 176

Query: 411 CIVYLLALKRSDKSDQALGFFYRMLESGVG-LSVYSMTIVVNLLCKRGATKKARQLIDEM 587
           C ++LL LK+ D+ + A  FF  M+ESG+  +SVYS+T+VV  LC  G   + R+L++EM
Sbjct: 177 CTLHLLNLKKCDQMELARDFFRLMVESGLDVVSVYSLTVVVTALCCNGEITRGRELVEEM 236

Query: 588 -RVKGIEPNIITYNTLIDAFIKR 653
             VKGI+PNI+T+ ++ID  +KR
Sbjct: 237 VLVKGIKPNIVTFKSMIDCCVKR 259


>ref|XP_006296453.1| hypothetical protein CARUB_v10025637mg [Capsella rubella]
           gi|482565161|gb|EOA29351.1| hypothetical protein
           CARUB_v10025637mg [Capsella rubella]
          Length = 462

 Score =  166 bits (420), Expect = 6e-39
 Identities = 85/203 (41%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P +K+  C+S FNF+  N    S++ DL+ ++++  R+  +RRF+ A++++   AI   +
Sbjct: 57  PNVKSWKCVSLFNFILENPSLFSFQPDLRTHLSLTSRVLSERRFSDAQKLMKPVAIDDIL 116

Query: 234 KRPLAVTVS-LVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERS 410
           + P    VS  V  C  + RV  + F+ +  VYS+N KF E +E FEYMK+N + IDE++
Sbjct: 117 RYPFNAIVSGFVDECVCEERVVARFFNSMLMVYSENGKFDEVVEVFEYMKNNEVKIDEKT 176

Query: 411 CIVYLLALKRSDKSDQALGFFYRMLESGVG-LSVYSMTIVVNLLCKRGATKKARQLIDEM 587
           C ++LL LKR D  D A  FF  M+ESG+  ++VYS+T+VV+ LC  G  K+AR+L++EM
Sbjct: 177 CTLHLLNLKRCDLMDLARDFFGLMVESGLDVVTVYSLTVVVSALCCNGEIKRARELVEEM 236

Query: 588 -RVKGIEPNIITYNTLIDAFIKR 653
             VKGI+PNI+T+ ++ID  +KR
Sbjct: 237 VLVKGIKPNIVTFKSMIDCCVKR 259


>ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Capsella rubella]
           gi|482565199|gb|EOA29389.1| hypothetical protein
           CARUB_v10025677mg [Capsella rubella]
          Length = 627

 Score =  163 bits (413), Expect = 4e-38
 Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 3/203 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P L T++C+ FF +L      S+ K DL A VT+  RL+ +RRF+  + +LNS    G  
Sbjct: 75  PTLPTQSCIDFFKYLRGFE--SNLKPDLTAVVTLAHRLYSNRRFSEMRALLNSVVNDGFY 132

Query: 234 KRPLAVTVSLVKNCCKDSR---VSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDE 404
           +RP+    S +  C             FD++FRVY DN  F+E L+ F+YM   GL IDE
Sbjct: 133 ERPVENLGSAIVECDVSEEKFEFLETFFDLMFRVYVDNAMFEEGLKVFDYMVKKGLSIDE 192

Query: 405 RSCIVYLLALKRSDKSDQALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDE 584
           RSCIV+L+A K+  + D  L FF RM++ GV ++VYS+TIVV  LC+RG  +K+++L+ E
Sbjct: 193 RSCIVFLVAAKKRREIDLCLDFFRRMVDYGVKITVYSLTIVVEGLCRRGEIEKSKKLMKE 252

Query: 585 MRVKGIEPNIITYNTLIDAFIKR 653
              KGI+P   TYNT+I+A++K+
Sbjct: 253 FSRKGIKPEAYTYNTIINAYVKK 275



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 41/126 (32%), Positives = 67/126 (53%)
 Frame = +3

Query: 279 KDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERSCIVYLLALKRSDKSDQ 458
           K   ++  V + L   Y       EAL  ++ M+  G   D  +       L R  + D+
Sbjct: 396 KGVNITQVVLNTLISGYCRKGMIDEALTIYDVMEKKGFEADVYTLNTIASCLNRLKRYDE 455

Query: 459 ALGFFYRMLESGVGLSVYSMTIVVNLLCKRGATKKARQLIDEMRVKGIEPNIITYNTLID 638
           A  + +RM+E GV LS  S T ++++ CK G  ++A++L  EM  KG++PN ITYN ++ 
Sbjct: 456 AKQWLFRMMEGGVRLSTVSYTNLMDVYCKEGNVEEAKRLFLEMGSKGVQPNAITYNVMMY 515

Query: 639 AFIKRG 656
           A+ K+G
Sbjct: 516 AYCKQG 521


>ref|NP_180372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75268044|sp|Q9ZUU7.1|PP174_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g28050 gi|4063753|gb|AAC98461.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|20197952|gb|AAM15326.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|330252979|gb|AEC08073.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  162 bits (410), Expect = 9e-38
 Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
 Frame = +3

Query: 54  PRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIVCRLFKDRRFTMAKQILNSAAIQGEI 233
           P +K+  C+S FNF+  N    S++ DL+ ++++  R+  +RRF+ AK++L   AI   +
Sbjct: 57  PDIKSWKCISLFNFILENPSLFSFQPDLRTHLSLTFRVLSERRFSYAKELLKPVAIDDIL 116

Query: 234 KRPLAVTVS-LVKNCCKDSRVSTKVFDMLFRVYSDNNKFQEALETFEYMKDNGLVIDERS 410
           + P  V VS ++  C  + +V  + F+ +  VYSDN KF E +E FEYMK+N + IDE++
Sbjct: 117 RYPFNVIVSSVIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKT 176

Query: 411 CIVYLLALKRSDKSDQALGFFYRMLESGVG-LSVYSMTIVVNLLCKRGATKKARQLIDEM 587
           C ++LL LKR D+ + A  FF  M+ESG+  ++VYS+T+VV +LC  G   +AR+L++EM
Sbjct: 177 CTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM 236

Query: 588 -RVKGIEPNIITYNTLIDAFIKR 653
             VKG++ NI+T+ ++I   +KR
Sbjct: 237 GLVKGVKANIVTFKSMIGCCVKR 259