BLASTX nr result

ID: Sinomenium21_contig00042382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00042382
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007226092.1| hypothetical protein PRUPE_ppa010814mg [Prun...    58   1e-06
ref|XP_006845609.1| hypothetical protein AMTR_s00019p00209010 [A...    57   3e-06
ref|XP_001765451.1| predicted protein [Physcomitrella patens] gi...    57   3e-06
gb|EMS52832.1| 39S ribosomal protein L28, mitochondrial [Triticu...    57   3e-06
ref|XP_006657801.1| PREDICTED: 54S ribosomal protein L24, mitoch...    56   4e-06
ref|NP_001059912.1| Os07g0544900 [Oryza sativa Japonica Group] g...    56   4e-06
ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitoch...    56   4e-06
emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]    56   4e-06
ref|XP_007011601.1| Ribosomal L28 family, putative [Theobroma ca...    55   1e-05

>ref|XP_007226092.1| hypothetical protein PRUPE_ppa010814mg [Prunus persica]
           gi|462423028|gb|EMJ27291.1| hypothetical protein
           PRUPE_ppa010814mg [Prunus persica]
          Length = 235

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRGIYAGRHIQFGNQISEDGGNK
Sbjct: 61  GRAKRGIYAGRHIQFGNQISEDGGNK 86


>ref|XP_006845609.1| hypothetical protein AMTR_s00019p00209010 [Amborella trichopoda]
           gi|548848181|gb|ERN07284.1| hypothetical protein
           AMTR_s00019p00209010 [Amborella trichopoda]
          Length = 223

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRG+YAGRHIQFGNQ+SEDGGNK
Sbjct: 41  GRAKRGLYAGRHIQFGNQVSEDGGNK 66


>ref|XP_001765451.1| predicted protein [Physcomitrella patens]
          gi|162683301|gb|EDQ69712.1| predicted protein
          [Physcomitrella patens]
          Length = 108

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1  GRAKRGIYAGRHIQFGNQISEDGGNK 78
          GRAKRG+YAGRHIQFGNQ+SEDGGNK
Sbjct: 6  GRAKRGLYAGRHIQFGNQVSEDGGNK 31


>gb|EMS52832.1| 39S ribosomal protein L28, mitochondrial [Triticum urartu]
          Length = 309

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK*SSLIL 96
           GRAKRGI+AGRHIQFGN++SEDGGNK   L+L
Sbjct: 42  GRAKRGIFAGRHIQFGNKVSEDGGNKGRRLVL 73


>ref|XP_006657801.1| PREDICTED: 54S ribosomal protein L24, mitochondrial-like isoform X1
           [Oryza brachyantha] gi|573951031|ref|XP_006657802.1|
           PREDICTED: 54S ribosomal protein L24, mitochondrial-like
           isoform X2 [Oryza brachyantha]
          Length = 204

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRGIYAGRHIQFGN++SEDGGNK
Sbjct: 42  GRAKRGIYAGRHIQFGNKVSEDGGNK 67


>ref|NP_001059912.1| Os07g0544900 [Oryza sativa Japonica Group]
           gi|34393259|dbj|BAC83129.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611448|dbj|BAF21826.1|
           Os07g0544900 [Oryza sativa Japonica Group]
           gi|125558698|gb|EAZ04234.1| hypothetical protein
           OsI_26378 [Oryza sativa Indica Group]
           gi|125600612|gb|EAZ40188.1| hypothetical protein
           OsJ_24633 [Oryza sativa Japonica Group]
          Length = 204

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRGIYAGRHIQFGN++SEDGGNK
Sbjct: 42  GRAKRGIYAGRHIQFGNKVSEDGGNK 67


>ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitochondrial [Vitis
           vinifera] gi|302142683|emb|CBI19886.3| unnamed protein
           product [Vitis vinifera]
          Length = 216

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRGIYAGRHIQFGN++SEDGGNK
Sbjct: 37  GRAKRGIYAGRHIQFGNRVSEDGGNK 62


>emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]
          Length = 1084

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   GRAKRGIYAGRHIQFGNQISEDGGNK 78
           GRAKRGIYAGRHIQFGN++SEDGGNK
Sbjct: 37  GRAKRGIYAGRHIQFGNRVSEDGGNK 62


>ref|XP_007011601.1| Ribosomal L28 family, putative [Theobroma cacao]
           gi|508781964|gb|EOY29220.1| Ribosomal L28 family,
           putative [Theobroma cacao]
          Length = 258

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +1

Query: 4   RAKRGIYAGRHIQFGNQISEDGGNK*SSLILCLNNCY 114
           RAKRG+YAGRHIQFGN+ISEDGGNK   L   +  C+
Sbjct: 42  RAKRGLYAGRHIQFGNRISEDGGNKYFFLFHSITPCF 78


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