BLASTX nr result
ID: Sinomenium21_contig00042222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00042222
(857 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 132 2e-28
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 130 8e-28
ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 129 1e-27
ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 129 2e-27
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 129 2e-27
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 128 2e-27
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p... 128 2e-27
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 127 4e-27
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 127 4e-27
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 127 4e-27
ref|XP_007139381.1| hypothetical protein PHAVU_008G024600g [Phas... 127 5e-27
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 127 5e-27
emb|CBL69149.1| RNA polymerase [Nuphar advena] 127 5e-27
emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera] 127 5e-27
gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus... 127 7e-27
ref|XP_007156393.1| hypothetical protein PHAVU_003G282700g [Phas... 127 7e-27
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu... 127 7e-27
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 127 7e-27
ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 127 7e-27
ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 127 7e-27
>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 1262
Score = 132 bits (332), Expect = 2e-28
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE+L+ESFQQ+FPT TFPPLPERGDF L
Sbjct: 1192 GVHDSYWTHACDVDVMNRILREKFVELYETPILERLLESFQQSFPTLTFPPLPERGDFEL 1251
Query: 677 KEVLGSTYFFN 645
++VL S YFFN
Sbjct: 1252 RDVLESPYFFN 1262
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 130 bits (326), Expect = 8e-28
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE PVLE L+ESFQQ+FPT +FPPLPERGDF+L
Sbjct: 519 GVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDFDL 578
Query: 677 KEVLGSTYFFN 645
++VL S YFFN
Sbjct: 579 QDVLKSPYFFN 589
>ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 984
Score = 129 bits (324), Expect = 1e-27
Identities = 58/71 (81%), Positives = 63/71 (88%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L+ESF+Q+FP FPPLPERG+FNL
Sbjct: 914 GVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEQSFPALDFPPLPERGEFNL 973
Query: 677 KEVLGSTYFFN 645
KEVL S YFFN
Sbjct: 974 KEVLDSPYFFN 984
>ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 957
Score = 129 bits (323), Expect = 2e-27
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELY+ P+LE L+ESFQ+ FP FPPLPERGDF+L
Sbjct: 887 GVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALNFPPLPERGDFDL 946
Query: 677 KEVLGSTYFFN 645
+EVLGS YFFN
Sbjct: 947 QEVLGSAYFFN 957
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 129 bits (323), Expect = 2e-27
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L++SFQ++FP FPPLPERGDF+L
Sbjct: 956 GVHDSYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGDFDL 1015
Query: 677 KEVLGSTYFFN 645
+EVLGS YFFN
Sbjct: 1016 REVLGSPYFFN 1026
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 128 bits (322), Expect = 2e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACD+D MNRILREKFVELYE P+LE L+E FQQ+FPT TFPPLP+RGDF+L
Sbjct: 936 GVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDL 995
Query: 677 KEVLGSTYFFN 645
++VL S YFFN
Sbjct: 996 RDVLESPYFFN 1006
>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
[Chenopodium album]
Length = 988
Score = 128 bits (322), Expect = 2e-27
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MN+ILREKFVELYE+P+LE L+ESFQ++FPT FPPLPERGDF+L
Sbjct: 918 GVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQESFPTLQFPPLPERGDFDL 977
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 978 REVLESPYFFN 988
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 127 bits (320), Expect = 4e-27
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L+ESFQ +FP FPPLPERGDF+L
Sbjct: 792 GVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFPPLPERGDFDL 851
Query: 677 KEVLGSTYFFN 645
++VL STYFFN
Sbjct: 852 RDVLQSTYFFN 862
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 127 bits (320), Expect = 4e-27
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L+ESFQ++FP+ FPPLPERGDF+L
Sbjct: 926 GVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDL 985
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 986 REVLESPYFFN 996
>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 949
Score = 127 bits (320), Expect = 4e-27
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELY+ P+LE L+ESFQ+ FP FPPLPERGDF+L
Sbjct: 879 GVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALNFPPLPERGDFDL 938
Query: 677 KEVLGSTYFFN 645
+EVL STYFFN
Sbjct: 939 QEVLESTYFFN 949
>ref|XP_007139381.1| hypothetical protein PHAVU_008G024600g [Phaseolus vulgaris]
gi|561012514|gb|ESW11375.1| hypothetical protein
PHAVU_008G024600g [Phaseolus vulgaris]
Length = 1068
Score = 127 bits (319), Expect = 5e-27
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNR+LREKFVELYE PVLE L+ESFQ +FP+ +FPPLPERGDF+L
Sbjct: 998 GVHDSYWTHACDVDKMNRLLREKFVELYETPVLENLLESFQSSFPSLSFPPLPERGDFDL 1057
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 1058 REVLESPYFFN 1068
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 127 bits (319), Expect = 5e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MN+ILREKFV+LYE P+LE L+ESFQQ+FP TFPPLPERGDF+L
Sbjct: 954 GVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDL 1013
Query: 677 KEVLGSTYFFN 645
++VL S YFFN
Sbjct: 1014 RDVLESPYFFN 1024
>emb|CBL69149.1| RNA polymerase [Nuphar advena]
Length = 996
Score = 127 bits (319), Expect = 5e-27
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD +NRILREKFVELYE+P+LE L+E FQ++FP +FPPLP+RGDF+L
Sbjct: 926 GVHDSYWTHACDVDEINRILREKFVELYEQPILENLLEGFQKSFPKFSFPPLPDRGDFDL 985
Query: 677 KEVLGSTYFFN 645
KEVL STYFFN
Sbjct: 986 KEVLQSTYFFN 996
>emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera]
Length = 168
Score = 127 bits (319), Expect = 5e-27
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFV+LYE P+LE L+ESFQQ+FP FPPLPERGDF+L
Sbjct: 98 GVHDSYWTHACDVDEMNRILREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDL 157
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 158 REVLESPYFFN 168
>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
Length = 1021
Score = 127 bits (318), Expect = 7e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD M+RILREKFVELYE P+LE L+E FQQ+FPT TFPPLP+RGDF+L
Sbjct: 951 GVHDSYWTHACDVDEMSRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDL 1010
Query: 677 KEVLGSTYFFN 645
++VL S YFFN
Sbjct: 1011 RDVLESPYFFN 1021
>ref|XP_007156393.1| hypothetical protein PHAVU_003G282700g [Phaseolus vulgaris]
gi|561029747|gb|ESW28387.1| hypothetical protein
PHAVU_003G282700g [Phaseolus vulgaris]
Length = 959
Score = 127 bits (318), Expect = 7e-27
Identities = 58/71 (81%), Positives = 62/71 (87%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L ESFQ+ FPT FPPLP RGDF+L
Sbjct: 889 GVHDSYWTHACDVDEMNRILREKFVELYEAPILENLSESFQKNFPTLNFPPLPARGDFDL 948
Query: 677 KEVLGSTYFFN 645
+EVL STYFFN
Sbjct: 949 REVLESTYFFN 959
>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
gi|550320354|gb|ERP51329.1| hypothetical protein
POPTR_0017s14590g [Populus trichocarpa]
Length = 987
Score = 127 bits (318), Expect = 7e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MNRILREKFVELYE P+LE L+ESF+++FPT +FPPLP+RGDF L
Sbjct: 917 GVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFEL 976
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 977 REVLESPYFFN 987
>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X3 [Cicer
arietinum]
Length = 1053
Score = 127 bits (318), Expect = 7e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MN+ILREKFVELYE P+LE L+ESFQ++FP+ FPPLPERGDF+L
Sbjct: 983 GVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFPPLPERGDFDL 1042
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 1043 REVLESPYFFN 1053
>ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X2 [Cicer
arietinum]
Length = 1090
Score = 127 bits (318), Expect = 7e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MN+ILREKFVELYE P+LE L+ESFQ++FP+ FPPLPERGDF+L
Sbjct: 1020 GVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFPPLPERGDFDL 1079
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 1080 REVLESPYFFN 1090
>ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 127 bits (318), Expect = 7e-27
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 857 GVHDSYWTHACDVDTMNRILREKFVELYEKPVLEKLMESFQQAFPTSTFPPLPERGDFNL 678
GVHDSYWTHACDVD MN+ILREKFVELYE P+LE L+ESFQ++FP+ FPPLPERGDF+L
Sbjct: 1056 GVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFPPLPERGDFDL 1115
Query: 677 KEVLGSTYFFN 645
+EVL S YFFN
Sbjct: 1116 REVLESPYFFN 1126