BLASTX nr result
ID: Sinomenium21_contig00042198
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00042198 (623 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] 214 2e-53 emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 211 1e-52 emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 208 1e-51 emb|CAN83592.1| hypothetical protein VITISV_031653 [Vitis vinifera] 206 5e-51 emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 205 8e-51 ref|XP_006384576.1| hypothetical protein POPTR_0004s18110g, part... 176 7e-42 emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 159 5e-37 emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] 159 8e-37 emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera] 139 9e-31 emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera] 132 6e-29 emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] 132 6e-29 emb|CAN63753.1| hypothetical protein VITISV_005664 [Vitis vinifera] 130 3e-28 emb|CAN77528.1| hypothetical protein VITISV_041424 [Vitis vinifera] 128 2e-27 emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera] 105 8e-21 emb|CAN62521.1| hypothetical protein VITISV_039719 [Vitis vinifera] 105 1e-20 emb|CAN79705.1| hypothetical protein VITISV_040679 [Vitis vinifera] 103 3e-20 gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana] 100 6e-19 gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 99 1e-18 emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 97 5e-18 gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 96 7e-18 >emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] Length = 787 Score = 214 bits (544), Expect = 2e-53 Identities = 112/162 (69%), Positives = 126/162 (77%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MAS+SS LLPFN +IH++TIKLSSSNYLLWKS L PLLESQ LLG+VDGTLVPPP F P Sbjct: 1 MASESSH-LLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLGYVDGTLVPPPRFEP 59 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 TS T S ++LAWKAADQR L EEA+A +G+ST+REV LENTFSH SKAR Sbjct: 60 ATSTTLSTKYLAWKAADQRLLCLLLSSLTEEAIAAVVGLSTAREVWLALENTFSHHSKAR 119 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 E+RLKDDLQLMKR T P+ YAR FK LCDQLH I RPV+ T Sbjct: 120 ELRLKDDLQLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDT 161 >emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] Length = 1239 Score = 211 bits (537), Expect = 1e-52 Identities = 111/162 (68%), Positives = 125/162 (77%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MAS+SS LLPFN +IH++TIKLSSSNYLLWKS L PLLESQ LL +VDGTLVPPP F P Sbjct: 1 MASESSH-LLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPRFEP 59 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 TS T S ++LAWKAADQR L EEA+A +G+ST+REV LENTFSH SKAR Sbjct: 60 ETSTTLSTKYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKAR 119 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 E+RLKDDLQLMKR T P+ YAR FK LCDQLH I RPV+ T Sbjct: 120 ELRLKDDLQLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDT 161 >emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] Length = 1501 Score = 208 bits (529), Expect = 1e-51 Identities = 110/162 (67%), Positives = 124/162 (76%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MAS+SS LLPFN +IH++TIKLSSSNYLLWKS L PLLESQ LL +VDGTLVPPP F P Sbjct: 1 MASESSH-LLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPRFEP 59 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 TS T S ++LAWKAADQR L EEA+A +G+ST+REV LENTFSH SKAR Sbjct: 60 ETSTTLSTKYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKAR 119 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 E+RLKDDLQLMK T P+ YAR FK LCDQLH I RPV+ T Sbjct: 120 ELRLKDDLQLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDT 161 >emb|CAN83592.1| hypothetical protein VITISV_031653 [Vitis vinifera] Length = 495 Score = 206 bits (524), Expect = 5e-51 Identities = 108/162 (66%), Positives = 122/162 (75%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MA + SSTL PFN +IH+VTIKLSSSNYLLWKS L PLLESQ L+G++DGT PP F Sbjct: 1 MAVEPSSTLFPFNTLIHMVTIKLSSSNYLLWKSQLLPLLESQELIGYMDGTTEIPPRFTS 60 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 SQ P+ +H+ WK DQR L EEAMAE + +STSREV LENTFSHRSKAR Sbjct: 61 ENSQKPNIKHVVWKHTDQRLLSLLLSSLTEEAMAEVVELSTSREVWVALENTFSHRSKAR 120 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 EIRLKDDLQLMKR T ++ YARAFKALC+QLH I RPVDGT Sbjct: 121 EIRLKDDLQLMKRGTRSVSEYARAFKALCNQLHAIGRPVDGT 162 >emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] Length = 1207 Score = 205 bits (522), Expect = 8e-51 Identities = 109/162 (67%), Positives = 125/162 (77%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MAS+SS LLPFN +IH++TI+LSSSNYLLWKS L PLLESQ LLG+VDGTLVP P F P Sbjct: 1 MASESSH-LLPFNTLIHMITIELSSSNYLLWKSQLLPLLESQDLLGYVDGTLVPLPRFEP 59 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 TS S ++LAWKAADQR L EEA+A +G+ST+REV LENTFSH SKAR Sbjct: 60 VTSTILSTKYLAWKAADQRLLCLLLSSLTEEAIATVVGLSTAREVWLALENTFSHHSKAR 119 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 E+RLKDDLQLMKRST P+ +AR FK LCDQLH I RPV+ T Sbjct: 120 ELRLKDDLQLMKRSTKPVAEHARTFKTLCDQLHAIGRPVEDT 161 >ref|XP_006384576.1| hypothetical protein POPTR_0004s18110g, partial [Populus trichocarpa] gi|550341298|gb|ERP62373.1| hypothetical protein POPTR_0004s18110g, partial [Populus trichocarpa] Length = 317 Score = 176 bits (445), Expect = 7e-42 Identities = 87/160 (54%), Positives = 113/160 (70%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MA+ + S LPF +IH++ +KLSS+NYL+W S + PL+E Q L+GHVDG++VPPP F+ Sbjct: 1 MATKNPSAPLPFTTLIHMIIVKLSSANYLIWHSQILPLIEIQDLVGHVDGSIVPPPKFDS 60 Query: 306 PTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 P SQTP++++LAWKA DQR L EEA+AE +G ST+ V LE TF+H+ K R Sbjct: 61 PNSQTPNDKYLAWKAIDQRLLCLLRSSLTEEALAEIVGFSTAHGVWLALETTFNHKYKTR 120 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 EI LKD+LQ MKR+T +T AR FK CDQLH I R VD Sbjct: 121 EIHLKDELQSMKRATRSVTDIARVFKGFCDQLHTIGRLVD 160 >emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] Length = 1453 Score = 159 bits (403), Expect = 5e-37 Identities = 81/153 (52%), Positives = 109/153 (71%), Gaps = 2/153 (1%) Frame = -3 Query: 453 FNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP--PTSQTPSNE 280 FN MIH++TIKLSS+NYLLW++ L PLL+ Q LL HVDG++ PPP+ +S P+ + Sbjct: 8 FNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQ 67 Query: 279 HLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAREIRLKDDLQ 100 ++AW+ DQR L EEAM E +G++T+R+V LEN+FSH SK E+R+KDDLQ Sbjct: 68 YVAWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRIKDDLQ 127 Query: 99 LMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 L+KR T +T Y+R+FKALCDQL + R VD T Sbjct: 128 LIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDT 160 >emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] Length = 1095 Score = 159 bits (401), Expect = 8e-37 Identities = 81/153 (52%), Positives = 109/153 (71%), Gaps = 2/153 (1%) Frame = -3 Query: 453 FNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP--PTSQTPSNE 280 FN MIH++TIKLSS+NYLLW++ L PLL+ Q LL HVDG++ P P+ +S P+ + Sbjct: 8 FNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPSPITIAVDSSSSQPNPQ 67 Query: 279 HLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAREIRLKDDLQ 100 ++AW+ DQR L EEAMAE +G++ +R+V LEN+FSH SK RE+R+KDDLQ Sbjct: 68 YVAWQLQDQRLLSLLFSSLTEEAMAEVLGLTIARDVWLALENSFSHISKTRELRIKDDLQ 127 Query: 99 LMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 L+KR T +T Y+R+FKALCDQL + R VD T Sbjct: 128 LIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDT 160 >emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera] Length = 430 Score = 139 bits (349), Expect = 9e-31 Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 2/165 (1%) Frame = -3 Query: 489 LMASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPP-PLF 313 ++ S S LP N M+H++TIKL+SSNYLLW++ PLL SQ L G++DG++ P P+ Sbjct: 1 MVVSSPSPPTLPLNTMVHMLTIKLTSSNYLLWRNQFVPLLASQELFGYLDGSIAAPSPMI 60 Query: 312 NPPTSQTPSNE-HLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRS 136 + SN + +W DQ L EE+M+E +G S E + LE +FSHRS Sbjct: 61 TASDGTSKSNPAYTSWLHTDQTLLSLLYSSLTEESMSEVLGFRHSHEAWHALEVSFSHRS 120 Query: 135 KAREIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 K RE++LKD+LQLM R + I ++R FK LCDQL I RP+D T Sbjct: 121 KTRELQLKDELQLMHRGSQSIAEFSRTFKGLCDQLVAIGRPIDDT 165 >emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera] Length = 314 Score = 132 bits (333), Expect = 6e-29 Identities = 73/163 (44%), Positives = 101/163 (61%), Gaps = 2/163 (1%) Frame = -3 Query: 489 LMASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGT-LVPPPLF 313 + S SSS+ LP N M+H++TIK++S NYLLW++ PLL SQ LLG +DG+ L P P Sbjct: 1 MATSSSSSSPLPLNTMVHMLTIKVTSFNYLLWRNQFIPLLTSQDLLGFLDGSVLAPSPQV 60 Query: 312 NPPTSQTPSNE-HLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRS 136 T N + +W DQ L EE+M+E +G+S + E TLE +FSHRS Sbjct: 61 TDSNGTTQVNPAYTSWLTTDQTLLSLLYSSLTEESMSEVLGLSHAHEAWTTLEASFSHRS 120 Query: 135 KAREIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 K RE++LKD+LQLM+R + + ++R K L DQL I RP+D Sbjct: 121 KTRELQLKDELQLMQRGSKSVAEFSRLSKRLYDQLAAIGRPID 163 >emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] Length = 1212 Score = 132 bits (333), Expect = 6e-29 Identities = 74/162 (45%), Positives = 99/162 (61%), Gaps = 2/162 (1%) Frame = -3 Query: 480 SDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTL-VPPPLFNPP 304 S SSS+ LP N M+H++TIKL+SSNYLLWK+ PLL SQ L ++DG++ P Sbjct: 4 SASSSSSLPLNTMVHMLTIKLTSSNYLLWKNQFVPLLASQDLFSYLDGSIRAPSTTILAA 63 Query: 303 TSQTPSNE-HLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAR 127 T SN + +W DQ L EE+M+E +G+ S E +TLE +FSHRSK R Sbjct: 64 YGTTKSNPVYTSWLHTDQTLLSLLYYSLTEESMSEVLGLCHSHEAWHTLEVSFSHRSKTR 123 Query: 126 EIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVDGT 1 E++ KD+LQLM+ I ++ FK LCDQL I RP+D T Sbjct: 124 ELQFKDELQLMQXGFQSIAEFSSTFKGLCDQLAAIGRPIDDT 165 >emb|CAN63753.1| hypothetical protein VITISV_005664 [Vitis vinifera] Length = 439 Score = 130 bits (327), Expect = 3e-28 Identities = 63/78 (80%), Positives = 68/78 (87%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFNP 307 MASDSSSTLLPFN MIH+ TIKLSSSNYLLWKS L P LESQGLLGHVDG+ PPP F+P Sbjct: 1 MASDSSSTLLPFNTMIHMGTIKLSSSNYLLWKSXLLPFLESQGLLGHVDGSFEPPPPFDP 60 Query: 306 PTSQTPSNEHLAWKAADQ 253 PTSQTP+ +HLAWKA DQ Sbjct: 61 PTSQTPNTKHLAWKAXDQ 78 >emb|CAN77528.1| hypothetical protein VITISV_041424 [Vitis vinifera] Length = 705 Score = 128 bits (321), Expect = 2e-27 Identities = 66/106 (62%), Positives = 77/106 (72%) Frame = -3 Query: 489 LMASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPPLFN 310 ++ ++S TLLPFN MIH+VTIKLSSSNYLLWKS L PLLE Q LL HVDGTL PPP F Sbjct: 1 MVVENTSPTLLPFNTMIHMVTIKLSSSNYLLWKSQLLPLLEIQELLDHVDGTLAPPPWFA 60 Query: 309 PPTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV 172 P SQTP+ +H AWK +QR L +EAM E +G+STSREV Sbjct: 61 PGDSQTPNIKHFAWKNINQRFFSLLLSSLTKEAMVEVVGLSTSREV 106 >emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera] Length = 717 Score = 105 bits (263), Expect = 8e-21 Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 2/140 (1%) Frame = -3 Query: 489 LMASDSSSTLLPFNVMIHVVTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTL-VPPPLF 313 + S SSS+ LP N M+H++TIKL+SSNYLLW++ PLL SQ LLG +DG++ P P Sbjct: 1 MATSSSSSSPLPLNTMVHMLTIKLTSSNYLLWRNQFIPLLTSQDLLGFLDGSVPAPSPKV 60 Query: 312 NPPTSQTPSN-EHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRS 136 S T N + +W DQ L +E+M+E +G+S + + TLE FSHRS Sbjct: 61 IGSNSITQVNPAYTSWLTTDQTLLNLLYSSLTKESMSEVLGLSHAHKAWTTLEAFFSHRS 120 Query: 135 KAREIRLKDDLQLMKRSTCP 76 K RE++LKD+LQ + P Sbjct: 121 KTRELQLKDELQRCSEARNP 140 >emb|CAN62521.1| hypothetical protein VITISV_039719 [Vitis vinifera] Length = 621 Score = 105 bits (262), Expect = 1e-20 Identities = 52/70 (74%), Positives = 57/70 (81%) Frame = -3 Query: 210 MAETIGVSTSREV*NTLENTFSHRSKAREIRLKDDLQLMKRSTCPITAYARAFKALCDQL 31 MAE +G+STSREV LENTFSHRSKAREIR KDDLQLM+R T +T YARAFK LCD+L Sbjct: 1 MAEVMGLSTSREVWLALENTFSHRSKAREIRFKDDLQLMRRGTRSVTEYARAFKVLCDEL 60 Query: 30 HVISRPVDGT 1 H I RPVD T Sbjct: 61 HAIGRPVDNT 70 >emb|CAN79705.1| hypothetical protein VITISV_040679 [Vitis vinifera] Length = 192 Score = 103 bits (258), Expect = 3e-20 Identities = 51/70 (72%), Positives = 56/70 (80%) Frame = -3 Query: 210 MAETIGVSTSREV*NTLENTFSHRSKAREIRLKDDLQLMKRSTCPITAYARAFKALCDQL 31 M E +G+STSREV LENTFSH SKA E+ LKDDLQL+KR T P+ AYA AFKALCDQL Sbjct: 1 MVEAVGLSTSREVWTALENTFSHHSKAHEMCLKDDLQLIKRGTRPVVAYACAFKALCDQL 60 Query: 30 HVISRPVDGT 1 H I RPVDGT Sbjct: 61 HAIGRPVDGT 70 >gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana] Length = 361 Score = 99.8 bits (247), Expect = 6e-19 Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Frame = -3 Query: 486 MASDSSSTLLPFNVMIHV---VTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPP- 319 + DS + PF +HV VT+KL+ SNYLLWK+ LL SQ L+G V+G + PP Sbjct: 61 LTGDSMAPAYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQ 120 Query: 318 ----LFNPPTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENT 151 + + TS+ P+ ++ W DQ L EE + ++TSR++ +L Sbjct: 121 TRLVVNDDVTSEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAEN 180 Query: 150 FSHRSKAREIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 F+ S ARE L+ +LQL+ + ++ Y R FK +CD L I +PV+ Sbjct: 181 FNKSSIAREFSLRRNLQLLTKKDKSLSLYCRDFKIICDSLSSIGKPVE 228 >gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb|AF080119 and is a member of the reverse transcriptase family PF|00078 [Arabidopsis thaliana] Length = 1415 Score = 99.0 bits (245), Expect = 1e-18 Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 8/162 (4%) Frame = -3 Query: 468 STLLPFNVMIHV---VTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPP-----LF 313 +T PF +HV VT+KL+ SNYLLWK+ LL SQ L+G V+G + P + Sbjct: 2 ATSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVN 61 Query: 312 NPPTSQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSK 133 TS+ P+ + +W DQ L EE + +STSR++ +L F+ S Sbjct: 62 GEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSV 121 Query: 132 AREIRLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 ARE L+ +LQL+ + P + Y R FK +CD L I +PVD Sbjct: 122 AREFSLRQNLQLLSKKEKPFSVYCREFKTICDALSSIGKPVD 163 >emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] Length = 1466 Score = 96.7 bits (239), Expect = 5e-18 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 8/158 (5%) Frame = -3 Query: 456 PFNVMIHV---VTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPP-----LFNPPT 301 PF +HV VT+KL+ SNYLLWK+ LL SQ L+G V+G + PP + + T Sbjct: 6 PFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVT 65 Query: 300 SQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAREI 121 S+ P+ ++ W DQ L EE + ++TSR++ +L F+ S ARE Sbjct: 66 SEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREF 125 Query: 120 RLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 L+ +LQL+ + ++ Y R FK +CD L I +PV+ Sbjct: 126 SLRRNLQLLTKKDKSLSVYCRDFKIICDSLSSIGKPVE 163 >gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] Length = 1309 Score = 96.3 bits (238), Expect = 7e-18 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 8/158 (5%) Frame = -3 Query: 456 PFNVMIHV---VTIKLSSSNYLLWKS*LPPLLESQGLLGHVDGTLVPPP-----LFNPPT 301 PF +HV VT+KL+ SNYLLWK+ LL SQ L+G V+G + PP + + T Sbjct: 6 PFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVT 65 Query: 300 SQTPSNEHLAWKAADQRXXXXXXXXLIEEAMAETIGVSTSREV*NTLENTFSHRSKAREI 121 S+ P+ ++ W DQ L EE + ++TSR++ +L F+ S ARE Sbjct: 66 SEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREF 125 Query: 120 RLKDDLQLMKRSTCPITAYARAFKALCDQLHVISRPVD 7 L+ +LQL+ + ++ Y R FK +CD L I +PV+ Sbjct: 126 SLRRNLQLLTKKDKSLSLYCRDFKIICDSLSSIGKPVE 163