BLASTX nr result

ID: Sinomenium21_contig00042167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00042167
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...    65   1e-08
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...    65   1e-08
emb|CBI34885.3| unnamed protein product [Vitis vinifera]               65   1e-08
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]    65   1e-08

>ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Citrus sinensis]
          Length = 734

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 43/62 (69%)
 Frame = +1

Query: 136 IKRSVVSLSSINPKTSLKAYKETCIFLLKSCSNQGWVCGGRSLHGRLIKMGISSDRYIAI 315
           +K S+ SL SINP+TS  +Y ETC+ LLK  ++Q  V  GR+LHG LIK GI  +RY+  
Sbjct: 1   MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60

Query: 316 KI 321
           ++
Sbjct: 61  RL 62


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 154 SLSSINPKTSLKAYKETCIFLLKSCSNQGWVCGGRSLHGRLIKMGISSDRYIAIKI 321
           +L +I+PK S +AY +TC+ LLK  SNQG +  G  LH  LIK G SS RYIAIK+
Sbjct: 7   TLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = +1

Query: 136 IKRSVVSLSSINPKTSLKAYKETCIFLLKSCSNQGWVCGGRSLHGRLIKMGISSDRYIAI 315
           +K ++ +L +INP T  K Y +TC+ LLK+ +NQG +  G +LH  L K GISS++YI+I
Sbjct: 1   MKNTLKTLLAINPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISI 60

Query: 316 KI 321
           K+
Sbjct: 61  KL 62


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 154 SLSSINPKTSLKAYKETCIFLLKSCSNQGWVCGGRSLHGRLIKMGISSDRYIAIKI 321
           +L +I+PK S +AY +TC+ LLK  SNQG +  G  LH  LIK G SS RYIAIK+
Sbjct: 7   TLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 154 SLSSINPKTSLKAYKETCIFLLKSCSNQGWVCGGRSLHGRLIKMGISSDRYIAIKI 321
           +L +I+PK S +AY +TC+ LLK  SNQG +  G  LH  LIK G SS RYIAIK+
Sbjct: 7   TLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62


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