BLASTX nr result

ID: Sinomenium21_contig00042164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00042164
         (548 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera]    44   5e-07
emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]    44   1e-06
emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera]    46   5e-06

>emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera]
          Length = 2825

 Score = 43.9 bits (102), Expect(2) = 5e-07
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -3

Query: 450 EKLDLILLHKSKQVNNDRSLLGCRWQSRFKEWISLLALGLTGGIL-VWD 307
           E  D++++ ++K+   DR  +G  W  R K+W++L A G +GGIL +WD
Sbjct: 647 ENPDVVMIQETKKEKCDRRFVGSVWTIRNKDWVALPACGASGGILIIWD 695



 Score = 35.4 bits (80), Expect(2) = 5e-07
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -1

Query: 545 SGYLCCSMKLLSWNIRCCDSPNKRCIIRKVL 453
           +G +C SMK++SWN+R   S NKR +++  L
Sbjct: 614 TGSVCFSMKIISWNVRGLGSRNKRRVVKDFL 644


>emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -3

Query: 450 EKLDLILLHKSKQVNNDRSLLGCRWQSRFKEWISLLALGLTGGIL-VWD 307
           E  D++++ ++K+ N DR  +G  W  R K+W++L   G +GGIL +WD
Sbjct: 89  ENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPXSGASGGILIIWD 137



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -1

Query: 545 SGYLCCSMKLLSWNIRCCDSPNKRCIIRKVL 453
           +G LC  MK++SWN+R   S NKR +++  L
Sbjct: 56  TGSLCFPMKIISWNVRGLGSRNKRRMVKDFL 86


>emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera]
          Length = 1672

 Score = 45.8 bits (107), Expect(2) = 5e-06
 Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -3

Query: 450 EKLDLILLHKSKQVNNDRSLLGCRWQSRFKEWISLLALGLTGGIL-VWD 307
           E  D++++ ++K+ N DR  +G  W  R K+W++L A G +GGIL +WD
Sbjct: 694 ENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGASGGILIIWD 742



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 548 RSGYLCCSMKLLSWNIRCCDSPNKRCIIRKVL 453
           R G LC  MK++S N+R   S NKR +++  L
Sbjct: 660 RLGSLCFPMKIISXNVRGLGSRNKRRMVKDFL 691


Top