BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00041872
         (252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   112   5e-23
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   112   5e-23
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   112   7e-23
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   111   1e-22
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   111   1e-22
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...   110   2e-22
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   107   1e-21
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   107   2e-21
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   106   4e-21
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   106   4e-21
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   102   5e-20
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   102   5e-20
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   101   9e-20
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   100   2e-19
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    99   5e-19
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...    99   5e-19
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...    99   6e-19
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]      99   6e-19
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...    99   8e-19
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]          97   2e-18

>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/83 (65%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           +TD+YEKVEPHAFVHF  P  VT+A++AA R EL  NG  LKVSLGPE+PF +N+R RT 
Sbjct: 68  KTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTS 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK  +VCV+IGTLVS  EF+V
Sbjct: 128 TPFKLPDVCVEIGTLVSRDEFFV 150


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/83 (65%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           +TD+YEKVEPHAFVHF  P  VT+A++AA R EL  NG  LKVSLGPE+PF +N+R RT 
Sbjct: 68  KTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTS 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK  +VCV+IGTLVS  EF+V
Sbjct: 128 TPFKLPDVCVEIGTLVSRDEFFV 150


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
           gi|462422376|gb|EMJ26639.1| hypothetical protein
           PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RTD+Y +VEPHAFVHFVSP++VT A++AA R EL FN   LKVSLGPE+P+F+N+RRRT 
Sbjct: 67  RTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNRRRRTK 126

Query: 182 NPFKFSNVCVQIGTLVSEHEFW 247
            PFK S+V V+IG+LV + EF+
Sbjct: 127 TPFKLSDVHVEIGSLVRQDEFF 148


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RTD+Y+KVEPHAFVHF SP   T A++AA R ELVFN   LKVSLGPE+P+++N+RRR  
Sbjct: 68  RTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+VC+ IG +VS  EF+V
Sbjct: 128 TPFKLSDVCLDIGGMVSRDEFFV 150


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/83 (65%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RTDNY+KVEPHAFVHF SPE+VT ALNA+   +L      LKVS GPE+P+F+N+RRRT 
Sbjct: 68  RTDNYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPENPYFLNQRRRTT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V+IGTLVS  EF+V
Sbjct: 128 TPFKMSDVLVEIGTLVSPGEFFV 150


>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
           gi|561010117|gb|ESW09024.1| hypothetical protein
           PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = +2

Query: 5   TDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTIN 184
           TD+Y+KVEPHAFVHF SPE+VT ALNA+ R +L      LKVS GPE+P+F+NKRRRT  
Sbjct: 69  TDDYKKVEPHAFVHFASPESVTAALNASGRCDLFLKNEPLKVSCGPENPYFLNKRRRTTI 128

Query: 185 PFKFSNVCVQIGTLVSEHEFWV 250
           PFK S+V V+IGTLVS  EF+V
Sbjct: 129 PFKMSDVIVEIGTLVSPGEFFV 150


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           R DNY+KVEPHAFVHF SP+AVT A++AA R EL FN   LKVSLGPE+P+++N+RRR  
Sbjct: 68  RKDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRRRRDT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK  +V ++IGTL S  EF V
Sbjct: 128 TPFKLPDVSLEIGTLASCDEFIV 150


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/82 (63%), Positives = 66/82 (80%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RT++Y+KVEPHAFVHFVSPEA T AL+AA + EL  +G  LKVSLGPE+PF +N+RRRT 
Sbjct: 68  RTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRTT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFW 247
            PFKF +V ++IG LVS  E++
Sbjct: 128 FPFKFPDVRLEIGILVSRDEYF 149


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RT++Y+KVEPHAFVHF SPE+VT ALNA+   +L      LKVS GP++P+F+N+RRRT 
Sbjct: 68  RTEDYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPKNPYFLNQRRRTT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V+IGTLVS  EF+V
Sbjct: 128 TPFKMSDVLVEIGTLVSPGEFFV 150


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           R D Y +VEPHAFVHF SP++ T A NAA   EL FNG  +KVSLGPE+PF +N+RRRT 
Sbjct: 68  RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V+IGTLVS  EF V
Sbjct: 128 IPFKLSDVHVEIGTLVSRDEFLV 150


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/83 (59%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RTD+Y+KVEPHAFVHF  PE+VT+AL+A+   +L++ G  LKV  GP++P+F+N+RRR  
Sbjct: 68  RTDDYKKVEPHAFVHFALPESVTEALDASGSCDLMWEGKPLKVISGPQNPYFLNQRRRKE 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V+IGTLVS  EF V
Sbjct: 128 TPFKLSDVLVEIGTLVSPEEFVV 150


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/83 (59%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RT++Y +VEPHAFVHF  P++ T A++AA+R EL  N   LK SLGPE+PF +N+RRR  
Sbjct: 68  RTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S V V+IGTLVS  EF+V
Sbjct: 128 TPFKLSGVGVEIGTLVSRDEFFV 150


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/83 (63%), Positives = 60/83 (72%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           R +NY KVEPHAFVHF S E+   AL AA R EL      LKVSLGPE+PF +NKRRRTI
Sbjct: 67  RMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMNKRRRTI 126

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFKFS+V V+IG LVS  +F V
Sbjct: 127 MPFKFSDVGVEIGVLVSNDDFVV 149


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
           gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
           [Medicago truncatula]
          Length = 1188

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = +2

Query: 5   TDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTIN 184
           TD+Y+KV PHAFVHF  P++ T+ALNAA R +L+ NG  LKV  GP++P F+N+RRRT  
Sbjct: 56  TDDYKKVAPHAFVHFTLPDSATEALNAAGRCDLILNGKVLKVISGPQNPNFLNQRRRTEA 115

Query: 185 PFKFSNVCVQIGTLVSEHEFWV 250
           PFK S+V V+IGTLVS  +F V
Sbjct: 116 PFKMSDVIVEIGTLVSPADFTV 137


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/83 (59%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           ++D+Y+KV PHAFVHFVSP++  +AL+AA R EL+FN   LK SLGPESPF +N+RRRT 
Sbjct: 67  KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V IG L     F V
Sbjct: 127 VPFKLSDVQVDIGNLTCHDGFSV 149


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
           gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
           6 [Cucumis sativus]
          Length = 1197

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/83 (59%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           ++D+Y+KV PHAFVHFVSP++  +AL+AA R EL+FN   LK SLGPESPF +N+RRRT 
Sbjct: 67  KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V V IG L     F V
Sbjct: 127 VPFKLSDVQVDIGNLTCHDGFSV 149


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/81 (56%), Positives = 63/81 (77%)
 Frame = +2

Query: 8   DNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTINP 187
           ++Y++VEPHAFVHFVSPE+   A++AA + +L+ +G  LKVSLGPE+P+ +N+RRRT  P
Sbjct: 86  NDYKRVEPHAFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTP 145

Query: 188 FKFSNVCVQIGTLVSEHEFWV 250
            K S + V+IGTLVS  EF V
Sbjct: 146 LKLSGISVEIGTLVSRDEFLV 166


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/81 (56%), Positives = 63/81 (77%)
 Frame = +2

Query: 8   DNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTINP 187
           ++Y++VEPHAFVHFVSPE+   A++AA + +L+ +G  LKVSLGPE+P+ +N+RRRT  P
Sbjct: 70  NDYKRVEPHAFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTP 129

Query: 188 FKFSNVCVQIGTLVSEHEFWV 250
            K S + V+IGTLVS  EF V
Sbjct: 130 LKLSGISVEIGTLVSRDEFLV 150


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/83 (56%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           RT++Y +V PHAFVHF  P++ T A+NA+ R EL  N   LKVSLGP++PF +N+RRRT 
Sbjct: 68  RTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTT 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK S+V  +IG LVS  EF+V
Sbjct: 128 TPFKLSDVGFEIGNLVSRDEFFV 150


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   RTDNYEKVEPHAFVHFVSPEAVTKALNAAERRELVFNGNQLKVSLGPESPFFVNKRRRTI 181
           R+DNY+KVEPHAFVHF  P++ T+A+ A+ R  L F    LK SLGPES F +N+RRRT+
Sbjct: 68  RSDNYKKVEPHAFVHFALPKSATRAMEASGRGGLFFKNQLLKASLGPESSFHMNQRRRTM 127

Query: 182 NPFKFSNVCVQIGTLVSEHEFWV 250
            PFK  +V ++IGTLVS  EF V
Sbjct: 128 IPFKLVDVGLEIGTLVSPGEFIV 150