BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00041809
         (744 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   301   2e-79
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   298   1e-78
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   295   9e-78
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   289   6e-76
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   287   3e-75
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   285   2e-74
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   284   2e-74
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   282   1e-73
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   282   1e-73
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   281   1e-73
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   281   1e-73
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   281   1e-73
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   281   1e-73
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   279   8e-73
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   278   2e-72
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              277   3e-72
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   274   2e-71
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   274   2e-71
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   267   3e-69
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   267   3e-69

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  301 bits (770), Expect = 2e-79
 Identities = 151/250 (60%), Positives = 186/250 (74%), Gaps = 3/250 (1%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSKS---GLKWIKEVLLGKRTDFAFR 172
            ++L+D + + NE    V DCL  SKL +EKS++ DS S   GLKWIKEVLLGKRT+ +FR
Sbjct: 298  KKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFR 357

Query: 173  MTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRKGNL 352
            M VVGDP ++ SEIGIPC            N+ N  K+   CNLRL E+G+ +VRRKG L
Sbjct: 358  MIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTL 417

Query: 353  VCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPVCCS 532
              V   N+ + GD +YR L +GDI+L+NRPPS+HQHS+IALSVK+LP+ SVVS+NP+CCS
Sbjct: 418  APVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCS 477

Query: 533  PFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYLLRE 712
            PFR DFDGDCLHGYIPQSV SRVEL ELV+L  QLIN+Q+GRNLLSL  DSL+A +L+ E
Sbjct: 478  PFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVME 537

Query: 713  KGVFLNRFQM 742
             GV LN FQM
Sbjct: 538  DGVLLNLFQM 547


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  298 bits (764), Expect = 1e-78
 Identities = 147/262 (56%), Positives = 188/262 (71%), Gaps = 15/262 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSK---------------SGLKWIKE 136
            ++L D +   NE   +V +CL ISKLH EK SN +S                SGL+++K+
Sbjct: 267  KKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKD 326

Query: 137  VLLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFE 316
            V+LGKR D  FRM + G+P+++ SEI IPC            N  N  +L ACC+LRL E
Sbjct: 327  VILGKRNDHCFRMVLTGNPNLKLSEISIPCHVAERLQIAEQLNNWNEERLKACCDLRLLE 386

Query: 317  RGEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPV 496
            +GE HVRR+G LV + H+ +L++GD+++R L+ GDI+L+NRPPS+HQHSLIALSVK+LPV
Sbjct: 387  KGEIHVRREGRLVRIRHNEKLQVGDTIFRPLNNGDIILINRPPSIHQHSLIALSVKVLPV 446

Query: 497  GSVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLC 676
             SVVS+NP+ CSPFR DFDGDCLHGY+PQS+ +RVEL ELVSL  QLIN Q+GRNLLSL 
Sbjct: 447  SSVVSINPLICSPFRGDFDGDCLHGYVPQSIKARVELIELVSLNRQLINGQSGRNLLSLS 506

Query: 677  HDSLTAIYLLREKGVFLNRFQM 742
            HDSLTA YL++E GV LN FQM
Sbjct: 507  HDSLTAAYLVKEDGVLLNLFQM 528


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  295 bits (756), Expect = 9e-78
 Identities = 151/253 (59%), Positives = 186/253 (73%), Gaps = 6/253 (2%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISK---LHTEKSSNTDSKS---GLKWIKEVLLGKRTDF 163
            ++L+D + + NE    V DCL  SK   L +EKS++ DS S   GLKWIKEVLLGKRT+ 
Sbjct: 265  KKLVDFRGTANELSCRVLDCLKTSKASNLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNH 324

Query: 164  AFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRK 343
            +FRM VVGDP ++ SEIGIPC            N+ N  K+   CNLRL E+G+ +VRRK
Sbjct: 325  SFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRK 384

Query: 344  GNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPV 523
            G L  V   N+ + GD +YR L +GDI+L+NRPPS+HQHS+IALSVK+LP+ SVVS+NP+
Sbjct: 385  GTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPL 444

Query: 524  CCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYL 703
            CCSPFR DFDGDCLHGYIPQSV SRVEL ELV+L  QLIN+Q+GRNLLSL  DSL+A +L
Sbjct: 445  CCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHL 504

Query: 704  LREKGVFLNRFQM 742
            + E GV LN FQM
Sbjct: 505  VMEDGVLLNLFQM 517


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  289 bits (740), Expect = 6e-76
 Identities = 149/262 (56%), Positives = 189/262 (72%), Gaps = 15/262 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKL--------------HTEKSSNT-DSKSGLKWIKE 136
            ++++D + + NE G  V DCL ISK               + +K  +T  S SGL+WIK+
Sbjct: 265  KKVVDFRGTANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKD 324

Query: 137  VLLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFE 316
            V+LGKR+D  FRM VVGDP+I+ SEIGIPC            ++ NM KL+  C L L E
Sbjct: 325  VVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVE 384

Query: 317  RGEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPV 496
            +GE +VRR+G LV V +  EL +GD++YR L +GDI+LVNRPPS+HQHSLIALSVK+LPV
Sbjct: 385  KGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLIALSVKLLPV 444

Query: 497  GSVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLC 676
             +V+SLNP+CCSPFR DFDGDCLHGY+PQS+ +RVE+RELVSL+ QL N Q+GRNLLSL 
Sbjct: 445  SAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQSGRNLLSLS 504

Query: 677  HDSLTAIYLLREKGVFLNRFQM 742
            HDSLTA +L+ E GV LN FQM
Sbjct: 505  HDSLTAAHLILEDGVSLNLFQM 526


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  287 bits (734), Expect = 3e-75
 Identities = 143/261 (54%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
            ++++D +    E    V DCL  SK++ +KS N D              S SGL+WIK+V
Sbjct: 260  KKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRWIKDV 319

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FRM VVGDP+I+FSEIGIPC             T N  KLN CC +RL E+
Sbjct: 320  VLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNTCCEVRLLEK 379

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ HVRR+G LV V  + EL +GD +YR L++GD +L+NRPPS+HQHSLIALSVK+LP  
Sbjct: 380  GDMHVRREGKLVRVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPAT 439

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SV+++NP+ C+PFR DFDGDCLHGY+PQSV +RVELRELV+L+ QLIN QNGRNLLS   
Sbjct: 440  SVLAINPLICAPFRGDFDGDCLHGYVPQSVDTRVELRELVALDKQLINVQNGRNLLSFSQ 499

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSL A +L+ E GV L+  QM
Sbjct: 500  DSLVAAHLVMEDGVLLSLQQM 520


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  285 bits (728), Expect = 2e-74
 Identities = 142/260 (54%), Positives = 182/260 (70%), Gaps = 13/260 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDS-------------KSGLKWIKEVL 142
            ++++D++    E    V+DCL ISKLH +KSS  DS              SGL+WIK+V+
Sbjct: 258  KKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVV 317

Query: 143  LGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERG 322
            LGKR D  FRM V GDP+I+  EIGIPC            N+ N  +L+ C + RL E+G
Sbjct: 318  LGKRNDDCFRMVVTGDPNIKLKEIGIPCQVAERLQISERLNSWNWERLSVCISFRLLEKG 377

Query: 323  EFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGS 502
            E +V RKG LV +   + LELGD +YR L +GDI+L+NRPPS+H HSLIAL+VK+LP+ S
Sbjct: 378  ELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISS 437

Query: 503  VVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHD 682
            VV++NP+CCSPF  DFDGDCLHGYIPQ++ +RVEL ELV+L+ QLINQQ+GRNLLSL  D
Sbjct: 438  VVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLSLGQD 497

Query: 683  SLTAIYLLREKGVFLNRFQM 742
            SLTA +LL E GV L+  QM
Sbjct: 498  SLTAAHLLMEDGVLLSHLQM 517


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
           gi|462406650|gb|EMJ12114.1| hypothetical protein
           PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  284 bits (727), Expect = 2e-74
 Identities = 144/247 (58%), Positives = 177/247 (71%)
 Frame = +2

Query: 2   RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSKSGLKWIKEVLLGKRTDFAFRMTV 181
           R+L+D K   NE G                S +    SGL+WIK+V+LGKR+D  FR  V
Sbjct: 258 RKLVDFKGVANELG----------------SHDPSKTSGLRWIKDVVLGKRSDHCFRTVV 301

Query: 182 VGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRKGNLVCV 361
           VGDP+I+ SEIGIPC            N  N+ KL+A CNLRL  +GE HVRRKG+LV V
Sbjct: 302 VGDPNIKLSEIGIPCQIAERLQISENLNRWNIEKLDASCNLRLMVKGEMHVRRKGSLVWV 361

Query: 362 YHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPVCCSPFR 541
             ++EL++GD++YR L +GDI+L+NRPPS+HQHSLIALSVKILP+ SVVS+NP+CCSPFR
Sbjct: 362 RQTDELQMGDTIYRPLSDGDIVLINRPPSIHQHSLIALSVKILPITSVVSINPLCCSPFR 421

Query: 542 ADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYLLREKGV 721
            DFDGDCLHGYIPQS  +RVELRELV+L+ QLIN Q+GRNLLSL  DSLTA +L+ E G 
Sbjct: 422 GDFDGDCLHGYIPQSNDARVELRELVALDKQLINGQSGRNLLSLSQDSLTAAHLIMEDGT 481

Query: 722 FLNRFQM 742
            LN  +M
Sbjct: 482 LLNLLEM 488


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  282 bits (721), Expect = 1e-73
 Identities = 141/260 (54%), Positives = 181/260 (69%), Gaps = 13/260 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDS-------------KSGLKWIKEVL 142
            ++++D++    E    V+DCL ISKLH +KSS  DS              SGL+WIK+V+
Sbjct: 258  KKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVV 317

Query: 143  LGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERG 322
            LGKR D  FRM V GDP+I+  EIGIPC            N+ N  +L+ C + RL E+G
Sbjct: 318  LGKRNDDCFRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRLLEKG 377

Query: 323  EFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGS 502
            E +V RKG LV +   + LELGD +YR L +GDI+L+NRPPS+H HSLIAL+VK+LP+ S
Sbjct: 378  ELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISS 437

Query: 503  VVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHD 682
            VV++NP+CCSPF  DFDGDCLHGYIPQ++ +RVEL ELV+L+ QLINQQ+GRNLLSL  D
Sbjct: 438  VVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLSLGQD 497

Query: 683  SLTAIYLLREKGVFLNRFQM 742
            SLTA +LL E  V L+  QM
Sbjct: 498  SLTAAHLLMEDSVLLSHLQM 517


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  282 bits (721), Expect = 1e-73
 Identities = 141/260 (54%), Positives = 181/260 (69%), Gaps = 13/260 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDS-------------KSGLKWIKEVL 142
            ++++D++    E    V+DCL ISKLH +KSS  DS              SGL+WIK+V+
Sbjct: 296  KKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVV 355

Query: 143  LGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERG 322
            LGKR D  FRM V GDP+I+  EIGIPC            N+ N  +L+ C + RL E+G
Sbjct: 356  LGKRNDDCFRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRLLEKG 415

Query: 323  EFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGS 502
            E +V RKG LV +   + LELGD +YR L +GDI+L+NRPPS+H HSLIAL+VK+LP+ S
Sbjct: 416  ELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISS 475

Query: 503  VVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHD 682
            VV++NP+CCSPF  DFDGDCLHGYIPQ++ +RVEL ELV+L+ QLINQQ+GRNLLSL  D
Sbjct: 476  VVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLSLGQD 535

Query: 683  SLTAIYLLREKGVFLNRFQM 742
            SLTA +LL E  V L+  QM
Sbjct: 536  SLTAAHLLMEDSVLLSHLQM 555


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
           [Glycine max]
          Length = 1381

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/261 (52%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2   RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
           ++L+D + + NE    V DCL ISKL+ +K+ N+               + SGL+WIK+V
Sbjct: 173 KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 232

Query: 140 LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
           +LGKR D +FR  VVGDP ++ SEIGIPC            N +N  KL  CC L L E+
Sbjct: 233 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEK 292

Query: 320 GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
           G+ +V RKG++V +Y   +L++GD  YR L +GD +L+NRPPS+HQHS+I+L+V++LP+ 
Sbjct: 293 GKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPIS 352

Query: 500 SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
           SVV +NP+CCSP R DFDGDCLHGYIPQSV +R+EL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 353 SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 412

Query: 680 DSLTAIYLLREKGVFLNRFQM 742
           DSLTA YLL E GV LN +QM
Sbjct: 413 DSLTAAYLLMEDGVLLNVYQM 433


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/261 (52%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
            ++L+D + + NE    V DCL ISKL+ +K+ N+               + SGL+WIK+V
Sbjct: 250  KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FR  VVGDP ++ SEIGIPC            N +N  KL  CC L L E+
Sbjct: 310  VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEK 369

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ +V RKG++V +Y   +L++GD  YR L +GD +L+NRPPS+HQHS+I+L+V++LP+ 
Sbjct: 370  GKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPIS 429

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SVV +NP+CCSP R DFDGDCLHGYIPQSV +R+EL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 430  SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 489

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSLTA YLL E GV LN +QM
Sbjct: 490  DSLTAAYLLMEDGVLLNVYQM 510


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/261 (52%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
            ++L+D + + NE    V DCL ISKL+ +K+ N+               + SGL+WIK+V
Sbjct: 250  KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FR  VVGDP ++ SEIGIPC            N +N  KL  CC L L E+
Sbjct: 310  VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEK 369

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ +V RKG++V +Y   +L++GD  YR L +GD +L+NRPPS+HQHS+I+L+V++LP+ 
Sbjct: 370  GKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPIS 429

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SVV +NP+CCSP R DFDGDCLHGYIPQSV +R+EL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 430  SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 489

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSLTA YLL E GV LN +QM
Sbjct: 490  DSLTAAYLLMEDGVLLNVYQM 510


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/261 (52%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
            ++L+D + + NE    V DCL ISKL+ +K+ N+               + SGL+WIK+V
Sbjct: 250  KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FR  VVGDP ++ SEIGIPC            N +N  KL  CC L L E+
Sbjct: 310  VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEK 369

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ +V RKG++V +Y   +L++GD  YR L +GD +L+NRPPS+HQHS+I+L+V++LP+ 
Sbjct: 370  GKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPIS 429

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SVV +NP+CCSP R DFDGDCLHGYIPQSV +R+EL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 430  SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 489

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSLTA YLL E GV LN +QM
Sbjct: 490  DSLTAAYLLMEDGVLLNVYQM 510


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
           max]
          Length = 1369

 Score =  279 bits (713), Expect = 8e-73
 Identities = 137/261 (52%), Positives = 180/261 (68%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2   RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTD--------------SKSGLKWIKEV 139
           ++L+D + + NE    V DCL ISKL+ +K+ N+               + SGL+WIK+V
Sbjct: 164 KKLVDFRGTPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACNSSGLRWIKDV 223

Query: 140 LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
           +LGKR D + R  VVGDP ++ SE+GIPC            N +N  KL  CC LRL E+
Sbjct: 224 VLGKRNDSSLRTVVVGDPDLELSEVGIPCHIAESLQVSEYVNRQNREKLLYCCELRLLEK 283

Query: 320 GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
           G+  V R G+ V +Y   +L++GD +YR L +GD +L+NRPPS+HQHS+IAL+V++LP+ 
Sbjct: 284 GKIDVCRNGSKVHLYKKEDLQIGDKIYRPLADGDKVLINRPPSIHQHSMIALTVRVLPIS 343

Query: 500 SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
           SVV +NP+CCSP R DFDGDCLHGYIPQSV +R+EL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 344 SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 403

Query: 680 DSLTAIYLLREKGVFLNRFQM 742
           DSLTA YLL E GV LN +QM
Sbjct: 404 DSLTAAYLLMEDGVLLNVYQM 424


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  278 bits (710), Expect = 2e-72
 Identities = 141/262 (53%), Positives = 179/262 (68%), Gaps = 15/262 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSS-------------NTDSKSGLKWIKEVL 142
            R+L+D + + NE G  V DCL ISK++ EK+              +    SGL+WIK+V+
Sbjct: 244  RKLVDFRGTANELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWIKDVV 303

Query: 143  LGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFE-- 316
            LGKR+D  FRM VVGDP+I+ SEIGIP             N  N  KL   C LRL    
Sbjct: 304  LGKRSDHCFRMVVVGDPNIKLSEIGIPRHIAEKMQISENLNQYNFEKLFVFCQLRLGPDG 363

Query: 317  RGEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPV 496
            RG+ HVRR  +LV +    ELE+GD +YR L  GD++L+NRPPS+HQHSLIAL+ K+LPV
Sbjct: 364  RGDIHVRRNDSLVRIRKPEELEMGDIIYRALSNGDVVLINRPPSIHQHSLIALTTKVLPV 423

Query: 497  GSVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLC 676
             SVVS+NP+CCSPF+ DFDGDCLHGY+PQSV +RVEL ELV+L+ QL+N Q+G NL+SL 
Sbjct: 424  NSVVSINPLCCSPFQGDFDGDCLHGYVPQSVETRVELTELVALDKQLVNGQSGTNLMSLS 483

Query: 677  HDSLTAIYLLREKGVFLNRFQM 742
             DSLTA YL+ E G  +N+FQM
Sbjct: 484  QDSLTAFYLITEDGTLMNKFQM 505


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  277 bits (708), Expect = 3e-72
 Identities = 142/247 (57%), Positives = 176/247 (71%)
 Frame = +2

Query: 2   RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSKSGLKWIKEVLLGKRTDFAFRMTV 181
           ++L+D + + NE       C + SK+           SGLKWIKEVLLGKRT+ +FRM V
Sbjct: 260 KKLVDFRGTANELS-----CHSASKM-----------SGLKWIKEVLLGKRTNHSFRMIV 303

Query: 182 VGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRKGNLVCV 361
           VGDP ++ SEIGIPC            N+ N  K+   CNLRL E+G+ +VRRKG L  V
Sbjct: 304 VGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPV 363

Query: 362 YHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPVCCSPFR 541
              N+ + GD +YR L +GDI+L+NRPPS+HQHS+IALSVK+LP+ SVVS+NP+CCSPFR
Sbjct: 364 RRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFR 423

Query: 542 ADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYLLREKGV 721
            DFDGDCLHGYIPQSV SRVEL ELV+L  QLIN+Q+GRNLLSL  DSL+A +L+ E GV
Sbjct: 424 GDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGV 483

Query: 722 FLNRFQM 742
            LN FQM
Sbjct: 484 LLNLFQM 490


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  274 bits (701), Expect = 2e-71
 Identities = 134/261 (51%), Positives = 179/261 (68%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKS--------------SNTDSKSGLKWIKEV 139
            ++L+D + + NE    V DCL  SK++ +K+               N  + SGL+W+K++
Sbjct: 261  KKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDI 320

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FR  VVGDP ++ SEIG+PC            N +N   L  CC LRL E+
Sbjct: 321  VLGKRNDSSFRTVVVGDPDLELSEIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELRLLEK 380

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ +V RKG  V ++   ++++GD  YR L +GD +L+NRPPS+HQHS+IAL+V++LP+ 
Sbjct: 381  GQINVCRKGRPVVLFKKEDVQIGDIFYRPLVDGDRVLINRPPSIHQHSMIALTVRVLPIS 440

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SVVS+NP+CCSP R DFDGDCLHGYIPQSV +RVEL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 441  SVVSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQ 500

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSLTA YLL E GV LN +QM
Sbjct: 501  DSLTAAYLLLEDGVLLNVYQM 521


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  274 bits (701), Expect = 2e-71
 Identities = 134/261 (51%), Positives = 179/261 (68%), Gaps = 14/261 (5%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKS--------------SNTDSKSGLKWIKEV 139
            ++L+D + + NE    V DCL  SK++ +K+               N  + SGL+W+K++
Sbjct: 261  KKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDI 320

Query: 140  LLGKRTDFAFRMTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFER 319
            +LGKR D +FR  VVGDP ++ SEIG+PC            N +N   L  CC LRL E+
Sbjct: 321  VLGKRNDSSFRTVVVGDPDLELSEIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELRLLEK 380

Query: 320  GEFHVRRKGNLVCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVG 499
            G+ +V RKG  V ++   ++++GD  YR L +GD +L+NRPPS+HQHS+IAL+V++LP+ 
Sbjct: 381  GQINVCRKGRPVVLFKKEDVQIGDIFYRPLVDGDRVLINRPPSIHQHSMIALTVRVLPIS 440

Query: 500  SVVSLNPVCCSPFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCH 679
            SVVS+NP+CCSP R DFDGDCLHGYIPQSV +RVEL ELV+L+ QLIN Q+GRNLLSL  
Sbjct: 441  SVVSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQ 500

Query: 680  DSLTAIYLLREKGVFLNRFQM 742
            DSLTA YLL E GV LN +QM
Sbjct: 501  DSLTAAYLLLEDGVLLNVYQM 521


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Solanum tuberosum]
          Length = 1233

 Score =  267 bits (682), Expect = 3e-69
 Identities = 130/250 (52%), Positives = 181/250 (72%), Gaps = 3/250 (1%)
 Frame = +2

Query: 2   RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSKS---GLKWIKEVLLGKRTDFAFR 172
           R+L+D + + N+  + V D + +SK+  ++S   D  +   GLK++KE++L KRT+ AFR
Sbjct: 38  RKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNHAFR 97

Query: 173 MTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRKGNL 352
           M VVGDP+I+  EIGIPC            + RN  ++   C+L + +RG   VRR G L
Sbjct: 98  MVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVL 157

Query: 353 VCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPVCCS 532
           V +   + L+ GD ++R L +GD++++NRPPS+HQHSLIALSV+ILP+ SV+S+NP+ CS
Sbjct: 158 VRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCS 217

Query: 533 PFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYLLRE 712
           PFR DFDGDCLHGYIPQS+ SR+EL ELV+L+ QL++ QNG+NLLSL HDSLTA +L+ E
Sbjct: 218 PFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILE 277

Query: 713 KGVFLNRFQM 742
            GVFL+RFQM
Sbjct: 278 PGVFLDRFQM 287


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  267 bits (682), Expect = 3e-69
 Identities = 130/250 (52%), Positives = 181/250 (72%), Gaps = 3/250 (1%)
 Frame = +2

Query: 2    RRLLDHKTSTNEFGLYVRDCLNISKLHTEKSSNTDSKS---GLKWIKEVLLGKRTDFAFR 172
            R+L+D + + N+  + V D + +SK+  ++S   D  +   GLK++KE++L KRT+ AFR
Sbjct: 251  RKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNHAFR 310

Query: 173  MTVVGDPSIQFSEIGIPCDXXXXXXXXXXXNTRNMVKLNACCNLRLFERGEFHVRRKGNL 352
            M VVGDP+I+  EIGIPC            + RN  ++   C+L + +RG   VRR G L
Sbjct: 311  MVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVL 370

Query: 353  VCVYHSNELELGDSVYRHLDEGDILLVNRPPSVHQHSLIALSVKILPVGSVVSLNPVCCS 532
            V +   + L+ GD ++R L +GD++++NRPPS+HQHSLIALSV+ILP+ SV+S+NP+ CS
Sbjct: 371  VRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCS 430

Query: 533  PFRADFDGDCLHGYIPQSVISRVELRELVSLENQLINQQNGRNLLSLCHDSLTAIYLLRE 712
            PFR DFDGDCLHGYIPQS+ SR+EL ELV+L+ QL++ QNG+NLLSL HDSLTA +L+ E
Sbjct: 431  PFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILE 490

Query: 713  KGVFLNRFQM 742
             GVFL+RFQM
Sbjct: 491  PGVFLDRFQM 500