BLASTX nr result

ID: Sinomenium21_contig00041773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00041773
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC16208.1| hypothetical protein L484_024379 [Morus notabilis]      69   7e-10
dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polypro...    64   2e-08
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    64   2e-08
ref|XP_004295592.1| PREDICTED: uncharacterized protein LOC101291...    61   2e-07
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    59   7e-07
ref|XP_007206637.1| hypothetical protein PRUPE_ppa021001mg [Prun...    58   2e-06
ref|XP_007199279.1| hypothetical protein PRUPE_ppa022873mg [Prun...    56   5e-06

>gb|EXC16208.1| hypothetical protein L484_024379 [Morus notabilis]
          Length = 402

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -2

Query: 252 PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSF 94
           PF IS +++DNAYVV LP +  ISSTFNV+D Y Y+PPD A++ +EN   SSF
Sbjct: 345 PFHISHKVSDNAYVVGLPDDWEISSTFNVADLYTYFPPDDASMHLENSGSSSF 397


>dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 127

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = -2

Query: 264 PRKC-PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSM 88
           PRK  PF++ ++INDNAYVV LP  M+IS+TFNV+D +EY+  D      ENLR SS  +
Sbjct: 61  PRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYH-ADGVLYPEENLRTSSSEV 119

Query: 87  EE 82
           EE
Sbjct: 120 EE 121


>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = -2

Query: 264 PRKC-PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSM 88
           PRK  PF++ ++INDNAYVV LP  M+IS+TFNV+D +EY+  D      ENLR SS  +
Sbjct: 214 PRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYH-ADGVLYPEENLRTSSSEV 272

Query: 87  EE 82
           EE
Sbjct: 273 EE 274


>ref|XP_004295592.1| PREDICTED: uncharacterized protein LOC101291324 [Fragaria vesca
            subsp. vesca]
          Length = 2122

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = -2

Query: 252  PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSMEE 82
            PF++ ++INDNAYVV LP  + IS+TFNV+D YEY+  D A  +IEN   SS  +EE
Sbjct: 1415 PFKVLRKINDNAYVVALPAFISISNTFNVADIYEYH-ADEALYSIENSGSSSSEVEE 1470


>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = -2

Query: 252 PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSME 85
           PFR+ ++I DNAY +DL  +++IS+TFNV D +EY+P D  ++  +NLR S   +E
Sbjct: 802 PFRVLQKIGDNAYKIDLLADINISNTFNVVDVFEYFPSDEFSLQPQNLRMSFLQVE 857


>ref|XP_007206637.1| hypothetical protein PRUPE_ppa021001mg [Prunus persica]
           gi|462402279|gb|EMJ07836.1| hypothetical protein
           PRUPE_ppa021001mg [Prunus persica]
          Length = 590

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -2

Query: 264 PRKC-PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSM 88
           PRK  P++I K+INDNAYVVDL P M ISSTFNV+D Y +   D      +N   +SF +
Sbjct: 491 PRKYGPYKILKKINDNAYVVDLSPSMEISSTFNVADLYAFNKDD-MLYPEDNSGSNSFEV 549

Query: 87  E 85
           E
Sbjct: 550 E 550


>ref|XP_007199279.1| hypothetical protein PRUPE_ppa022873mg [Prunus persica]
           gi|462394679|gb|EMJ00478.1| hypothetical protein
           PRUPE_ppa022873mg [Prunus persica]
          Length = 777

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = -2

Query: 252 PFRISKRINDNAYVVDLPPEMHISSTFNVSDFYEYYPPDAATVAIENLRPSSFSME 85
           P +I K+INDNAYVVDLP  M ISS+FNV+D Y ++  D   +  +N R SS  +E
Sbjct: 675 PSKILKKINDNAYVVDLPHSMEISSSFNVADLYAFHEDDLLYLE-DNSRSSSSKVE 729


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