BLASTX nr result
ID: Sinomenium21_contig00041487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00041487
(362 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat... 132 5e-29
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat... 129 6e-28
emb|CBI38188.3| unnamed protein product [Vitis vinifera] 129 6e-28
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera] 129 6e-28
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 127 1e-27
ref|XP_007226729.1| hypothetical protein PRUPE_ppa019364mg, part... 125 5e-27
ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat... 125 8e-27
ref|XP_007043839.1| Tetratricopeptide repeat-like superfamily pr... 124 2e-26
ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat... 123 3e-26
ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat... 122 5e-26
ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat... 122 7e-26
ref|XP_007153123.1| hypothetical protein PHAVU_003G008700g [Phas... 121 9e-26
ref|XP_002304652.2| pentatricopeptide repeat-containing family p... 121 9e-26
gb|EYU33762.1| hypothetical protein MIMGU_mgv1a027082mg [Mimulus... 120 2e-25
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ... 119 3e-25
gb|AHB18406.1| pentatricopeptide repeat-containing protein [Goss... 118 7e-25
ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citr... 117 2e-24
ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat... 117 2e-24
gb|AFW76825.1| putative pentatricopeptide repeat family protein ... 115 5e-24
>ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 733
Score = 132 bits (332), Expect = 5e-29
Identities = 62/83 (74%), Positives = 66/83 (79%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVEDDEK+RLLWVHSERLAL+ IKNLRIC DCHA +K ISKVVQRE
Sbjct: 651 LDVEDDEKERLLWVHSERLALAFALVRTPSGSLIRIIKNLRICVDCHATVKLISKVVQRE 710
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
IIVRDMNRFHHF+DGICSCGDYW
Sbjct: 711 IIVRDMNRFHHFQDGICSCGDYW 733
>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 129 bits (323), Expect = 6e-28
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVED+EK+RLLWVHSERLALS +KNLRIC DCHAAIK ISKVVQRE
Sbjct: 529 LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 588
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I+VRD+NRFHHF++G+CSCGDYW
Sbjct: 589 IVVRDINRFHHFQEGLCSCGDYW 611
>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 129 bits (323), Expect = 6e-28
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVED+EK+RLLWVHSERLALS +KNLRIC DCHAAIK ISKVVQRE
Sbjct: 662 LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 721
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I+VRD+NRFHHF++G+CSCGDYW
Sbjct: 722 IVVRDINRFHHFQEGLCSCGDYW 744
>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 129 bits (323), Expect = 6e-28
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVED+EK+RLLWVHSERLALS +KNLRIC DCHAAIK ISKVVQRE
Sbjct: 705 LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 764
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I+VRD+NRFHHF++G+CSCGDYW
Sbjct: 765 IVVRDINRFHHFQEGLCSCGDYW 787
>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 716
Score = 127 bits (320), Expect = 1e-27
Identities = 58/82 (70%), Positives = 65/82 (79%)
Frame = -3
Query: 357 DVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQREI 178
DVEDDEK R LWVHSERLAL+ +KNLRICTDCH+AIK ISK+VQR+I
Sbjct: 635 DVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDI 694
Query: 177 IVRDMNRFHHFEDGICSCGDYW 112
I+RDMNRFHHF+DGICSCGDYW
Sbjct: 695 IIRDMNRFHHFQDGICSCGDYW 716
>ref|XP_007226729.1| hypothetical protein PRUPE_ppa019364mg, partial [Prunus persica]
gi|462423665|gb|EMJ27928.1| hypothetical protein
PRUPE_ppa019364mg, partial [Prunus persica]
Length = 824
Score = 125 bits (315), Expect = 5e-27
Identities = 57/83 (68%), Positives = 65/83 (78%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVEDDEK+R LWVHSERLAL+ IKNLRIC DCHA +K ISKVVQR+
Sbjct: 742 LDVEDDEKERFLWVHSERLALAFGLIRTSPGSPIRIIKNLRICVDCHATVKLISKVVQRD 801
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I+VRD+NRFHHF++GICSCGDYW
Sbjct: 802 IVVRDINRFHHFQNGICSCGDYW 824
>ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 822
Score = 125 bits (313), Expect = 8e-27
Identities = 55/83 (66%), Positives = 64/83 (77%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVEDDEK+RLLW+HSERLAL+ IKNLRIC DCHA IK +SK+VQRE
Sbjct: 740 LDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQRE 799
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF G+CSCGDYW
Sbjct: 800 IVIRDINRFHHFRQGVCSCGDYW 822
>ref|XP_007043839.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508707774|gb|EOX99670.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 833
Score = 124 bits (310), Expect = 2e-26
Identities = 57/83 (68%), Positives = 64/83 (77%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVED EK+ LLWVHSERLAL+ IKNLRIC DCHAA+K ISK+VQR
Sbjct: 751 LDVEDKEKEHLLWVHSERLALAFAMFRTPSGSQIRIIKNLRICVDCHAAMKLISKIVQRN 810
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
II+RDMNRFHHF++GICSCGDYW
Sbjct: 811 IIIRDMNRFHHFQNGICSCGDYW 833
>ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cicer arietinum]
Length = 813
Score = 123 bits (308), Expect = 3e-26
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDV+DDEK+R LWVHSERLAL+ IKNLRIC DCHA IK ISKVVQRE
Sbjct: 731 LDVQDDEKERRLWVHSERLALAYGLIRTPVACSIRIIKNLRICVDCHAVIKLISKVVQRE 790
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF G+CSCGDYW
Sbjct: 791 IVIRDINRFHHFRHGVCSCGDYW 813
>ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum tuberosum]
Length = 830
Score = 122 bits (306), Expect = 5e-26
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDV+DDEK RLLW+HSERLAL+ IKNLRIC DCHAAIKFIS +VQRE
Sbjct: 748 LDVDDDEKIRLLWLHSERLALAFALLRTPPGSPIRIIKNLRICLDCHAAIKFISTLVQRE 807
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF++G CSCGDYW
Sbjct: 808 IVIRDINRFHHFQNGACSCGDYW 830
>ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum lycopersicum]
Length = 829
Score = 122 bits (305), Expect = 7e-26
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDV+DDEK RLLW+HSERLAL+ IKNLRIC DCHAAIKFIS +VQRE
Sbjct: 747 LDVDDDEKIRLLWLHSERLALAFALVRMPPGSPIRIIKNLRICLDCHAAIKFISTLVQRE 806
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF+ G CSCGDYW
Sbjct: 807 IVIRDINRFHHFQSGACSCGDYW 829
>ref|XP_007153123.1| hypothetical protein PHAVU_003G008700g [Phaseolus vulgaris]
gi|561026477|gb|ESW25117.1| hypothetical protein
PHAVU_003G008700g [Phaseolus vulgaris]
Length = 806
Score = 121 bits (304), Expect = 9e-26
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
L+VEDDEK LLW HSERLAL+ IKNLRIC DCH IKFISK+VQRE
Sbjct: 724 LNVEDDEKQSLLWAHSERLALAFGLIHTPPASSIRIIKNLRICVDCHTVIKFISKIVQRE 783
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF+ GICSCGDYW
Sbjct: 784 IVIRDINRFHHFQHGICSCGDYW 806
>ref|XP_002304652.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550343311|gb|EEE79631.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 820
Score = 121 bits (304), Expect = 9e-26
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVED +K++ LWVHSERLAL+ IKNLRIC DCHAAIK ISK+VQR+
Sbjct: 738 LDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRD 797
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
II+RDMNRFHHF +GICSCGDYW
Sbjct: 798 IIIRDMNRFHHFHEGICSCGDYW 820
>gb|EYU33762.1| hypothetical protein MIMGU_mgv1a027082mg [Mimulus guttatus]
Length = 791
Score = 120 bits (302), Expect = 2e-25
Identities = 54/83 (65%), Positives = 63/83 (75%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVEDDEK RLLW+HSER+AL+ IKNLRIC DCH AIKF+S +V+RE
Sbjct: 709 LDVEDDEKARLLWLHSERIALAFALLRTPPGSPIRIIKNLRICADCHVAIKFVSTLVRRE 768
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I+VRD+NRFHHF DG+CSC DYW
Sbjct: 769 IVVRDINRFHHFNDGVCSCNDYW 791
>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g13230,
mitochondrial-like [Cucumis sativus]
Length = 721
Score = 120 bits (302), Expect = 2e-25
Identities = 56/83 (67%), Positives = 63/83 (75%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDVEDDEK+RLLW+HSERLAL+ IKNLRIC DCH+ IK ISK+V R+
Sbjct: 639 LDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRD 698
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
IIVRDMNRFHHFE+G CSC DYW
Sbjct: 699 IIVRDMNRFHHFENGSCSCADYW 721
>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 811
Score = 119 bits (299), Expect = 3e-25
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDV+DDEK+R LWVHSERLAL+ IKNLRIC DCH +K ISKVVQRE
Sbjct: 729 LDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQRE 788
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
I++RD+NRFHHF G+CSCGDYW
Sbjct: 789 IVIRDINRFHHFRHGVCSCGDYW 811
>gb|AHB18406.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 775
Score = 118 bits (296), Expect = 7e-25
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -3
Query: 360 LDVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQRE 181
LDV+ EK+ LLWVHSERLAL+ IKNLRIC DCHAA+K ISK+VQR+
Sbjct: 693 LDVDTKEKEHLLWVHSERLALAFALFRTSSGSQIRIIKNLRICVDCHAAMKLISKIVQRD 752
Query: 180 IIVRDMNRFHHFEDGICSCGDYW 112
II+RDMNRFH F DGICSCGDYW
Sbjct: 753 IIIRDMNRFHDFHDGICSCGDYW 775
>ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citrus clementina]
gi|557541042|gb|ESR52086.1| hypothetical protein
CICLE_v10033965mg [Citrus clementina]
Length = 832
Score = 117 bits (293), Expect = 2e-24
Identities = 52/82 (63%), Positives = 63/82 (76%)
Frame = -3
Query: 357 DVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQREI 178
DV++DEK+R LWVHSE+LAL+ IKNLRIC DCH AIK ISK+VQREI
Sbjct: 751 DVKEDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 810
Query: 177 IVRDMNRFHHFEDGICSCGDYW 112
I+RD++RFHHF+DG CSCGD+W
Sbjct: 811 IIRDVHRFHHFQDGCCSCGDFW 832
>ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like isoform X1 [Citrus
sinensis] gi|568858974|ref|XP_006483018.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like isoform X2 [Citrus
sinensis]
Length = 832
Score = 117 bits (292), Expect = 2e-24
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = -3
Query: 357 DVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQREI 178
DV +DEK+R LWVHSE+LAL+ IKNLRIC DCH AIK ISK+VQREI
Sbjct: 751 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 810
Query: 177 IVRDMNRFHHFEDGICSCGDYW 112
I+RD++RFHHF+DG CSCGD+W
Sbjct: 811 IIRDVHRFHHFQDGCCSCGDFW 832
>gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 115 bits (289), Expect = 5e-24
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = -3
Query: 357 DVEDDEKDRLLWVHSERLALSXXXXXXXXXXXXXXIKNLRICTDCHAAIKFISKVVQREI 178
DV+++EK R+LWVHSERLAL+ +KNLR C DCH K ISK+VQREI
Sbjct: 742 DVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREI 801
Query: 177 IVRDMNRFHHFEDGICSCGDYW 112
IVRD+NRFHHFE+GICSCGDYW
Sbjct: 802 IVRDINRFHHFEEGICSCGDYW 823