BLASTX nr result

ID: Sinomenium21_contig00040995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040995
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB66202.1| Serine/threonine-protein kinase Nek5 [Morus notab...    62   8e-08
ref|XP_006378991.1| hypothetical protein POPTR_0009s02520g [Popu...    60   3e-07

>gb|EXB66202.1| Serine/threonine-protein kinase Nek5 [Morus notabilis]
          Length = 965

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/85 (42%), Positives = 50/85 (58%)
 Frame = +2

Query: 29  ESHGCDWRSVSCSTEASEANVDLQKSNISNDEMSSSQPTDLLFTSCEQEYVCKDDIPVSR 208
           E+HGCD +SV CS E SE  V+ Q ++  +  +SS+   DL     E+   CKDD  VSR
Sbjct: 648 ENHGCDHKSVVCSVETSEV-VETQSTSAESKLVSSNIALDLPELCPEERDNCKDDTHVSR 706

Query: 209 PVSRHHLVPQSSATFTLSGDNKLSM 283
           P SR   + QS+ T   SGD+K ++
Sbjct: 707 PSSRPDTMSQSNLTSVSSGDDKFTV 731


>ref|XP_006378991.1| hypothetical protein POPTR_0009s02520g [Populus trichocarpa]
            gi|550330886|gb|ERP56788.1| hypothetical protein
            POPTR_0009s02520g [Populus trichocarpa]
          Length = 967

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
 Frame = +2

Query: 17   NLSTESH---GCDWRSVSCSTEASEANVDLQKSNISNDEMSSSQPTDLLFTSCEQEYVCK 187
            NLS E+    GC  +S+ CS E S+   DL K  + +     S   +L+ +S E+ ++CK
Sbjct: 643  NLSWENSACAGCAHKSILCSEETSDVVTDLHKKTVGDGREGVSSALNLIVSSFEERFICK 702

Query: 188  D-DIPVSRPVSRHHLVPQSSATFTLSGDNKLSMPCSRPDVTXXXXXXXXXXGDDKFNLGE 364
            D +  +SRP +   +VPQS+   + SG                        GDDKF + E
Sbjct: 703  DTNTQLSRPSTGPDMVPQSNL-ISASG------------------------GDDKFTVRE 737

Query: 365  LASSIGD-----XXXXXXXXKNLQPEKGPILQS 448
            L S + +             KNLQ EK  ILQ+
Sbjct: 738  LLSPVSETTPSITSPMSTSQKNLQSEKAAILQN 770


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