BLASTX nr result

ID: Sinomenium21_contig00040889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040889
         (474 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267616.1| PREDICTED: two-component response regulator ...    80   4e-13
ref|XP_007044951.1| Two-component sensor histidine kinase bacter...    66   6e-09
ref|XP_007044949.1| Two-component sensor histidine kinase bacter...    66   6e-09
ref|XP_007044950.1| Two-component sensor histidine kinase bacter...    58   2e-06

>ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
           gi|297738324|emb|CBI27525.3| unnamed protein product
           [Vitis vinifera]
          Length = 594

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
 Frame = -3

Query: 457 LPVPEARNALTSNLIENRKRSNSSQIDFTGCVGSLGLDVNCDSFDSTRSRKHQWSIE-IA 281
           LP  E +  LT    + +K + SSQ+ F    GS+  DVN  +FDS+ S ++ WS E + 
Sbjct: 330 LPRTEQKKMLTGEASDPQK-ARSSQMGFNDSFGSIEQDVNYAAFDSSISAQYSWSGEKVP 388

Query: 280 DIQFKQQTEMEHELYVH-TXXXXXXXXXHIQPDCLQPA-PSIDPGALIKEKDKANSPGSE 107
           + QF+++     +L              HIQ DCLQP  P I PG+  KE+DKA+    +
Sbjct: 389 EAQFQEEHRPSVQLETSFNQLPVPGPQHHIQVDCLQPTLPPISPGSSRKERDKASPAKIK 448

Query: 106 PLCSGYRSNHVTNITAMGSTTGSFPMQA 23
           PL + Y S+HV+N+++ GS    F +Q+
Sbjct: 449 PLYASYDSHHVSNVSSAGSEIDLFSVQS 476


>ref|XP_007044951.1| Two-component sensor histidine kinase bacteria, putative isoform 3
           [Theobroma cacao] gi|508708886|gb|EOY00783.1|
           Two-component sensor histidine kinase bacteria, putative
           isoform 3 [Theobroma cacao]
          Length = 517

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 46/131 (35%), Positives = 68/131 (51%)
 Frame = -3

Query: 454 PVPEARNALTSNLIENRKRSNSSQIDFTGCVGSLGLDVNCDSFDSTRSRKHQWSIEIADI 275
           PV E + AL+ ++ +  K + SSQI F   +GS+   +    F+ST   ++ WS EI +I
Sbjct: 266 PVAEPKGALSIDIPDPHK-AQSSQISFDHSLGSVDSGLKFALFNSTNQTRYSWS-EIPEI 323

Query: 274 QFKQQTEMEHELYVHTXXXXXXXXXHIQPDCLQPAPSIDPGALIKEKDKANSPGSEPLCS 95
           QFKQ+ E        +          +Q + LQPA SI  G  I EK+ +    S PL  
Sbjct: 324 QFKQECEPLQLENGFSQLPLPGSQHQVQTEYLQPAASISSGPSITEKEVS----SRPLYD 379

Query: 94  GYRSNHVTNIT 62
            YRSNHV +++
Sbjct: 380 EYRSNHVKHLS 390


>ref|XP_007044949.1| Two-component sensor histidine kinase bacteria, putative isoform 1
           [Theobroma cacao] gi|508708884|gb|EOY00781.1|
           Two-component sensor histidine kinase bacteria, putative
           isoform 1 [Theobroma cacao]
          Length = 581

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 46/131 (35%), Positives = 68/131 (51%)
 Frame = -3

Query: 454 PVPEARNALTSNLIENRKRSNSSQIDFTGCVGSLGLDVNCDSFDSTRSRKHQWSIEIADI 275
           PV E + AL+ ++ +  K + SSQI F   +GS+   +    F+ST   ++ WS EI +I
Sbjct: 330 PVAEPKGALSIDIPDPHK-AQSSQISFDHSLGSVDSGLKFALFNSTNQTRYSWS-EIPEI 387

Query: 274 QFKQQTEMEHELYVHTXXXXXXXXXHIQPDCLQPAPSIDPGALIKEKDKANSPGSEPLCS 95
           QFKQ+ E        +          +Q + LQPA SI  G  I EK+ +    S PL  
Sbjct: 388 QFKQECEPLQLENGFSQLPLPGSQHQVQTEYLQPAASISSGPSITEKEVS----SRPLYD 443

Query: 94  GYRSNHVTNIT 62
            YRSNHV +++
Sbjct: 444 EYRSNHVKHLS 454


>ref|XP_007044950.1| Two-component sensor histidine kinase bacteria, putative isoform 2
           [Theobroma cacao] gi|508708885|gb|EOY00782.1|
           Two-component sensor histidine kinase bacteria, putative
           isoform 2 [Theobroma cacao]
          Length = 440

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/112 (34%), Positives = 58/112 (51%)
 Frame = -3

Query: 454 PVPEARNALTSNLIENRKRSNSSQIDFTGCVGSLGLDVNCDSFDSTRSRKHQWSIEIADI 275
           PV E + AL+ ++ +  K + SSQI F   +GS+   +    F+ST   ++ WS EI +I
Sbjct: 330 PVAEPKGALSIDIPDPHK-AQSSQISFDHSLGSVDSGLKFALFNSTNQTRYSWS-EIPEI 387

Query: 274 QFKQQTEMEHELYVHTXXXXXXXXXHIQPDCLQPAPSIDPGALIKEKDKANS 119
           QFKQ+ E        +          +Q + LQPA SI  G  I EK+K N+
Sbjct: 388 QFKQECEPLQLENGFSQLPLPGSQHQVQTEYLQPAASISSGPSITEKEKPNA 439


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