BLASTX nr result

ID: Sinomenium21_contig00040826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040826
         (336 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   168   6e-40
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   166   2e-39
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   165   5e-39
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   164   9e-39
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   163   3e-38
ref|XP_004489152.1| PREDICTED: genome polyprotein-like [Cicer ar...   161   8e-38
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         155   6e-36
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         155   6e-36
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   155   6e-36
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar...   152   4e-35
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   145   4e-33
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...   144   1e-32
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part...   143   3e-32
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   142   5e-32
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   141   1e-31
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...   140   1e-31
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar...   140   1e-31
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            140   1e-31
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   140   1e-31
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   140   1e-31

>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  168 bits (426), Expect = 6e-40
 Identities = 79/108 (73%), Positives = 93/108 (86%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK+A IFSKF +K+ FWQLG+ P+DR+KTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT 
Sbjct: 829  LKDAQIFSKFDMKSGFWQLGVDPKDRHKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTK 888

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKK 8
            I++ ILDS LIYIDD+LLFSK E+ H QLL +FF I  ++GIMLSEKK
Sbjct: 889  IFEPILDSILIYIDDVLLFSKDEKTHKQLLGQFFQIAHDHGIMLSEKK 936


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  166 bits (421), Expect = 2e-39
 Identities = 78/109 (71%), Positives = 92/109 (84%)
 Frame = -3

Query: 331 LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
           LK+A ++SKF +K+ FWQLGI P DRYKTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT 
Sbjct: 634 LKDAQVYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTR 693

Query: 151 IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
           I++ I+DS LIYIDD+LLFSK E+ H QLL +F  I + +GIMLSEKKS
Sbjct: 694 IFEPIIDSILIYIDDVLLFSKDEKAHKQLLGQFVQIAQNHGIMLSEKKS 742


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  165 bits (418), Expect = 5e-39
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = -3

Query: 331 LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
           LK+A I+SKF +K+ FWQLGI P DRYKTAFCIPNAQYQWTV+ FGLKVAPSLFQK MT 
Sbjct: 500 LKDAQIYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLSFGLKVAPSLFQKAMTR 559

Query: 151 IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
           I++ I+DS LIYIDD+LLFSK E+ H QLL +F  I +E+GIMLSEKKS
Sbjct: 560 IFEPIIDSILIYIDDVLLFSKDEKAHKQLLGQFSQIAQEHGIMLSEKKS 608


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  164 bits (416), Expect = 9e-39
 Identities = 77/109 (70%), Positives = 91/109 (83%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK+A ++S F +K+ FWQLGI P DRYKTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT 
Sbjct: 1424 LKDAQVYSNFDMKSGFWQLGINPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTR 1483

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
            I++ I+DS LIYIDD+LLFSK E+ H QLL +F  I + +GIMLSEKKS
Sbjct: 1484 IFEPIIDSILIYIDDVLLFSKDEKAHKQLLGQFVQIAQNHGIMLSEKKS 1532


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  163 bits (412), Expect = 3e-38
 Identities = 77/109 (70%), Positives = 92/109 (84%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK+A I+SKF +K+ FWQLGI P+DRYK AFCIPNAQYQW V+PFGLKVAPSLFQK MT 
Sbjct: 1369 LKDAQIYSKFDIKSGFWQLGIDPKDRYKMAFCIPNAQYQWIVLPFGLKVAPSLFQKAMTR 1428

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
            I++ I+DS LIYIDD+LLFSK E+ H QLL +F  I +++GIMLSEKKS
Sbjct: 1429 IFEPIIDSILIYIDDVLLFSKDEKAHKQLLGQFSQIAQDHGIMLSEKKS 1477


>ref|XP_004489152.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 143

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/108 (70%), Positives = 92/108 (85%)
 Frame = -3

Query: 328 KEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTNI 149
           K+A I+SKF +K+ F QLG+ P+DRYKTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT I
Sbjct: 36  KDAQIYSKFDMKSGFCQLGVDPKDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRI 95

Query: 148 YKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
           ++ I+DS LIYIDD+LLFSK E+ H QLL + F I +++GIMLSEKKS
Sbjct: 96  FEPIIDSILIYIDDVLLFSKDEKAHKQLLGQIFQIAQDHGIMLSEKKS 143


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  155 bits (392), Expect = 6e-36
 Identities = 72/109 (66%), Positives = 87/109 (79%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK A IFSKF LK+ FWQLGI+P +RYKTAFCIPNA +QWTV+PFGLK APS+FQK M  
Sbjct: 1312 LKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIK 1371

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
            I++ +L + LIYIDDILLFS +  DH +LL +F+DI   +GIMLS KKS
Sbjct: 1372 IFQPLLSNALIYIDDILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKS 1420


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  155 bits (392), Expect = 6e-36
 Identities = 72/109 (66%), Positives = 87/109 (79%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK A IFSKF LK+ FWQLGI+P +RYKTAFCIPNA +QWTV+PFGLK APS+FQK M  
Sbjct: 1410 LKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIK 1469

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
            I++ +L + LIYIDDILLFS +  DH +LL +F+DI   +GIMLS KKS
Sbjct: 1470 IFQPLLSNALIYIDDILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKS 1518


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  155 bits (392), Expect = 6e-36
 Identities = 72/109 (66%), Positives = 87/109 (79%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            LK A IFSKF LK+ FWQLGI+P +RYKTAFCIPNA +QWTV+PFGLK APS+FQK M  
Sbjct: 1423 LKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIK 1482

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
            I++ +L + LIYIDDILLFS +  DH +LL +F+DI   +GIMLS KKS
Sbjct: 1483 IFQPLLSNALIYIDDILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKS 1531


>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 279

 Score =  152 bits (385), Expect = 4e-35
 Identities = 72/98 (73%), Positives = 83/98 (84%)
 Frame = -3

Query: 298 LKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTNIYKSILDSCLI 119
           +K+ FWQLGI P DRYKTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT I++ I+DS LI
Sbjct: 1   MKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRIFEPIIDSILI 60

Query: 118 YIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
           YIDD+LLFSK E+ H QLL +F  I + +GIMLSEKKS
Sbjct: 61  YIDDVLLFSKDEKAHKQLLGQFTQIAQGHGIMLSEKKS 98


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  145 bits (367), Expect = 4e-33
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L +A +FSKF LKA FWQLGI+P+DR KT+FCIP+  +QW V+PFGLKVAPSLFQK MT 
Sbjct: 1316 LPQAQVFSKFDLKAGFWQLGIKPEDRPKTSFCIPDHHFQWKVMPFGLKVAPSLFQKAMTK 1375

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKK 8
            I++ IL + L+YIDDILLFS     H +LL +F  I ++YGIMLSEKK
Sbjct: 1376 IFEPILPNALVYIDDILLFSPDIDSHTRLLEKFHKIVQQYGIMLSEKK 1423


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
            gi|557106803|gb|ESQ47118.1| hypothetical protein
            EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score =  144 bits (363), Expect = 1e-32
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L+ A IFSKF LK+ FWQLG+ P +RYKTAFC+PN   QW V+PFGLK APSLFQ+ M  
Sbjct: 884  LQGATIFSKFDLKSGFWQLGVHPDERYKTAFCLPNRHLQWNVLPFGLKTAPSLFQQAMLR 943

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKK 8
            I+K +L + LIYIDDILLFS +E+DH + LR+F  I +EYGIMLS +K
Sbjct: 944  IFKPLLHTALIYIDDILLFSTSEEDHIRSLRQFQGIVEEYGIMLSARK 991


>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
            gi|557104462|gb|ESQ44802.1| hypothetical protein
            EUTSA_v10003417mg, partial [Eutrema salsugineum]
          Length = 988

 Score =  143 bits (360), Expect = 3e-32
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L+ A IF KF LK+ FWQLG+ P +RYKTAFC+PN   QW V+PFGLK APSLFQ+ M  
Sbjct: 750  LQGATIFFKFDLKSGFWQLGVHPDERYKTAFCLPNRHLQWNVLPFGLKTAPSLFQQAMLR 809

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKSI 2
            I+K +L + LIYIDDILLFS +E+DH + LR+F  I +EYGIMLS +K I
Sbjct: 810  IFKPLLHTALIYIDDILLFSTSEEDHIRSLRQFQGIVEEYGIMLSARKMI 859


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/108 (62%), Positives = 83/108 (76%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L +A +FSKF LKA FWQLGI+P+DR KT FCIP+  +QW V+PFGLKVAPSLFQK MT 
Sbjct: 913  LPQAQVFSKFDLKAGFWQLGIKPEDRPKTGFCIPDHHFQWKVMPFGLKVAPSLFQKAMTK 972

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKK 8
            I++ IL + L+ IDDILLFS     H +LL +F  I ++YGIMLSEKK
Sbjct: 973  IFEPILPNALVNIDDILLFSSDIDSHTRLLEKFHKIVQQYGIMLSEKK 1020


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  141 bits (355), Expect = 1e-31
 Identities = 66/91 (72%), Positives = 78/91 (85%)
 Frame = -3

Query: 331 LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
           LK+A I+SKF +K+ FWQLGI P+D YKTAFCIPNAQYQWTV+PFGLKVAPSLFQK MT 
Sbjct: 242 LKDAQIYSKFDMKSGFWQLGIDPKDCYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTK 301

Query: 151 IYKSILDSCLIYIDDILLFSKTEQDHDQLLR 59
           I++ IL+S LIYIDD+LLFSK E+ H Q L+
Sbjct: 302 IFEPILESILIYIDDVLLFSKDEKAHKQSLQ 332


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score =  140 bits (354), Expect = 1e-31
 Identities = 68/110 (61%), Positives = 81/110 (73%)
 Frame = -3

Query: 331 LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
           L  AH+FSKF LKA FWQLGI P +R KT FCI +  YQW V+PFGLK APSLFQK M  
Sbjct: 77  LSNAHVFSKFDLKAGFWQLGIHPDERPKTGFCITDHHYQWKVMPFGLKTAPSLFQKAMIK 136

Query: 151 IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKSI 2
           I+  IL + LIYIDDILLFS +++ H Q+L +F  +  +YGIMLSEKK I
Sbjct: 137 IFSPILTNALIYIDDILLFSHSQEAHIQILYQFHQLCLQYGIMLSEKKMI 186


>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 441

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = -3

Query: 328 KEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTNI 149
           K+  I+SKFY K+ FWQLG+ P+DR K A CIPNAQYQWT++ FGLKVAPSLFQK MT I
Sbjct: 172 KKRLIYSKFY-KSGFWQLGVDPKDRCKMALCIPNAQYQWTILSFGLKVAPSLFQKTMTRI 230

Query: 148 YKSILDSCLIYI-DDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKS 5
           ++SIL+S LIYI DD+ LFSK E+ H QLL +F  + + YG+MLS+KKS
Sbjct: 231 FESILNSILIYIDDDVFLFSKDEKAHKQLLGQFSHVAQNYGMMLSKKKS 279


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L +A +FSKF LK+ FWQLGI P +R KT FCIP+  +QW V+PFGLK APSLFQK M  
Sbjct: 1470 LSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIK 1529

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKSI 2
            I++ IL S L+YIDDILLFS+T +DH +LL +F  + K++G+MLS KK I
Sbjct: 1530 IFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMI 1579


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L +A +FSKF LK+ FWQLGI P +R KT FCIP+  +QW V+PFGLK APSLFQK M  
Sbjct: 1470 LSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIK 1529

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKSI 2
            I++ IL S L+YIDDILLFS+T +DH +LL +F  + K++G+MLS KK I
Sbjct: 1530 IFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMI 1579


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 331  LKEAHIFSKFYLKARFWQLGIQPQDRYKTAFCIPNAQYQWTVIPFGLKVAPSLFQKGMTN 152
            L +A +FSKF LK+ FWQLGI P +R KT FCIP+  +QW V+PFGLK APSLFQK M  
Sbjct: 1469 LSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIK 1528

Query: 151  IYKSILDSCLIYIDDILLFSKTEQDHDQLLRRFFDITKEYGIMLSEKKSI 2
            I++ IL S L+YIDDILLFS+T +DH +LL +F  + K++G+MLS KK I
Sbjct: 1529 IFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMI 1578


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