BLASTX nr result
ID: Sinomenium21_contig00040758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00040758
(297 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006411634.1| hypothetical protein EUTSA_v10025662mg [Eutr... 78 1e-12
ref|XP_007041720.1| Geranylgeranyl reductase [Theobroma cacao] g... 76 4e-12
ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synt... 76 6e-12
ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synt... 75 1e-11
emb|CBI37811.3| unnamed protein product [Vitis vinifera] 75 1e-11
emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera] 75 1e-11
dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasi... 74 2e-11
ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta... 73 4e-11
gb|AEZ55680.1| geranyl diphosphate synthase small subunit type I... 72 6e-11
gb|EYU40459.1| hypothetical protein MIMGU_mgv1a009868mg [Mimulus... 72 8e-11
ref|XP_006341179.1| PREDICTED: heterodimeric geranylgeranyl pyro... 72 1e-10
ref|XP_002306207.2| hypothetical protein POPTR_0004s18610g [Popu... 72 1e-10
ref|XP_007200371.1| hypothetical protein PRUPE_ppa008305mg [Prun... 72 1e-10
ref|XP_004246572.1| PREDICTED: heterodimeric geranylgeranyl pyro... 71 1e-10
gb|EPS71475.1| hypothetical protein M569_03281, partial [Genlise... 71 2e-10
ref|XP_002312936.2| geranylgeranyl pyrophosphate synthase family... 70 2e-10
ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arab... 70 2e-10
gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum ... 70 3e-10
ref|XP_004290755.1| PREDICTED: heterodimeric geranylgeranyl pyro... 69 5e-10
gb|EXB93813.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 69 7e-10
>ref|XP_006411634.1| hypothetical protein EUTSA_v10025662mg [Eutrema salsugineum]
gi|557112804|gb|ESQ53087.1| hypothetical protein
EUTSA_v10025662mg [Eutrema salsugineum]
Length = 336
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +1
Query: 145 NVRCSARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++R S+ +G+S FDLR YWT+LIGEIN+KL+EAIPV+YP IYEAMRYSV
Sbjct: 32 SIRSSSASGSSNNFDLRKYWTTLIGEINEKLDEAIPVKYPAGIYEAMRYSV 82
>ref|XP_007041720.1| Geranylgeranyl reductase [Theobroma cacao]
gi|508705655|gb|EOX97551.1| Geranylgeranyl reductase
[Theobroma cacao]
Length = 415
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/58 (63%), Positives = 45/58 (77%), Gaps = 8/58 (13%)
Frame = +1
Query: 148 VRCSARTGTS--------TQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RC + T S TQFDL++YWT+LI EIN+KLEEAIPV+YPE+IYEAMRYSV
Sbjct: 101 IRCLSSTSLSASSQPSKLTQFDLKTYWTTLIAEINQKLEEAIPVKYPEQIYEAMRYSV 158
>ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 5/55 (9%)
Frame = +1
Query: 148 VRCSART-----GTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RCS+ + S QFDLRSYWT+LI EIN KLEEAIPV+YP++IYEAMRYSV
Sbjct: 31 IRCSSPSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSV 85
>ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
Frame = +1
Query: 148 VRC-----SARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RC S S QFDLRSYWT+LI EIN KLEEAIPV+YP++IYEAMRYSV
Sbjct: 31 IRCTSPSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSV 85
>emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
Frame = +1
Query: 148 VRC-----SARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RC S S QFDLRSYWT+LI EIN KLEEAIPV+YP++IYEAMRYSV
Sbjct: 288 IRCTSPSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSV 342
>emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
Frame = +1
Query: 148 VRC-----SARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RC S S QFDLRSYWT+LI EIN KLEEAIPV+YP++IYEAMRYSV
Sbjct: 31 IRCXSPSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSV 85
>dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 175 STQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
STQFDL++YW +LI EIN+KL++AIP+QYPEEIYEAMRYSV
Sbjct: 9 STQFDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSV 49
>ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/57 (59%), Positives = 45/57 (78%), Gaps = 6/57 (10%)
Frame = +1
Query: 142 INVRCSART------GTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYS 294
I ++C + T STQFDL++YWT+LI EIN+KL++AIPVQ+PE+IYEAMRYS
Sbjct: 32 IRIQCCSPTVSVSSQSKSTQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYS 88
>gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +1
Query: 148 VRCSARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RCSA + S FDL++YWTSLI EI++KL+EAIPV+YP++IYEAMRYSV
Sbjct: 27 IRCSAAS-VSPGFDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSV 75
>gb|EYU40459.1| hypothetical protein MIMGU_mgv1a009868mg [Mimulus guttatus]
Length = 329
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/51 (64%), Positives = 46/51 (90%)
Frame = +1
Query: 145 NVRCSARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++RCSA + S++FDL++YWT+LI EI++KL+EAI VQYP++IYEAMRYSV
Sbjct: 26 SIRCSAAS-VSSKFDLKTYWTTLIREIDQKLDEAITVQYPQQIYEAMRYSV 75
>ref|XP_006341179.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like isoform X1 [Solanum
tuberosum] gi|565348359|ref|XP_006341180.1| PREDICTED:
heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like isoform X2 [Solanum
tuberosum] gi|565348361|ref|XP_006341181.1| PREDICTED:
heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like isoform X3 [Solanum
tuberosum]
Length = 334
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/53 (58%), Positives = 45/53 (84%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 VRCSARTGTSTQ---FDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RCS+ T+++ FDL++YWT+LI +IN+KL+EA+PV+YP +IYEAMRYSV
Sbjct: 26 IRCSSSVSTASESIKFDLKTYWTTLITDINQKLDEAVPVKYPNQIYEAMRYSV 78
>ref|XP_002306207.2| hypothetical protein POPTR_0004s18610g [Populus trichocarpa]
gi|550341336|gb|EEE86718.2| hypothetical protein
POPTR_0004s18610g [Populus trichocarpa]
Length = 347
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/53 (56%), Positives = 45/53 (84%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 VRCSARTGTST---QFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++CS + + QFDL++YWT+LIGEIN++L++A+P+QYP++IYEAMRYSV
Sbjct: 37 IQCSLSVSSQSKTAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAMRYSV 89
>ref|XP_007200371.1| hypothetical protein PRUPE_ppa008305mg [Prunus persica]
gi|462395771|gb|EMJ01570.1| hypothetical protein
PRUPE_ppa008305mg [Prunus persica]
Length = 337
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 8/58 (13%)
Frame = +1
Query: 148 VRCSARTGT--------STQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RCS+ + STQFDL++YWT+LI +IN+KL EA+PV+YP++IYE+MRYSV
Sbjct: 23 IRCSSSSSAPSVSPPPNSTQFDLKTYWTTLIADINQKLHEAVPVRYPDQIYESMRYSV 80
>ref|XP_004246572.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like isoform 1 [Solanum
lycopersicum] gi|460402142|ref|XP_004246573.1|
PREDICTED: heterodimeric geranylgeranyl pyrophosphate
synthase small subunit, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 334
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/53 (58%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 VRCSARTGT---STQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++CS+ T S +FDL++YWT+LI +IN+KL+EA+PV+YP +IYEAMRYSV
Sbjct: 26 IQCSSSVSTASESVKFDLKTYWTTLISDINQKLDEAVPVKYPNQIYEAMRYSV 78
>gb|EPS71475.1| hypothetical protein M569_03281, partial [Genlisea aurea]
Length = 291
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 175 STQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
S QFDL++YW+ LI EIN+KLEEAIPVQYP++IYEAMRYSV
Sbjct: 3 SYQFDLKTYWSDLIKEINQKLEEAIPVQYPKQIYEAMRYSV 43
>ref|XP_002312936.2| geranylgeranyl pyrophosphate synthase family protein [Populus
trichocarpa] gi|550331696|gb|EEE86891.2| geranylgeranyl
pyrophosphate synthase family protein [Populus
trichocarpa]
Length = 345
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/53 (58%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 VRCSARTGTST---QFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++CS T + QFDL++YWT+LI EIN+KL++A+P+QYP++IYEAMRYSV
Sbjct: 35 IQCSLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSV 87
>ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata] gi|297312635|gb|EFH43058.1| hypothetical protein
ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata]
Length = 310
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +1
Query: 157 SARTGTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
S+ G+S+ FDLR+YWT+LI EIN+KL+EAIPV++P IYEAMRYSV
Sbjct: 25 SSSAGSSSNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSV 71
>gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/53 (58%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 VRCSARTGT---STQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
++CS+ T S +FDL++YWT+LI +IN+KL+EA+PV+YP +IYEAMRYSV
Sbjct: 26 IQCSSSVSTASESVKFDLKTYWTTLIVDINQKLDEAVPVKYPNQIYEAMRYSV 78
>ref|XP_004290755.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 329
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
Frame = +1
Query: 148 VRCSARTGTSTQ-----FDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYSV 297
+RC A + ST+ FDL++YWT+LI +IN KL EA+PV+YPE IYE+MRYSV
Sbjct: 22 IRCCAASSVSTRSESTRFDLKTYWTTLIADINSKLNEAVPVRYPELIYESMRYSV 76
>gb|EXB93813.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis]
Length = 338
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
Frame = +1
Query: 142 INVRCSART----GTSTQFDLRSYWTSLIGEINKKLEEAIPVQYPEEIYEAMRYS 294
I VRCS+ + S QFDL+ YWT+LI EI++KL+EAIPV+YPE IY AMRYS
Sbjct: 22 IPVRCSSASVSSRSRSLQFDLKKYWTTLITEIDQKLDEAIPVKYPEHIYHAMRYS 76