BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040744
         (414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                50   3e-08
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g...    50   2e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       52   7e-07
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    49   2e-06
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      52   8e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 49.7 bits (117), Expect(3) = 3e-08
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -2

Query: 353  YMDKLYILKIRMLI*VCGKRLKDIIRNKYIWEKVEVAPIKDNLR*N*LSWFGHM**KALD 174
            ++ K+ + ++RML  +CG   KD IRN+ I  KV VA I+  +R N L WFGH+  +  D
Sbjct: 867  HVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTD 926

Query: 173  DSVRKSD 153
              +R+ D
Sbjct: 927  APIRRCD 933



 Score = 28.9 bits (63), Expect(3) = 3e-08
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -1

Query: 99   IKKDITTCEIMEDPTLDRMK*RTQIHVAD 13
            ++KD+   ++ +D T DR + R++IH+AD
Sbjct: 955  LRKDLEYLDLTKDMTQDRAQWRSKIHIAD 983



 Score = 24.3 bits (51), Expect(3) = 3e-08
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 412 AIR*AVLYKTKCWSL 368
           AIR A+LY T+CW++
Sbjct: 849 AIRPAMLYGTECWAV 863


>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 28/67 (41%), Positives = 41/67 (61%)
 Frame = -2

Query: 353 YMDKLYILKIRMLI*VCGKRLKDIIRNKYIWEKVEVAPIKDNLR*N*LSWFGHM**KALD 174
           ++ K+ + ++RML  +CG   KD IRN+ I  KV VA I+  +R N L WFGH+  +  D
Sbjct: 14  HVHKMGVAEMRMLRGMCGHTRKDKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTD 73

Query: 173 DSVRKSD 153
             VR+ D
Sbjct: 74  APVRRCD 80



 Score = 30.4 bits (67), Expect(2) = 2e-07
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -1

Query: 99  IKKDITTCEIMEDPTLDRMK*RTQIHVAD 13
           ++KD+   ++ ED T DR + R++IH+AD
Sbjct: 102 LRKDLEYLDLTEDMTQDRAQWRSRIHIAD 130


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 51.6 bits (122), Expect(3) = 7e-07
 Identities = 27/65 (41%), Positives = 43/65 (66%)
 Frame = -2

Query: 347 DKLYILKIRMLI*VCGKRLKDIIRNKYIWEKVEVAPIKDNLR*N*LSWFGHM**KALDDS 168
           +K+ + ++RML  +CGK  +D IRN+ I E+V VAPI + +  N L WFGH+  + +D  
Sbjct: 261 NKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSV 320

Query: 167 VRKSD 153
           +R+ D
Sbjct: 321 LRRVD 325



 Score = 23.1 bits (48), Expect(3) = 7e-07
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 412 AIR*AVLYKTKCWSL 368
           A+R  +LY T+CW++
Sbjct: 241 AVRPTILYGTECWAV 255



 Score = 23.1 bits (48), Expect(3) = 7e-07
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 99  IKKDITTCEIMEDPTLDRMK*RTQIHVAD 13
           IKKD+    +     LDR   R  IHVAD
Sbjct: 347 IKKDLEINGLDRSMVLDRTLWRKLIHVAD 375


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 48.5 bits (114), Expect(3) = 2e-06
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -2

Query: 353 YMDKLYILKIRMLI*VCGKRLKDIIRNKYIWEKVEVAPIKDNLR*N*LSWFGHM**KALD 174
           ++ K+ + ++RML  +CG   KD IRN+ I  KV VA I+ N+R N L WFGH+  +   
Sbjct: 93  HVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTY 152

Query: 173 DSVRKSD 153
             +R+ D
Sbjct: 153 APIRRCD 159



 Score = 25.4 bits (54), Expect(3) = 2e-06
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -1

Query: 99  IKKDITTCEIMEDPTLDRMK*RTQIHVAD 13
           ++KD+   ++ +D T DR +  ++IH+AD
Sbjct: 181 LRKDLGYLDLTKDMTQDRAQWCSKIHIAD 209



 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 409 IR*AVLYKTKCWSL 368
           IR A+LY T+CW++
Sbjct: 76  IRPAMLYGTECWAV 89


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 52.0 bits (123), Expect(2) = 8e-06
 Identities = 30/80 (37%), Positives = 49/80 (61%)
 Frame = -2

Query: 359  RNYMDKLYILKIRMLI*VCGKRLKDIIRNKYIWEKVEVAPIKDNLR*N*LSWFGHM**KA 180
            R ++ K+ + ++RML  + G+   D I+N+ I  KV VAPI+D +R   L WFGH+  + 
Sbjct: 978  RQHISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRLRWFGHVQRRP 1037

Query: 179  LDDSVRKSDVLLLMKPNKKR 120
            L+  VR  + +L+  PN +R
Sbjct: 1038 LEAPVRAWEDILI--PNTRR 1055



 Score = 23.1 bits (48), Expect(2) = 8e-06
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 409  IR*AVLYKTKCWSL 368
            IR A+LY +KCW++
Sbjct: 963  IRPAMLYGSKCWAI 976