BLASTX nr result
ID: Sinomenium21_contig00040730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00040730
(274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 147 2e-33
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 145 6e-33
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 142 6e-32
ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [A... 140 2e-31
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 139 3e-31
gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 138 7e-31
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ... 138 7e-31
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr... 134 1e-29
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 134 1e-29
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr... 133 3e-29
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps... 133 3e-29
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 132 4e-29
emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana] 132 7e-29
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 132 7e-29
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal... 132 7e-29
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 132 7e-29
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat... 132 7e-29
dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol... 132 7e-29
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof... 131 1e-28
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof... 131 1e-28
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 147 bits (370), Expect = 2e-33
Identities = 68/90 (75%), Positives = 80/90 (88%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ EEYRE+ +EMCE LAPNLP+VK+LFLGWFEPL EAIDKEQR Q +K+QKA+Y
Sbjct: 156 EAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAY 215
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADKMAVIVMHKMMGL+M+G +E
Sbjct: 216 APHIELLPADKMAVIVMHKMMGLVMMGHEE 245
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 145 bits (366), Expect = 6e-33
Identities = 67/90 (74%), Positives = 80/90 (88%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ EEYRE+ +EMCE LAPNLP+VK+LFLGWFEPL EAI+KEQR Q +K+QKA+Y
Sbjct: 156 EAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIEKEQRAQRTKKQKAAY 215
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADKMAVIVMHKMMGL+M+G +E
Sbjct: 216 APHIELLPADKMAVIVMHKMMGLVMMGHEE 245
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 142 bits (357), Expect = 6e-32
Identities = 66/90 (73%), Positives = 81/90 (90%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ AEEY LVKEMCE LAPNLP+VKSLFLGWFEPL EAI++EQ+L++SK+QK+++
Sbjct: 158 EAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAF 217
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+P I LLPADKMAVIVMHKMMGL+MVG ++
Sbjct: 218 SPNIELLPADKMAVIVMHKMMGLVMVGHED 247
>ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [Amborella trichopoda]
gi|548861119|gb|ERN18503.1| hypothetical protein
AMTR_s00065p00022170 [Amborella trichopoda]
Length = 987
Score = 140 bits (353), Expect = 2e-31
Identities = 65/89 (73%), Positives = 74/89 (83%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ EYREL+ EMCE LAPNLP++KSLFLGWFEPL +AI +EQ LQE+KR K Y
Sbjct: 162 EAWERAVREYRELISEMCEQKLAPNLPYMKSLFLGWFEPLRDAIAEEQALQETKRAKTGY 221
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPD 6
APYIGLL ADKMAVIVMHK+MGL+M G D
Sbjct: 222 APYIGLLTADKMAVIVMHKLMGLMMTGQD 250
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 139 bits (351), Expect = 3e-31
Identities = 64/90 (71%), Positives = 80/90 (88%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ A+EYR LV+EMCE LAPNLP+VK L LGWFEPL EAI+KEQ++++SK+QK+++
Sbjct: 58 EAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAF 117
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+P I LLPADKMAVIVMHKMMGLLMVG ++
Sbjct: 118 SPNIELLPADKMAVIVMHKMMGLLMVGHED 147
>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
Length = 941
Score = 138 bits (348), Expect = 7e-31
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE + EEYREL +EMCE LAPNLP+VK L LGWFEPL EAI+KEQ Q SK+ KA++
Sbjct: 116 EAWENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSKKNKAAF 175
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LPADKMAVIVMHKMMGLLM+G E
Sbjct: 176 APFIDALPADKMAVIVMHKMMGLLMMGGKE 205
>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
[Ricinus communis] gi|223532193|gb|EEF33998.1|
DNA-directed RNA polymerase 3B, chloroplast precursor,
putative [Ricinus communis]
Length = 1000
Score = 138 bits (348), Expect = 7e-31
Identities = 65/90 (72%), Positives = 75/90 (83%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ EEY+ LVKEMCE LAPNLP+VK LFLGWFEPL E I EQ LQ SK+ KA++
Sbjct: 163 EAWERMVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAF 222
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADKMAVIVMHKM+GLLMVG ++
Sbjct: 223 APHIELLPADKMAVIVMHKMVGLLMVGHED 252
>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556793|gb|ESR66807.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 986
Score = 134 bits (337), Expect = 1e-29
Identities = 60/90 (66%), Positives = 77/90 (85%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ +EY+EL +M E LAPNLPH+K LFLGWF PL+EAI++EQ++Q +K+QKA+Y
Sbjct: 188 EAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAY 247
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 248 APHIELLPADKMAVIVMHKMMGLVMAGHED 277
>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556792|gb|ESR66806.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 1012
Score = 134 bits (337), Expect = 1e-29
Identities = 60/90 (66%), Positives = 77/90 (85%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ +EY+EL +M E LAPNLPH+K LFLGWF PL+EAI++EQ++Q +K+QKA+Y
Sbjct: 188 EAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAY 247
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 248 APHIELLPADKMAVIVMHKMMGLVMAGHED 277
>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
gi|557106040|gb|ESQ46365.1| hypothetical protein
EUTSA_v10000030mg [Eutrema salsugineum]
Length = 993
Score = 133 bits (334), Expect = 3e-29
Identities = 62/92 (67%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWEK +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 172 EAWEKMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 231
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 232 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 263
>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
gi|482564829|gb|EOA29019.1| hypothetical protein
CARUB_v10025273mg [Capsella rubella]
Length = 991
Score = 133 bits (334), Expect = 3e-29
Identities = 62/92 (67%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWEK +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 170 EAWEKMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 229
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 230 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 261
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 132 bits (333), Expect = 4e-29
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWEK EEY+EL +EMCE LAPNLP+VK LFLGWFEPL AI++EQ+ Q SK+QKA++
Sbjct: 153 EAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAF 212
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LL ADKMAVIVM+KMMGLLM+ +
Sbjct: 213 APHIELLSADKMAVIVMYKMMGLLMMAAQD 242
>emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 282
Score = 132 bits (331), Expect = 7e-29
Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWE+ +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 172 EAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 231
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 232 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 263
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Citrus sinensis]
Length = 1009
Score = 132 bits (331), Expect = 7e-29
Identities = 59/90 (65%), Positives = 76/90 (84%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQESKRQKASY 93
EAWE+ +EY+EL +M E LAPNLPH+K LFLGWF PL EAI++EQ++Q +K+QKA+Y
Sbjct: 185 EAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAY 244
Query: 92 APYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
AP+I LLPADK+AVIVMHKMMGL+M G ++
Sbjct: 245 APHIELLPADKVAVIVMHKMMGLVMAGHED 274
>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase
3 [Arabidopsis thaliana]
Length = 895
Score = 132 bits (331), Expect = 7e-29
Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWE+ +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 172 EAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 231
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 232 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 263
>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic;
Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|2330564|emb|CAA69717.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|110739160|dbj|BAF01496.1| chloroplast
single subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
polymerase 3 [Arabidopsis thaliana]
Length = 993
Score = 132 bits (331), Expect = 7e-29
Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWE+ +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 172 EAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 231
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 232 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 263
>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 990
Score = 132 bits (331), Expect = 7e-29
Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWE+ +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 169 EAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 228
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 229 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 260
>dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase
[Arabidopsis thaliana]
Length = 786
Score = 132 bits (331), Expect = 7e-29
Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWE+ +EYR+L KEMCE NLAPNLP+VK +FLGWF+PL + I++EQ+LQ +SK+ +A
Sbjct: 172 EAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRA 231
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLMVGPDE 3
+YAP+I LLPADKMAVIVMHKMMGL+M G ++
Sbjct: 232 AYAPHIELLPADKMAVIVMHKMMGLVMSGHED 263
>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 131 bits (329), Expect = 1e-28
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWEK EEYREL +EMCE LAPNLP+VK LFLGWFEP+ EAI +EQ++Q +SK+ +A
Sbjct: 153 EAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRA 212
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLM 18
+YAP+I LLPADKMAVIVMHKMMGL+M
Sbjct: 213 AYAPHIELLPADKMAVIVMHKMMGLVM 239
>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 131 bits (329), Expect = 1e-28
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Frame = -3
Query: 272 EAWEKRAEEYRELVKEMCENNLAPNLPHVKSLFLGWFEPLTEAIDKEQRLQ--ESKRQKA 99
EAWEK EEYREL +EMCE LAPNLP+VK LFLGWFEP+ EAI +EQ++Q +SK+ +A
Sbjct: 31 EAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRA 90
Query: 98 SYAPYIGLLPADKMAVIVMHKMMGLLM 18
+YAP+I LLPADKMAVIVMHKMMGL+M
Sbjct: 91 AYAPHIELLPADKMAVIVMHKMMGLVM 117