BLASTX nr result

ID: Sinomenium21_contig00040722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040722
         (310 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72845.1| NAC protein 1 [Elaeis guineensis]                       56   5e-06
gb|ABB72842.1| NAC protein 1 [Elaeis guineensis] gi|82400211|gb|...    56   5e-06
gb|ABB72843.1| NAC protein 1 splice variant 1 [Elaeis guineensis]      56   5e-06

>gb|ABB72845.1| NAC protein 1 [Elaeis guineensis]
          Length = 303

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -3

Query: 308 DVEND-QFAEPNGLSE-GLHQGNPPQALDSMQPTLTKSKNSFQMG-DHVKLEDSNWFMDL 138
           D++ND  F + + +++ G H   PPQA + MQ     +   +Q   +    E+++WF DL
Sbjct: 204 DIDNDVMFPDFDDMAQVGAH---PPQAFNGMQGVRVNNITGYQPAIEQRPKEENDWFTDL 260

Query: 137 KLDDLQNSAGGFGGAPLQDLTYQDYNFSGLWSPHLKSYPANLLSF 3
            LDD  ++   FG  P  D++  DY +S L  P L+S  ++LL F
Sbjct: 261 NLDDFHSTCMAFGSTPALDMSDHDYYYSNL--PQLRSNQSDLLPF 303


>gb|ABB72842.1| NAC protein 1 [Elaeis guineensis] gi|82400211|gb|ABB72844.1| NAC
           protein 1 splice variant 2 [Elaeis guineensis]
          Length = 303

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -3

Query: 308 DVEND-QFAEPNGLSE-GLHQGNPPQALDSMQPTLTKSKNSFQMG-DHVKLEDSNWFMDL 138
           D++ND  F + + +++ G H   PPQA + MQ     +   +Q   +    E+++WF DL
Sbjct: 204 DIDNDVMFPDFDDMAQVGAH---PPQAFNGMQGVRVNNITGYQPAIEQRPKEENDWFTDL 260

Query: 137 KLDDLQNSAGGFGGAPLQDLTYQDYNFSGLWSPHLKSYPANLLSF 3
            LDD  ++   FG  P  D++  DY +S L  P L+S  ++LL F
Sbjct: 261 NLDDFHSTCMAFGSTPALDMSDHDYYYSNL--PQLRSNQSDLLPF 303


>gb|ABB72843.1| NAC protein 1 splice variant 1 [Elaeis guineensis]
          Length = 335

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -3

Query: 308 DVEND-QFAEPNGLSE-GLHQGNPPQALDSMQPTLTKSKNSFQMG-DHVKLEDSNWFMDL 138
           D++ND  F + + +++ G H   PPQA + MQ     +   +Q   +    E+++WF DL
Sbjct: 236 DIDNDVMFPDFDDMAQVGAH---PPQAFNGMQGVRVNNITGYQPAIEQRPKEENDWFTDL 292

Query: 137 KLDDLQNSAGGFGGAPLQDLTYQDYNFSGLWSPHLKSYPANLLSF 3
            LDD  ++   FG  P  D++  DY +S L  P L+S  ++LL F
Sbjct: 293 NLDDFHSTCMAFGSTPALDMSDHDYYYSNL--PQLRSNQSDLLPF 335


Top