BLASTX nr result

ID: Sinomenium21_contig00040522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040522
         (753 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    64   3e-12

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 64.3 bits (155), Expect(3) = 3e-12
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 22  MKVDYLPIPFQNSMISSRTKHESFDSFGSHAQLL 123
           MKVDY  IPFQNS+I SRTKHESFDSFGSHAQLL
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLL 34



 Score = 28.9 bits (63), Expect(3) = 3e-12
 Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = +2

Query: 131 HSHIFF*-CNELILSSLFLFVFQNIETD 211
           +SHIFF  CNE I SSLF+F  ++IET+
Sbjct: 37  NSHIFFYECNEPIFSSLFIFQ-KDIETN 63



 Score = 25.0 bits (53), Expect(3) = 3e-12
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 216 NLKPEYLEDSSDQTKN 263
           N+ P+Y EDSSD+ KN
Sbjct: 63  NVIPKYSEDSSDKIKN 78


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