BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040319
         (350 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    54   2e-06

>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 53.5 bits (127), Expect(2) = 2e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
 Frame = -2

Query: 289 VLQGPTDRGLNRFPTSGSKVSSTFSQASCYSIFTLNKTAS-----LWYDRLGHPTMLIVN 125
           +L+G  D+GL   P   S  SS   QA  + IF+ + + S     LW++RLGHP++ IVN
Sbjct: 468 LLKGGLDKGLYSVP---SAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHPSLAIVN 524

Query: 124 KMLGCCSLPTVKTSN--FCNS*QLLKA 50
           K+L   +LP     N   C+S QL K+
Sbjct: 525 KVLNHYNLPVFSLQNKLLCDSCQLAKS 551



 Score = 23.5 bits (49), Expect(2) = 2e-06
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 62  IAKSHRLGCVLSSLKSIKPF 3
           +AKSH+L  V +  K++KPF
Sbjct: 548 LAKSHKLPFVRNYSKAMKPF 567