BLASTX nr result

ID: Sinomenium21_contig00040283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00040283
         (520 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006474014.1| PREDICTED: eukaryotic translation initiation...    65   7e-09
ref|XP_002309354.2| hypothetical protein POPTR_0006s19660g [Popu...    64   2e-08
ref|XP_007011901.1| Uncharacterized protein TCM_037031 [Theobrom...    59   5e-07
ref|XP_002529405.1| hypothetical protein RCOM_0623850 [Ricinus c...    58   1e-06

>ref|XP_006474014.1| PREDICTED: eukaryotic translation initiation factor 5B-like [Citrus
           sinensis]
          Length = 464

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -3

Query: 518 KKFKFWCDDCQIGCHSEVVMGDHQKGKKHLARLCAKKENCAAVSAVAT 375
           KKFKFWC+DCQ+G HS VVM  H++GKKH+AR    K+N  AV A ++
Sbjct: 341 KKFKFWCEDCQVGTHSAVVMEGHKRGKKHIARSNESKKNDDAVPATSS 388


>ref|XP_002309354.2| hypothetical protein POPTR_0006s19660g [Populus trichocarpa]
           gi|550336668|gb|EEE92877.2| hypothetical protein
           POPTR_0006s19660g [Populus trichocarpa]
          Length = 269

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 518 KKFKFWCDDCQIGCHSEVVMGDHQKGKKHLARLCAKKENCAAVSA 384
           KKFKFWC+ CQIG +SE+VM  H+KGKKHLARL    +N  AV A
Sbjct: 149 KKFKFWCEMCQIGAYSEMVMEAHKKGKKHLARLQKSSQNGEAVQA 193


>ref|XP_007011901.1| Uncharacterized protein TCM_037031 [Theobroma cacao]
           gi|508782264|gb|EOY29520.1| Uncharacterized protein
           TCM_037031 [Theobroma cacao]
          Length = 495

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -3

Query: 518 KKFKFWCDDCQIGCHSEVVMGDHQKGKKHLARLCAKKENCAAVSAVAT 375
           K+FKFWC  C +G +SEVVM  H+KGK+H+AR+    EN AA  A  T
Sbjct: 401 KRFKFWCKMCLVGAYSEVVMETHKKGKRHIARVQEHDENNAAAPATTT 448


>ref|XP_002529405.1| hypothetical protein RCOM_0623850 [Ricinus communis]
           gi|223531153|gb|EEF33001.1| hypothetical protein
           RCOM_0623850 [Ricinus communis]
          Length = 423

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = -3

Query: 518 KKFKFWCDDCQIGCHSEVVMGDHQKGKKHLARLCAKKENCAAVSAVATPKSGS 360
           KKFKFWC+ C+IG +S VVM  H+KGKKHLA+L    EN   V+ VA+    S
Sbjct: 339 KKFKFWCEMCRIGAYSAVVMEAHEKGKKHLAQLQELGEN-GEVAVVASSSEAS 390


Top