BLASTX nr result

ID: Sinomenium21_contig00039774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00039774
         (507 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    47   3e-06
ref|XP_007198897.1| hypothetical protein PRUPE_ppa015748mg, part...    52   5e-06

>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = -1

Query: 507 DRKIIQSIPISTYGCSDELVWHHTRDGSYSVKTGYFVAKDLD 382
           + +II  IP+S  G  D LVWH    G Y+VK+GYFV + LD
Sbjct: 743 ESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYFVGRLLD 784



 Score = 30.0 bits (66), Expect(2) = 3e-06
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 19/69 (27%)
 Frame = -3

Query: 331  RCWQDIWKLKVPNKLKIFMRRXXXXXXXXXXXL-------------------EDGLHLFF 209
            R W  +W+ +VP K+++   R           L                   ED LHLF 
Sbjct: 801  RLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCSTNVEDSLHLFK 860

Query: 208  KCQASQAFW 182
             C+A Q FW
Sbjct: 861  NCEALQPFW 869


>ref|XP_007198897.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
           gi|462394192|gb|EMJ00096.1| hypothetical protein
           PRUPE_ppa015748mg, partial [Prunus persica]
          Length = 949

 Score = 52.0 bits (123), Expect(2) = 5e-06
 Identities = 21/41 (51%), Positives = 31/41 (75%)
 Frame = -1

Query: 495 IQSIPISTYGCSDELVWHHTRDGSYSVKTGYFVAKDLDRNG 373
           I ++ +S +GC D L+WH T++G Y+VK+GY VA +LD NG
Sbjct: 763 ILAMALSRFGCPDHLMWHFTKNGLYTVKSGYRVAVELDSNG 803



 Score = 23.9 bits (50), Expect(2) = 5e-06
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 331 RCWQDIWKLKVPNKLKIFMR 272
           R W+ IW L V +K++ F +
Sbjct: 821 RLWKSIWGLNVASKIRHFTK 840


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