BLASTX nr result
ID: Sinomenium21_contig00039649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00039649
(1065 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35966.3| unnamed protein product [Vitis vinifera] 337 e-104
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 211 2e-64
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam... 222 4e-64
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi... 221 4e-63
ref|XP_007163351.1| hypothetical protein PHAVU_001G227500g [Phas... 224 4e-63
ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containi... 228 4e-63
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi... 221 7e-63
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 211 1e-62
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi... 224 3e-62
ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi... 206 9e-62
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi... 216 9e-62
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi... 214 1e-61
emb|CBI38215.3| unnamed protein product [Vitis vinifera] 214 1e-61
emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] 210 2e-61
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi... 224 3e-61
ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily p... 207 5e-61
ref|XP_004506592.1| PREDICTED: pentatricopeptide repeat-containi... 223 5e-61
ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi... 218 6e-61
ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily pr... 222 6e-61
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi... 223 6e-61
>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 337 bits (863), Expect(2) = e-104
Identities = 169/264 (64%), Positives = 207/264 (78%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLVNVLSACA LGALE GREVHLYLGRN +D+NVILAT LVDMY++CG IDDACL+FVKT
Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKT 390
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD A+WN MI LA+H G D+LAV SQM G PND+TFIGVLSAC HSGLVEEG+
Sbjct: 391 SEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGR 450
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
VQF++M KH LSPK+ HYACMVDLLGRAG+L EA++LVQN+ +++ ++ C
Sbjct: 451 VQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRI 510
Query: 770 NP----SDKIGEAMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ +DKI E +++ +D ++GF ILLSNIY S GRW DV R RR VKEK +KKP+GCS
Sbjct: 511 HRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCS 570
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
W+EV GVVHRF+VED++HL+S +I
Sbjct: 571 WVEVDGVVHRFVVEDTTHLKSGEI 594
Score = 70.1 bits (170), Expect(2) = e-104
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 3 SVFVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNL 134
SVF+DVN IP N IL TALIDM+SKCGDVEKA R FDG+S KNL
Sbjct: 251 SVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNL 294
Score = 84.3 bits (207), Expect = 8e-14
Identities = 48/155 (30%), Positives = 82/155 (52%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V +LSAC+ L E GR + +++ N++ +N IL T L+DMYS+CG ++ A +F
Sbjct: 230 TMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGV 289
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
K+ WN +I +A+ + M+ PN+IT + VLSAC G +E G+
Sbjct: 290 SCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGR 349
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEA 703
+ + ++ L V +VD+ + G + +A
Sbjct: 350 -EVHLYLGRNGLDLNVILATALVDMYAKCGKIDDA 383
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 738
Score = 211 bits (538), Expect(3) = 2e-64
Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 8/268 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDV-NVILATDLVDMYSRCGSIDDACLVFVK 415
T V++L ACA LGAL+ G+ +H Y+ + + + N L T L+DMY++CG+I+ A VF
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+ K WN MI LA H + AL + QM G P+DITF+GVLSAC H+GLVE G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL 766
+ F++MV + +SPK+ HY CM+DLLGRAG EA L++N+ + + C
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 767 *NPSDKIGE----AMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGC 934
+ + ++GE + E + G +LLSNIY + GRW+DV R R + +KG+KK GC
Sbjct: 547 VHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGC 606
Query: 935 SWIEVGGVVHRFLVEDSSHLESEQIKKI 1018
S IEV VVH FLV D H +S+ I K+
Sbjct: 607 SSIEVDSVVHEFLVGDKVHEQSQDIYKM 634
Score = 48.1 bits (113), Expect(3) = 2e-64
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+++ + + SN+ L ALIDM+SKCGD++KAR F+GI +K+++
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331
Score = 35.4 bits (80), Expect(3) = 2e-64
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
K I WN MI GY +EA+ LF MQ V+PN
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPN 364
Score = 97.1 bits (240), Expect(2) = 7e-18
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V VLSACA G+LE G V ++ + + N+ L L+DMYS+CG +D A +F
Sbjct: 266 TMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD WNVMI +H + +ALA+ +M+ + PND+TF+ +L AC + G ++ GK
Sbjct: 326 CEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGK 385
Score = 21.2 bits (43), Expect(2) = 7e-18
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 51 TALIDMHSKCGDVEKARRFFDGISKKNLV 137
TALI ++ G ++ ARR F+ I ++ V
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAV 230
Score = 71.2 bits (173), Expect = 7e-10
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 31/195 (15%)
Frame = +2
Query: 233 TYTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSI-------- 388
+YT +L +CA +GA + G+++H ++ + ++ + + T L++MY++ G +
Sbjct: 132 SYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFS 191
Query: 389 -----------------------DDACLVFVKTRNKDSAVWNVMIQSLAHHSKGSDALAV 499
DDA +F + +D+ WN MI A + +ALA
Sbjct: 192 KSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAF 251
Query: 500 LSQMEGNGASPNDITFIGVLSACYHSGLVEEGKVQFTNMVVKHSLSPKV*HYACMVDLLG 679
+M+ +PN+ T + VLSAC SG +E G + + H L + ++D+
Sbjct: 252 FQEMKRANVAPNESTMVTVLSACAQSGSLELGN-WVRSWIEDHGLGSNLRLVNALIDMYS 310
Query: 680 RAGYLVEAFKLVQNI 724
+ G L +A L + I
Sbjct: 311 KCGDLDKARDLFEGI 325
>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508783730|gb|EOY30986.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 847
Score = 222 bits (565), Expect(3) = 4e-64
Identities = 120/265 (45%), Positives = 165/265 (62%), Gaps = 8/265 (3%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRN-QMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
T ++VL ACA+LGAL+ G+ +H Y+ +N Q N+ L T L+DMY++CGSI+ A VF
Sbjct: 423 TFLSVLPACANLGALDLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNG 482
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
K+ A WN MI LA H AL + SQM G G P+DITF+GVLSAC H+GL++ G
Sbjct: 483 MEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTHAGLLDLG 542
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL 766
+ F++MV ++++SP + HY CMV+LLGRAG EA L+QN+ + + C
Sbjct: 543 RQYFSSMVQEYAISPDLQHYGCMVNLLGRAGLFDEAEALIQNMEMKPDGAIWGSLLGACR 602
Query: 767 *NPSDKIGEA----MLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGC 934
+ ++GE+ +L E + G +LLSNIY GRW+DV R R L+ KG+KK GC
Sbjct: 603 VHKRVELGESVAQRLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGC 662
Query: 935 SWIEVGGVVHRFLVEDSSHLESEQI 1009
S IEV VVH FLV D H ++I
Sbjct: 663 SSIEVDSVVHEFLVSDKVHPRCKEI 687
Score = 42.7 bits (99), Expect(3) = 4e-64
Identities = 16/43 (37%), Positives = 33/43 (76%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+++ + + SN+ L+ ALIDM+SKCGD++ A F+G+ +++++
Sbjct: 345 WINEHGLGSNIHLANALIDMYSKCGDLDTAFDLFEGLQQRDVI 387
Score = 29.6 bits (65), Expect(3) = 4e-64
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 139 WNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
WN MI GY +EA+ LF M ++P+
Sbjct: 389 WNVMIGGYTHMSYYKEALGLFRRMLRSNIEPS 420
Score = 98.2 bits (243), Expect(2) = 5e-19
Identities = 56/161 (34%), Positives = 88/161 (54%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VLSACA G+LE G V ++ + + N+ LA L+DMYS+CG +D A +F
Sbjct: 322 TLVSVLSACAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSKCGDLDTAFDLFEGL 381
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+ +D WNVMI H S +AL + +M + P+D+TF+ VL AC + G ++ GK
Sbjct: 382 QQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGK 441
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQN 721
+ S + + ++D+ + G +EA + V N
Sbjct: 442 WIHAYIDKNFQNSTNISLWTSLIDMYAKCG-SIEAAQQVFN 481
Score = 23.9 bits (50), Expect(2) = 5e-19
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 51 TALIDMHSKCGDVEKARRFFDGISKKNLV 137
TALI + G +E AR+ FD I +++V
Sbjct: 258 TALITGYVSIGYMENARKLFDEIPIRDVV 286
Score = 72.0 bits (175), Expect = 4e-10
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Frame = +2
Query: 233 TYTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFV 412
+YT VL +CA + + G+++H + + ++ + + T L++MY++ G +A LVF
Sbjct: 188 SYTFPFVLKSCAKTASTQEGKQIHGQVLKLGLESDAFVHTSLINMYAQNGEFGNARLVFD 247
Query: 413 KTRNKDSAV-------------------------------WNVMIQSLAHHSKGSDALAV 499
K+ +D+ WN MI A + +ALA
Sbjct: 248 KSHLRDTVSYTALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAF 307
Query: 500 LSQMEGNGASPNDITFIGVLSACYHSGLVEEGKVQFTNMVVKHSLSPKV*HYACMVDLLG 679
+M G PN+ T + VLSAC SG +E G + + +H L + ++D+
Sbjct: 308 FEEMIGANVVPNESTLVSVLSACAQSGSLELG-TWVRSWINEHGLGSNIHLANALIDMYS 366
Query: 680 RAGYLVEAFKLVQNI 724
+ G L AF L + +
Sbjct: 367 KCGDLDTAFDLFEGL 381
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 17/34 (50%), Positives = 28/34 (82%)
Frame = +3
Query: 33 SNVILSTALIDMHSKCGDVEKARRFFDGISKKNL 134
+N+ L T+LIDM++KCG +E A++ F+G+ +KNL
Sbjct: 455 TNISLWTSLIDMYAKCGSIEAAQQVFNGMEQKNL 488
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPNLHVGECVVSLC 267
K + WNAMI+G GL ++A++LF M +KP+ V+S C
Sbjct: 486 KNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSAC 533
>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
[Cucumis sativus]
Length = 781
Score = 221 bits (564), Expect(3) = 4e-63
Identities = 121/274 (44%), Positives = 169/274 (61%), Gaps = 10/274 (3%)
Frame = +2
Query: 236 YTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
+T+V +L+ CA LGALE G+ +H YL N++ ++V++ T L++MYS+CG +D + +F +
Sbjct: 477 FTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYE 536
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+KD+A W +I LA + K S+AL + S+ME GA P+DITFIGVLSAC H GLVEEG
Sbjct: 537 LEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEG 596
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL------GFVA 757
+ F +M H + PKV HY C++DLLGRAG L EA +L+Q I + ++
Sbjct: 597 RRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLS 656
Query: 758 QCL*NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKP 925
C + + +GE + E LL+NIY SV RW D + RR +KE G+KK
Sbjct: 657 ACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKM 716
Query: 926 AGCSWIEVGGVVHRFLVEDSSHLESEQIKKIKGR 1027
GCS IEV G+VH FLV D SH E +I + R
Sbjct: 717 PGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNR 750
Score = 35.0 bits (79), Expect(3) = 4e-63
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 45 LSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+ AL+DM++KCG + AR FD +S KN++
Sbjct: 381 IDNALLDMYAKCGCLNIARNIFDEMSMKNVI 411
Score = 34.3 bits (77), Expect(3) = 4e-63
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 121 LKKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
++ + W AMI GYVQ ++A+ LF MQ VKP+
Sbjct: 438 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPD 475
Score = 62.8 bits (151), Expect(3) = 3e-12
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLY--------------------------LGRNQMDV-- 334
T+V+ LSAC L LE G E+H Y + RN D
Sbjct: 347 TVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMS 406
Query: 335 --NVILATDLVDMYSRCGSIDDACLVFVKTRNKDSAVWNVMIQSLAHHSKGSDALAVLSQ 508
NVI T ++ Y CG + +A +F K+ +D +W MI DA+A+ +
Sbjct: 407 MKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFRE 466
Query: 509 MEGNGASPNDITFIGVLSACYHSGLVEEGK 598
M+ P+ T + +L+ C G +E+GK
Sbjct: 467 MQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496
Score = 30.4 bits (67), Expect(3) = 3e-12
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 139 WNAMITGYVQQGLLEEAIQLFHLMQND 219
WN MI+GYV+ E+AI F MQ +
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQE 338
Score = 25.4 bits (54), Expect(3) = 3e-12
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 54 ALIDMHSKCGDVEKARRFFDGISKKNLV 137
+LIDM+ + +VE A++ FD ++ ++ V
Sbjct: 283 SLIDMYYELSNVENAKKLFDEMTTRDSV 310
>ref|XP_007163351.1| hypothetical protein PHAVU_001G227500g [Phaseolus vulgaris]
gi|561036815|gb|ESW35345.1| hypothetical protein
PHAVU_001G227500g [Phaseolus vulgaris]
Length = 638
Score = 224 bits (571), Expect(3) = 4e-63
Identities = 116/264 (43%), Positives = 170/264 (64%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A + LGALE G+ VHLY +N++ ++ +L + LVDMY++CGSI+ A LVF +
Sbjct: 268 TLVSVLPAISRLGALELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAILVFERL 327
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+ WNV+I LA H K +D LS+ME G SP+D+T+I +LSAC H+GLV++G+
Sbjct: 328 PQNNVITWNVVISGLAMHGKANDVFNYLSKMEKCGISPSDVTYIAILSACSHAGLVDKGR 387
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F++MV + L PK+ HY CMVDLLGRAGYL EA +L+ N+ +++ + C
Sbjct: 388 SFFSDMVNRIGLEPKIEHYGCMVDLLGRAGYLEEAEQLILNMPMKPDDVIWKALLGACKM 447
Query: 770 NPSDKIG----EAMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + +IG E ++ G + LSN+Y S G W+ V R ++K+ ++K GCS
Sbjct: 448 HKNIEIGTRVAEVLMQLAPHDSGAYVALSNMYASTGDWDGVAEVRLMMKDMDIRKDPGCS 507
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
WIE+ GV+H FLVED SH ++ I
Sbjct: 508 WIEIDGVIHEFLVEDDSHPRAKDI 531
Score = 37.7 bits (86), Expect(3) = 4e-63
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFH-LMQNDFVKPN 234
+ + WN MI+GY Q G EAI++F+ +MQN + PN
Sbjct: 228 RSVVSWNVMISGYAQNGFYREAIEVFNRMMQNVDMLPN 265
Score = 28.9 bits (63), Expect(3) = 4e-63
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
NV+L ++D + + G+++ AR FD ++++++V
Sbjct: 198 NVVLCNVMVDGYVRVGNLKAARELFDRMAQRSVV 231
>ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
[Fragaria vesca subsp. vesca]
Length = 684
Score = 228 bits (580), Expect(2) = 4e-63
Identities = 119/264 (45%), Positives = 170/264 (64%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V+++S C ++GAL+ G+ VH Y+ + ++DV+VIL T LVDMY++CG ID A +F +
Sbjct: 314 TMVSLISLCGEVGALDLGKWVHSYINQQRIDVDVILRTALVDMYAKCGEIDVALRLFSEA 373
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
N+DS +WNVMI LA H G AL + +M+ G PNDITFIG+L AC H+GLV +GK
Sbjct: 374 INRDSQMWNVMITGLAMHGCGKQALELFEEMQRQGVKPNDITFIGLLHACSHAGLVADGK 433
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F MV SL+PKV HY CMVDLLGRAG L EA KL++++ N + +A C
Sbjct: 434 KIFEKMVHDFSLAPKVEHYGCMVDLLGRAGKLDEAHKLIKSMPLEPNTIVWGSLLAACKT 493
Query: 770 NPSDKIGEA----MLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ S + E +L E + G+ +L+SNIY + +W DV R+ +K++G KK G S
Sbjct: 494 HKSPNLAEVAARQLLKLEPQNCGYNVLMSNIYAASNKWVDVAGVRKAMKDQGTKKEPGLS 553
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
IEV G VH F++ D +H ++ +I
Sbjct: 554 SIEVNGAVHDFMMGDKTHPQTRKI 577
Score = 42.0 bits (97), Expect(2) = 4e-63
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +3
Query: 21 NAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLVL 140
N ++ L+TAL+DM+ KCG+ E AR FD I +K++++
Sbjct: 240 NGFVMSLALATALVDMYGKCGEAEYARAVFDSIEEKDVMI 279
Score = 85.9 bits (211), Expect(2) = 2e-20
Identities = 45/158 (28%), Positives = 87/158 (55%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+++++ ++GALE G+ +H Y+ RN +++ LAT LVDMY +CG + A VF
Sbjct: 213 TVLSLIIESGNVGALELGKWLHAYVLRNGFVMSLALATALVDMYGKCGEAEYARAVFDSI 272
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD +W+ MI + + ++ + A + ++M+ +G PN +T + ++S C G ++ GK
Sbjct: 273 EEKDVMIWSAMISAYSRANQTNQASELFARMKDSGVRPNQVTMVSLISLCGEVGALDLGK 332
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKL 712
+ + + + V +VD+ + G + A +L
Sbjct: 333 -WVHSYINQQRIDVDVILRTALVDMYAKCGEIDVALRL 369
Score = 41.2 bits (95), Expect(2) = 2e-20
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3
Query: 39 VILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
V ++TAL+DM+ KCG++ ARR FDG+++K++V
Sbjct: 145 VPVTTALVDMYVKCGNLGYARRLFDGLAEKSVV 177
Score = 55.1 bits (131), Expect(3) = 3e-09
Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Frame = +2
Query: 242 LVNVLSACADLGALEFGREVHLYLGRNQMDVNVIL--ATDLVDMYSRCGSIDDACLVFVK 415
+++++ AD+ ++ + +H Y+ RN + +++ T LVDMY +CG++ A +F
Sbjct: 111 MISMIGLFADIADVKMAKAMHCYVVRNSANEKLVVPVTTALVDMYVKCGNLGYARRLFDG 170
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
K W MI ++ + + + +M PN+IT + ++ + G +E G
Sbjct: 171 LAEKSVVSWTTMIAGCIRCNEVEEGVKLFKRMLEERKFPNEITVLSLIIESGNVGALELG 230
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAG 688
K V+++ + +VD+ G+ G
Sbjct: 231 K-WLHAYVLRNGFVMSLALATALVDMYGKCG 260
Score = 28.1 bits (61), Expect(3) = 3e-09
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+ + ALI M+ +CG +E AR FD + ++++V
Sbjct: 41 DAFVCNALIKMYGECGRLELARLVFDVMCERDVV 74
Score = 25.4 bits (54), Expect(3) = 3e-09
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 139 WNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
W+ MI GYV+ EA+++ M VKP+
Sbjct: 76 WSTMINGYVRNRGFGEALEVIREMHFLQVKPS 107
Score = 61.2 bits (147), Expect = 7e-07
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 236 YTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
+T+ +VL AC GRE+H + + +D + + L+ MY CG ++ A LVF
Sbjct: 8 FTIPSVLKACGQSSVEMLGREIHGFALKGGLDCDAFVCNALIKMYGECGRLELARLVFDV 67
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+D W+ MI + +AL V+ +M P+++ I ++ V+
Sbjct: 68 MCERDVVSWSTMINGYVRNRGFGEALEVIREMHFLQVKPSEVAMISMIGLFADIADVKMA 127
Query: 596 KVQFTNMVVKHSLSPK--V*HYACMVDLLGRAGYLVEAFKLVQNIS 727
K VV++S + K V +VD+ + G L A +L ++
Sbjct: 128 KAMHC-YVVRNSANEKLVVPVTTALVDMYVKCGNLGYARRLFDGLA 172
>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 221 bits (563), Expect(3) = 7e-63
Identities = 121/274 (44%), Positives = 169/274 (61%), Gaps = 10/274 (3%)
Frame = +2
Query: 236 YTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
+T+V +L+ CA LGALE G+ +H YL N++ ++V++ T L++MYS+CG +D + +F +
Sbjct: 431 FTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYE 490
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+KD+A W +I LA + K S+AL + S+ME GA P+DITFIGVLSAC H GLVEEG
Sbjct: 491 LEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEG 550
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL------GFVA 757
+ F +M H + PKV HY C++DLLGRAG L EA +L+Q I + ++
Sbjct: 551 RRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLS 610
Query: 758 QCL*NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKP 925
C + + +GE + E LL+NIY SV RW D + RR +KE G+KK
Sbjct: 611 ACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKM 670
Query: 926 AGCSWIEVGGVVHRFLVEDSSHLESEQIKKIKGR 1027
GCS IEV G+VH FLV D SH E +I + R
Sbjct: 671 PGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNR 704
Score = 35.0 bits (79), Expect(3) = 7e-63
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 45 LSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+ AL+DM++KCG + AR FD +S KN++
Sbjct: 335 IDNALLDMYAKCGCLNIARNIFDEMSMKNVI 365
Score = 33.9 bits (76), Expect(3) = 7e-63
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 121 LKKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
++ + W AMI GYVQ ++A+ LF MQ +KP+
Sbjct: 392 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPD 429
Score = 62.4 bits (150), Expect(3) = 4e-12
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLY--------------------------LGRNQMDV-- 334
T+V+ LSAC L LE G E+H Y + RN D
Sbjct: 301 TVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMS 360
Query: 335 --NVILATDLVDMYSRCGSIDDACLVFVKTRNKDSAVWNVMIQSLAHHSKGSDALAVLSQ 508
NVI T ++ Y CG + +A +F K+ +D +W MI DA+A+ +
Sbjct: 361 MKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFRE 420
Query: 509 MEGNGASPNDITFIGVLSACYHSGLVEEGK 598
M+ P+ T + +L+ C G +E+GK
Sbjct: 421 MQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450
Score = 30.4 bits (67), Expect(3) = 4e-12
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 139 WNAMITGYVQQGLLEEAIQLFHLMQND 219
WN MI+GYV+ E+AI F MQ +
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQE 292
Score = 25.4 bits (54), Expect(3) = 4e-12
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 54 ALIDMHSKCGDVEKARRFFDGISKKNLV 137
+LIDM+ + +VE A++ FD ++ ++ V
Sbjct: 237 SLIDMYYELSNVENAKKLFDEMTTRDSV 264
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 211 bits (538), Expect(3) = 1e-62
Identities = 113/266 (42%), Positives = 162/266 (60%), Gaps = 9/266 (3%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+ LSACA LGA++ G +H+Y+ + M +N L T L+DMY +CG + A +VF
Sbjct: 372 TLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV 431
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD VW+ MI LA H G DA+A+ S+M+ + PN +TF +L AC H GLVEEG+
Sbjct: 432 ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGR 491
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNI-----ST*FNNLGFVAQC 763
F M + + + P V HYACMVD+LGRAG L EA +L++ + ++ + L + C
Sbjct: 492 TFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGAL--LGAC 549
Query: 764 L*NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAG 931
+ + + E S E + G +LLSNIY G+W+ V R+L+++ GLKK G
Sbjct: 550 TIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPG 609
Query: 932 CSWIEVGGVVHRFLVEDSSHLESEQI 1009
CS IEV G+VH FLV D+SH +++I
Sbjct: 610 CSSIEVDGIVHEFLVGDNSHPSAKKI 635
Score = 45.1 bits (105), Expect(3) = 1e-62
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+++ N I ++ LS A++DM++KCG VE A+R FD + +K++V
Sbjct: 262 YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304
Score = 32.7 bits (73), Expect(3) = 1e-62
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 130 IWCWNAMITGYVQQGLLEEAIQLFHLMQ 213
I WNA+I+ Y Q G +EA++LFH +Q
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQ 361
Score = 79.0 bits (193), Expect = 3e-12
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 32/151 (21%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK- 415
T+V VLSACA EFGR VH Y+ RN++ ++ L+ ++DMY++CGS++DA +F K
Sbjct: 239 TMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKM 298
Query: 416 ------------------------------TRNKDSAVWNVMIQSLAHHSKGSDALAVLS 505
N+D A WN +I + K +AL +
Sbjct: 299 PEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFH 358
Query: 506 QME-GNGASPNDITFIGVLSACYHSGLVEEG 595
+++ A P+++T + LSAC G ++ G
Sbjct: 359 ELQLSKTAKPDEVTLVSTLSACAQLGAMDLG 389
Score = 64.7 bits (156), Expect = 6e-08
Identities = 40/159 (25%), Positives = 74/159 (46%)
Frame = +2
Query: 236 YTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
+T ++ A ++L L G+ H + + + +V + L+ Y++CG + VFV
Sbjct: 137 FTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVN 196
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+D WN MI + +AL + +ME PN IT +GVLSAC E G
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKL 712
+ + + ++ + + M+D+ + G + +A +L
Sbjct: 257 R-WVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Score = 38.9 bits (89), Expect(2) = 8e-06
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 6 VFVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNL 134
V++ + N L+T+LIDM+ KCGD++KA F + +K++
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 436
Score = 38.5 bits (88), Expect(2) = 8e-06
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
K ++ W+AMI G G ++AI LF MQ D VKPN
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470
>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 224 bits (570), Expect(2) = 3e-62
Identities = 118/264 (44%), Positives = 167/264 (63%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V++LS+CA LGALE G+ VH ++ + +M + V L T L+D Y++CGS++ + VF K
Sbjct: 328 TMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKM 387
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
K+ W V+IQ LA + +G AL M PND+TFIGVLSAC H+GLV+EG+
Sbjct: 388 PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGR 447
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F +M + P++ HY CMVD+LGRAG + EAF+ ++N+ N + +A C
Sbjct: 448 DLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKV 507
Query: 770 NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + +IGE L E + G ILLSNIY SVGRW D ++ R +KEKG+KK GCS
Sbjct: 508 HKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCS 567
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
IE+ GV+H F ED+ H +SE+I
Sbjct: 568 LIELDGVIHEFFAEDNVHSQSEEI 591
Score = 43.1 bits (100), Expect(2) = 3e-62
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+V+ + N L T+L+DM++KCG V+ ARR FD + ++++V
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVV 292
Score = 88.2 bits (217), Expect(2) = 2e-19
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL+AC L LE G ++ Y+ + N L T LVDMY++CG +D A +F +
Sbjct: 227 TLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM 286
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+D W+ MI + S+ +AL + +M+ PN+IT + +LS+C G +E GK
Sbjct: 287 DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGK 346
Score = 35.4 bits (80), Expect(2) = 2e-19
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 33 SNVILSTALIDMHSKCGDVEKARRFFDGISKKNL 134
S+ + LI M++ CG+VE ARR FD +S++N+
Sbjct: 157 SHGFVKNTLIHMYANCGEVEVARRVFDEMSERNV 190
>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Cucumis sativus] gi|449524140|ref|XP_004169081.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 206 bits (525), Expect(3) = 9e-62
Identities = 113/264 (42%), Positives = 159/264 (60%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V+VL +CA LGA E G+ VH Y+ + +M + V L T L+D Y++CG ID + VF +
Sbjct: 325 TMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEM 384
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
K+ W +IQ LA++ +G AL S M N PND+TFIGVLSAC H+ LV++G+
Sbjct: 385 SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGR 444
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F +M + P++ HY CMVD+LGRAG+L EA++ + N+ N + +A C
Sbjct: 445 HLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRA 504
Query: 770 NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + ++ E L E + G ILLSN Y VGR D +R R L+KEK +KK GCS
Sbjct: 505 HKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCS 564
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
IE+ GVVH F ED H S++I
Sbjct: 565 LIELDGVVHEFFSEDGEHKHSKEI 588
Score = 41.2 bits (95), Expect(3) = 9e-62
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
N L+T+LIDM++KCG V+ AR+ FD + K+++V
Sbjct: 256 NNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVV 289
Score = 38.5 bits (88), Expect(3) = 9e-62
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
+ + W+AMI+GY Q +EA+ LFH MQ V PN
Sbjct: 286 RDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPN 322
Score = 85.5 bits (210), Expect(3) = 9e-22
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+++VL AC L LE G + Y+ + N L T L+DMY++CG +D A +F +
Sbjct: 224 TMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM 283
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+D W+ MI A + +AL + +M+ PN++T + VL +C G E GK
Sbjct: 284 DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK 343
Query: 599 -VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYL---VEAFK 709
V F + K + V ++D + GY+ VE FK
Sbjct: 344 WVHF--YIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFK 382
Score = 33.5 bits (75), Expect(3) = 9e-22
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 33 SNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
SN + LI M++ CG + AR FDG+ ++++V
Sbjct: 154 SNEFVENTLIQMYANCGQIGVARHVFDGMPERSIV 188
Score = 32.3 bits (72), Expect(3) = 9e-22
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLF 201
+ I WN+M++GY + GL +E ++LF
Sbjct: 185 RSIVAWNSMLSGYTKNGLWDEVVKLF 210
Score = 57.4 bits (137), Expect = 1e-05
Identities = 39/159 (24%), Positives = 69/159 (43%)
Frame = +2
Query: 236 YTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVK 415
+T +VL AC+ + AL G +VH + ++ N + L+ MY+ CG I A VF
Sbjct: 122 FTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDG 181
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
+ WN M+ + + + + ++ +D+T I VL AC +E G
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG 241
Query: 596 KVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKL 712
++ +V L ++D+ + G + A KL
Sbjct: 242 EL-IGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKL 279
>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Glycine max]
Length = 638
Score = 216 bits (550), Expect(3) = 9e-62
Identities = 114/264 (43%), Positives = 164/264 (62%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A + LG LE G+ VHLY +N++ ++ +L + LVDMY++CGSI+ A VF +
Sbjct: 268 TLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERL 327
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+ WN +I LA H K +D LS+ME G SP+D+T+I +LSAC H+GLV+EG+
Sbjct: 328 PQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGR 387
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F +MV L PK+ HY CMVDLLGRAGYL EA +L+ N+ +++ +
Sbjct: 388 SFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKM 447
Query: 770 NPSDKIG----EAMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + KIG E ++ G + LSN+Y S G W+ V R ++K+ ++K GCS
Sbjct: 448 HKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCS 507
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
WIE+ GV+H FLVED SH ++ I
Sbjct: 508 WIEIDGVIHEFLVEDDSHSRAKDI 531
Score = 40.0 bits (92), Expect(3) = 9e-62
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFH-LMQNDFVKPN 234
+ + WN MI+GY Q G +EAI++FH +MQ V PN
Sbjct: 228 RSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPN 265
Score = 30.0 bits (66), Expect(3) = 9e-62
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
NV+L ++D +++ G+++ AR FD ++++++V
Sbjct: 198 NVVLCNVMVDGYARVGNLKAARELFDRMAQRSVV 231
>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 617
Score = 214 bits (546), Expect(3) = 1e-61
Identities = 114/267 (42%), Positives = 164/267 (61%), Gaps = 7/267 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV VL++CA+LG LE G+ VH YL RNQ+ + + LVDMY++CGSID AC VF
Sbjct: 330 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAM 389
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD + MI LA H +G AL + S+M G P+++TF+GVL+AC H GLVEEG+
Sbjct: 390 NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 449
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNI---ST*FNNLGFVAQCL* 769
F +M ++L P++ HY CMVDLLGRAG + EA + ++N+ F + C
Sbjct: 450 KYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKI 509
Query: 770 NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ ++GE+++ E G +L+SNIY S RW D ++ R+ +KE+ L+K GCS
Sbjct: 510 HGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCS 569
Query: 938 WIEVGGVVHRFLVEDSSHLESEQIKKI 1018
IE+ GV+H F D SH + ++I K+
Sbjct: 570 SIELDGVIHEFQKGDKSHPKIKEIYKL 596
Score = 36.2 bits (82), Expect(3) = 1e-61
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 121 LKKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
+K + WN+MI+G Q+G +E++ +F MQ VKP+
Sbjct: 290 VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 327
Score = 35.0 bits (79), Expect(3) = 1e-61
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+V + AL+DM+ KCGD AR+ F + KN+V
Sbjct: 261 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVV 294
Score = 90.5 bits (223), Expect = 1e-15
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQ-MDVNVILATDLVDMYSRCGSIDDACLVFVK 415
TLV VLS+CA LG L GR++H Y+ RN ++++V + LVDMY +CG + A VF +
Sbjct: 228 TLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQE 287
Query: 416 TRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEG 595
K+ WN MI LA + ++L + +M+ G P+D+T + VL++C + G++E G
Sbjct: 288 MPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELG 347
Query: 596 K 598
K
Sbjct: 348 K 348
>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 214 bits (546), Expect(3) = 1e-61
Identities = 114/267 (42%), Positives = 164/267 (61%), Gaps = 7/267 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV VL++CA+LG LE G+ VH YL RNQ+ + + LVDMY++CGSID AC VF
Sbjct: 308 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAM 367
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
KD + MI LA H +G AL + S+M G P+++TF+GVL+AC H GLVEEG+
Sbjct: 368 NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 427
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNI---ST*FNNLGFVAQCL* 769
F +M ++L P++ HY CMVDLLGRAG + EA + ++N+ F + C
Sbjct: 428 KYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKI 487
Query: 770 NPSDKIGEAMLSD----EDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ ++GE+++ E G +L+SNIY S RW D ++ R+ +KE+ L+K GCS
Sbjct: 488 HGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCS 547
Query: 938 WIEVGGVVHRFLVEDSSHLESEQIKKI 1018
IE+ GV+H F D SH + ++I K+
Sbjct: 548 SIELDGVIHEFQKGDKSHPKIKEIYKL 574
Score = 36.2 bits (82), Expect(3) = 1e-61
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 121 LKKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
+K + WN+MI+G Q+G +E++ +F MQ VKP+
Sbjct: 268 VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 305
Score = 35.0 bits (79), Expect(3) = 1e-61
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+V + AL+DM+ KCGD AR+ F + KN+V
Sbjct: 239 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVV 272
Score = 69.3 bits (168), Expect = 3e-09
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = +2
Query: 287 FGRE-VHLYLGRNQ-MDVNVILATDLVDMYSRCGSIDDACLVFVKTRNKDSAVWNVMIQS 460
F RE V LY+ RN ++++V + LVDMY +CG + A VF + K+ WN MI
Sbjct: 221 FAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISG 280
Query: 461 LAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
LA + ++L + +M+ G P+D+T + VL++C + G++E GK
Sbjct: 281 LAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK 326
>emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 210 bits (534), Expect(3) = 2e-61
Identities = 107/264 (40%), Positives = 165/264 (62%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V+ LSAC+ LGAL+ G +H Y+ ++++ +NV L T L+DMY++CG I A VF +
Sbjct: 299 TMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL 358
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
++S W +I LA H A+A S+M N P+++TF+G+LSAC H GLVEEG+
Sbjct: 359 PGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGR 418
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNI-----ST*FNNLGFVAQC 763
F+ M K +LSPK+ HY+CMVDLLGRAG L EA +L++++ + + L F +
Sbjct: 419 KYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRI 478
Query: 764 L*N--PSDKIGEAMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
N ++ +L + G +LL+N+Y W + + R+L++++G++K GCS
Sbjct: 479 HGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCS 538
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
IEV G+V+ F+V D SH +SEQI
Sbjct: 539 SIEVNGIVYEFIVRDKSHPQSEQI 562
Score = 43.5 bits (101), Expect(3) = 2e-61
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
+++ N + V L+ AL+DM+ KCG++E AR+ FD ++ K +V
Sbjct: 205 YIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 247
Score = 32.0 bits (71), Expect(3) = 2e-61
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
K + WNAMI GYV +EA+ LF+ MQ + P+
Sbjct: 260 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPD 296
Score = 102 bits (255), Expect(2) = 3e-22
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 16/178 (8%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDA------- 397
T++ V+S+CA L L+ GRE H Y+ N + + V LA L+DMY +CG+++ A
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241
Query: 398 ---------CLVFVKTRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFI 550
++F + +KD WN MI H ++G +ALA+ ++M+ +P+++T +
Sbjct: 242 TNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMV 301
Query: 551 GVLSACYHSGLVEEGKVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNI 724
LSAC G ++ G + + + KH LS V ++D+ + G + +A ++ Q +
Sbjct: 302 SCLSACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL 358
Score = 30.4 bits (67), Expect(2) = 3e-22
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 33 SNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
S++ +S A+I + CGD++ AR+ FD ++LV
Sbjct: 112 SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 146
Score = 62.4 bits (150), Expect = 3e-07
Identities = 42/167 (25%), Positives = 79/167 (47%)
Frame = +2
Query: 227 NQTYTLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLV 406
N TY L+ ACA L + G E+ ++ D ++ ++ ++ + CG +D A +
Sbjct: 79 NYTYPLL--FKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKM 136
Query: 407 FVKTRNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLV 586
F K+ +D WN MI +AL +M+ G P+++T IGV+S+C +
Sbjct: 137 FDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDL 196
Query: 587 EEGKVQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIS 727
+ G+ + ++ L V ++D+ + G L A KL +++
Sbjct: 197 DLGRESHC-YIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMT 242
>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 642
Score = 224 bits (571), Expect(2) = 3e-61
Identities = 115/271 (42%), Positives = 176/271 (64%), Gaps = 9/271 (3%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A A +GALE G+ +HLY G+N+++++ +L + LVDMYS+CGSID+A VF
Sbjct: 272 TLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETL 331
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+++ W+ +I + A H + DA+ M G +PND+ +IG+LSAC H+GLVEEG+
Sbjct: 332 PKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F++MV L P++ HY CMVDLLGRAG+L EA +L++N+ +++ + C
Sbjct: 392 SFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKM 451
Query: 770 NPSDKIGEAM------LSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAG 931
+ + K+GE + L+ DS G + LSN+Y S+G W V R R +K ++K G
Sbjct: 452 HKNLKMGERVAETLMELAPHDS--GSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPG 509
Query: 932 CSWIEVGGVVHRFLVEDSSHLESEQIKKIKG 1024
CSWIE+ G++H FLVED SH ++++I+ + G
Sbjct: 510 CSWIEIHGIIHEFLVEDDSHSKAKEIQAMLG 540
Score = 39.3 bits (90), Expect(2) = 3e-61
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Frame = +1
Query: 76 NVVMWR-------RQGD-----SLMEFL--KKIWCWNAMITGYVQQGLLEEAIQLFHLMQ 213
NVV+W R GD +L + + + + WN MI+GY Q G EAI LF MQ
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 214 NDFVKPN 234
+ + PN
Sbjct: 263 SSNIDPN 269
>ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
gi|508725347|gb|EOY17244.1| Pentatricopeptide repeat
(PPR) superfamily protein [Theobroma cacao]
Length = 646
Score = 207 bits (527), Expect(3) = 5e-61
Identities = 111/264 (42%), Positives = 164/264 (62%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A + LGALE G+ VHLY +N+++++ +L + L+DMYS+CGSID A VF +
Sbjct: 276 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFERI 335
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
++ W+ MI LA H + AL S+ME G +P+D+ +IGVLSAC H+G VEEG+
Sbjct: 336 SKPNTITWSAMIGGLAMHGRAEGALDYFSRMELEGVTPSDVVYIGVLSACSHAGFVEEGR 395
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
+ F +MV P++ HY CMVDLLGRAG L EA + + N+ +++ + C
Sbjct: 396 LFFNHMVNVVGFEPRLEHYGCMVDLLGRAGLLKEAEEFILNMPIEPDDVIWKALLGACKM 455
Query: 770 NPSDKIGE----AMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + ++G+ +++ G + LSNIY S W V R R +KE ++K GCS
Sbjct: 456 HGNIEMGDHVAGILMNMAPRDSGAYVALSNIYASSRDWESVARVRLKMKEMDVRKDPGCS 515
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
+IE+ GVVH FLVED SH +++I
Sbjct: 516 FIELDGVVHEFLVEDDSHPRAKEI 539
Score = 45.1 bits (105), Expect(3) = 5e-61
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +1
Query: 121 LKKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
L+ + WN MI+GY Q G +EAI++F LMQ V+PN
Sbjct: 236 LRSVISWNVMISGYAQNGYFKEAIEMFRLMQIGEVRPN 273
Score = 31.6 bits (70), Expect(3) = 5e-61
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 15 DVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
D I N++L +ID + + GD+ AR FD +S ++++
Sbjct: 200 DKRRIEGNIVLWNVMIDGYVRIGDLRTARELFDKMSLRSVI 240
>ref|XP_004506592.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cicer arietinum]
Length = 639
Score = 223 bits (569), Expect(3) = 5e-61
Identities = 114/267 (42%), Positives = 169/267 (63%), Gaps = 7/267 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A + LGALE G+ VHLY RN + ++ +L + LVDMY++CGSI+ A VF +
Sbjct: 269 TLVSVLPAISRLGALELGKWVHLYAERNGIQIDEVLGSALVDMYAKCGSIEKAVQVFERL 328
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+ WN +I LA H K + L S+ME +G SP+D+T+I +LSAC H+GLVE+G+
Sbjct: 329 PQTNYIAWNAVIGGLAMHGKAKEVLDCFSRMERSGVSPSDVTYIAILSACSHAGLVEKGR 388
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F +MV + L P++ HY CMVDLLGRAGYL EA +L+ N+ +++ + C
Sbjct: 389 SFFKDMVNRVGLEPRIEHYGCMVDLLGRAGYLEEAEELIMNMPIRSDDVIWKALLGACKM 448
Query: 770 NPSDKIG----EAMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + +IG E ++ G + LSN+Y + G W+ V + R ++KE ++K GCS
Sbjct: 449 HKNVEIGRRAAEVLMKLAPHDSGAYVALSNLYAASGNWDGVAKVRLMMKEMDIRKDPGCS 508
Query: 938 WIEVGGVVHRFLVEDSSHLESEQIKKI 1018
WIE+ GV+H FLVED SH +++I +
Sbjct: 509 WIEIDGVIHEFLVEDDSHPRAKEINSM 535
Score = 34.3 bits (77), Expect(3) = 5e-61
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLM 210
+ + WN+MI+GY Q G EAI LF M
Sbjct: 229 RSVVSWNSMISGYAQNGFFMEAIDLFRRM 257
Score = 26.2 bits (56), Expect(3) = 5e-61
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 36 NVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
NV+L +ID + + G ++ AR FD + ++++V
Sbjct: 199 NVVLCNVMIDGYVRNGKLDVARGMFDKMHQRSVV 232
>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
[Vitis vinifera]
Length = 731
Score = 218 bits (554), Expect(3) = 6e-61
Identities = 113/267 (42%), Positives = 168/267 (62%), Gaps = 7/267 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V++LS CA GAL+ G+ VH Y+ + +++V+ IL T LVDMY++CG I+ A +F++
Sbjct: 361 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 420
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
++D +WN +I A H G +AL + ++ME G PNDITFIG+L AC H+GLV EGK
Sbjct: 421 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 480
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F MV L P++ HY CMVDLLGRAG L EA ++++++ N + VA C
Sbjct: 481 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 540
Query: 770 NPSDKIGE----AMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + ++GE +L E + G+ +L+SNIY + RW+D R+ +K G+KK G S
Sbjct: 541 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 600
Query: 938 WIEVGGVVHRFLVEDSSHLESEQIKKI 1018
IEV G VH FL+ D SH + +I ++
Sbjct: 601 VIEVNGTVHEFLMGDQSHPQIRRINEM 627
Score = 36.6 bits (83), Expect(3) = 6e-61
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +3
Query: 48 STALIDMHSKCGDVEKARRFFDGISKKNLV 137
+TAL+DM++KCG + AR+ F+G+++K +V
Sbjct: 265 TTALLDMYAKCGHLGLARQLFNGLTQKTVV 294
Score = 29.3 bits (64), Expect(3) = 6e-61
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQN 216
K + W AMI G ++ LEEA LF QN
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQN 321
Score = 63.5 bits (153), Expect = 1e-07
Identities = 38/162 (23%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +2
Query: 248 NVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKTRNK 427
+VL AC + + G+E+H ++ + +D +V + L+ MY C ++ A LVF K +
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 188
Query: 428 DSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGKVQF 607
D W+ MI+SL+ + + AL ++ +M P+++ + +++ + + GK
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 608 TNMVVKHSLSPK--V*HYACMVDLLGRAGYLVEAFKLVQNIS 727
V+++S + V ++D+ + G+L A +L ++
Sbjct: 249 A-YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 289
Score = 38.9 bits (89), Expect(2) = 8e-06
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFF 110
++D + + IL+TAL+DM++KCGD+ A R F
Sbjct: 384 YIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 417
Score = 38.5 bits (88), Expect(2) = 8e-06
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
+ I WNA+ITG+ G EEA+ +F M+ VKPN
Sbjct: 423 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 459
>ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508719081|gb|EOY10978.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 783
Score = 222 bits (565), Expect(2) = 6e-61
Identities = 114/264 (43%), Positives = 170/264 (64%), Gaps = 7/264 (2%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
T+V VLS CA+ GAL+ G+ VH Y+ R +++++IL T L++MY++CG ID A +F ++
Sbjct: 413 TMVTVLSLCAEAGALDMGKWVHTYIDRQVVEMDMILQTALIEMYAKCGDIDGAWRLFRES 472
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+++D +WN M+ H G +AL + S+ME GA PNDITFIG+L AC H+GLV+EG+
Sbjct: 473 KDQDIGMWNTMMAGFGMHGCGKEALELFSEMERVGARPNDITFIGLLHACSHAGLVKEGR 532
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
+ F MV L PKV HY CMVDLLGRAG L EA+++++++ N + +A C
Sbjct: 533 LFFEKMVHDFGLVPKVEHYGCMVDLLGRAGLLDEAYEMIKSMPIRPNTITWSALLAACKL 592
Query: 770 NPSDKIGE----AMLSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAGCS 937
+ + +GE ++ E + G+ + +SNIY RWNDV R+ +K KG+KK G S
Sbjct: 593 HKNTVLGEMAARQLVYLEPQNCGYNVSMSNIYAVANRWNDVAGVRKAMKNKGMKKEPGLS 652
Query: 938 WIEVGGVVHRFLVEDSSHLESEQI 1009
IEV G VH F++ D +H + E+I
Sbjct: 653 SIEVDGYVHEFIMGDKAHPQIEKI 676
Score = 40.4 bits (93), Expect(2) = 6e-61
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 9 FVDVNAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLVL 140
++ N I ++ L+TAL+DM+ KCG + A+ FD + K++++
Sbjct: 335 YISRNGICVSLALATALVDMYGKCGQIRNAKAVFDTVKNKDVMI 378
Score = 99.8 bits (247), Expect(2) = 9e-23
Identities = 48/120 (40%), Positives = 74/120 (61%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TL++++ C +GALE G+++H Y+ RN + V++ LAT LVDMY +CG I +A VF
Sbjct: 312 TLLSLVVECGFVGALELGKQIHAYISRNGICVSLALATALVDMYGKCGQIRNAKAVFDTV 371
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+NKD +W+ MI + A AL + +M +G PN +T + VLS C +G ++ GK
Sbjct: 372 KNKDVMIWSAMIAAYAQAHCIDQALDLFVKMRDSGVRPNQVTMVTVLSLCAEAGALDMGK 431
Score = 35.0 bits (79), Expect(2) = 9e-23
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 124 KKIWCWNAMITGYVQQGLLEEAIQLFHLMQNDFVKPN 234
K I W AMI GY+ LEE +LF M + +KPN
Sbjct: 273 KSIVSWTAMIAGYIHCNKLEEGGKLFARMIEERIKPN 309
Score = 72.4 bits (176), Expect(2) = 6e-14
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = +2
Query: 242 LVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKTR 421
++++++ A+L +E GR +H Y+ RN + V L T +DMY++ G++ A L+F
Sbjct: 212 MISMVNLFAELKDIEMGRAMHAYVTRNLEKMGVHLTTAFIDMYAKSGNLASAGLLFHGLN 271
Query: 422 NKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGKV 601
K W MI H +K + + ++M PN+IT + ++ C G +E GK
Sbjct: 272 QKSIVSWTAMIAGYIHCNKLEEGGKLFARMIEERIKPNEITLLSLVVECGFVGALELGK- 330
Query: 602 QFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEA---FKLVQN 721
Q + ++ + + +VD+ G+ G + A F V+N
Sbjct: 331 QIHAYISRNGICVSLALATALVDMYGKCGQIRNAKAVFDTVKN 373
Score = 32.7 bits (73), Expect(2) = 6e-14
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 21 NAIPSNVILSTALIDMHSKCGDVEKARRFFDGISKKNLV 137
N + +V +S ALI M+S+C AR FD + ++++V
Sbjct: 137 NGLIEDVFVSNALIQMYSECRSAVSARLLFDNMDERDVV 175
Score = 57.4 bits (137), Expect = 1e-05
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 251 VLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKTRNKD 430
+L AC+ + + G+E+H + +N + +V ++ L+ MYS C S A L+F +D
Sbjct: 114 ILKACSFVSMTQLGKEIHGFALKNGLIEDVFVSNALIQMYSECRSAVSARLLFDNMDERD 173
Query: 431 SAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGKVQFT 610
W+ MI+S +AL ++ +M P+++ I +++ +E G+
Sbjct: 174 VVSWSTMIRSYVRSKLYREALDIVRKMHILQVRPSEVAMISMVNLFAELKDIEMGRAM-- 231
Query: 611 NMVVKHSLSPKV*HY-ACMVDLLGRAGYLVEAFKLVQNIS 727
+ V +L H +D+ ++G L A L ++
Sbjct: 232 HAYVTRNLEKMGVHLTTAFIDMYAKSGNLASAGLLFHGLN 271
>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 642
Score = 223 bits (568), Expect(2) = 6e-61
Identities = 115/271 (42%), Positives = 175/271 (64%), Gaps = 9/271 (3%)
Frame = +2
Query: 239 TLVNVLSACADLGALEFGREVHLYLGRNQMDVNVILATDLVDMYSRCGSIDDACLVFVKT 418
TLV+VL A A +GALE G+ +HLY G+N+++++ +L + LVDMYS+CGSID A VF
Sbjct: 272 TLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETL 331
Query: 419 RNKDSAVWNVMIQSLAHHSKGSDALAVLSQMEGNGASPNDITFIGVLSACYHSGLVEEGK 598
+++ W+ +I + A H + DA+ M G +PND+ +IG+LSAC H+GLVEEG+
Sbjct: 332 PKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391
Query: 599 VQFTNMVVKHSLSPKV*HYACMVDLLGRAGYLVEAFKLVQNIST*FNNL---GFVAQCL* 769
F++MV L P++ HY CMVDLLGRAG+L EA +L++N+ +++ + C
Sbjct: 392 SFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKM 451
Query: 770 NPSDKIGEAM------LSDEDSSLGFVILLSNIYKSVGRWNDVVRFRRLVKEKGLKKPAG 931
+ + K+GE + L+ DS G + LSN+Y S+G W V R R +K ++K G
Sbjct: 452 HKNLKMGERVAETLMELAPHDS--GSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPG 509
Query: 932 CSWIEVGGVVHRFLVEDSSHLESEQIKKIKG 1024
CSWIE+ G++H FLVED SH ++++I+ + G
Sbjct: 510 CSWIEIHGIIHEFLVEDDSHSKAKEIQAMLG 540
Score = 39.3 bits (90), Expect(2) = 6e-61
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Frame = +1
Query: 76 NVVMWR-------RQGD-----SLMEFL--KKIWCWNAMITGYVQQGLLEEAIQLFHLMQ 213
NVV+W R GD +L + + + + WN MI+GY Q G EAI LF MQ
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 214 NDFVKPN 234
+ + PN
Sbjct: 263 SSNIDPN 269