BLASTX nr result
ID: Sinomenium21_contig00039513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00039513
(698 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,... 112 9e-23
ref|XP_007038897.1| Tetratricopeptide repeat (TPR)-like superfam... 108 2e-21
ref|XP_007038896.1| Tetratricopeptide repeat (TPR)-like superfam... 108 2e-21
ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, part... 107 3e-21
ref|XP_007219220.1| hypothetical protein PRUPE_ppa017678mg, part... 105 1e-20
gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis] 102 1e-19
gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis] 102 1e-19
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat... 100 4e-19
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera] 100 4e-19
ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat... 100 5e-19
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar... 96 9e-18
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr... 96 9e-18
ref|XP_004509858.1| PREDICTED: putative pentatricopeptide repeat... 96 9e-18
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps... 96 9e-18
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ... 96 9e-18
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
emb|CBI21289.3| unnamed protein product [Vitis vinifera] 96 1e-17
gb|ABK26521.1| unknown [Picea sitchensis] 96 1e-17
gb|AEW07828.1| hypothetical protein 0_12440_01, partial [Pinus r... 95 2e-17
ref|XP_002299387.2| pentatricopeptide repeat-containing family p... 95 3e-17
>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 660
Score = 112 bits (281), Expect = 9e-23
Identities = 53/65 (81%), Positives = 57/65 (87%)
Frame = +3
Query: 3 YHLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRF 182
YHLAVHSEKLA AF IINT+PGT IR+ KNLRVCGDCHVAAK ISKI E EIIIRDT+RF
Sbjct: 587 YHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRF 646
Query: 183 HHFHD 197
HHF +
Sbjct: 647 HHFQE 651
>ref|XP_007038897.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|590673458|ref|XP_007038898.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508776142|gb|EOY23398.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508776143|gb|EOY23399.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 677
Score = 108 bits (269), Expect = 2e-21
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F I+NTEPGT IRI KNLR+CGDCH+AAK IS+I E EII+RDTYRFH
Sbjct: 605 HLAVHSEKLAIVFAILNTEPGTPIRITKNLRICGDCHIAAKLISQIAEREIIVRDTYRFH 664
Query: 186 HFHD 197
HF +
Sbjct: 665 HFQN 668
>ref|XP_007038896.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508776141|gb|EOY23397.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 587
Score = 108 bits (269), Expect = 2e-21
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F I+NTEPGT IRI KNLR+CGDCH+AAK IS+I E EII+RDTYRFH
Sbjct: 283 HLAVHSEKLAIVFAILNTEPGTPIRITKNLRICGDCHIAAKLISQIAEREIIVRDTYRFH 342
Query: 186 HFHD 197
HF +
Sbjct: 343 HFQN 346
>ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, partial [Populus
trichocarpa] gi|550337649|gb|ERP60091.1| hypothetical
protein POPTR_0005s00730g, partial [Populus trichocarpa]
Length = 670
Score = 107 bits (268), Expect = 3e-21
Identities = 50/64 (78%), Positives = 55/64 (85%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F I+NT+PG+TIRI KN+RVCGDCHVA K ISKI E EIIIRDT+RFH
Sbjct: 599 HLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFH 658
Query: 186 HFHD 197
HF D
Sbjct: 659 HFRD 662
>ref|XP_007219220.1| hypothetical protein PRUPE_ppa017678mg, partial [Prunus persica]
gi|462415682|gb|EMJ20419.1| hypothetical protein
PRUPE_ppa017678mg, partial [Prunus persica]
Length = 640
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F I+NT+PGT IRI KNLRVCGDCH+A K ISKI E EI+IRDT RFH
Sbjct: 568 HLAVHSEKLAIVFAILNTDPGTAIRITKNLRVCGDCHIAIKLISKIAEREIVIRDTNRFH 627
Query: 186 HFHD 197
HF D
Sbjct: 628 HFKD 631
>gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis]
Length = 815
Score = 102 bits (254), Expect = 1e-19
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F ++N+EPG IRI KNLRVCGDCH A K ISKI E EI++RDTYRFH
Sbjct: 606 HLAVHSEKLAIVFALLNSEPGAPIRITKNLRVCGDCHTAVKLISKIAEREIVVRDTYRFH 665
Query: 186 HF 191
HF
Sbjct: 666 HF 667
>gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis]
Length = 678
Score = 102 bits (254), Expect = 1e-19
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F ++N+EPG IRI KNLRVCGDCH A K ISKI E EI++RDTYRFH
Sbjct: 606 HLAVHSEKLAIVFALLNSEPGAPIRITKNLRVCGDCHTAVKLISKIAEREIVVRDTYRFH 665
Query: 186 HF 191
HF
Sbjct: 666 HF 667
>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 100 bits (250), Expect = 4e-19
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA AF I+NT PG+ IRI KNLRVCGDCH+AAK ISKI EI IRDT RFH
Sbjct: 606 HLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFH 665
Query: 186 HFHD 197
HF++
Sbjct: 666 HFYN 669
>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 100 bits (250), Expect = 4e-19
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA AF I+NT PG+ IRI KNLRVCGDCH+AAK ISKI EI IRDT RFH
Sbjct: 1595 HLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFH 1654
Query: 186 HFHD 197
HF++
Sbjct: 1655 HFYN 1658
>ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Fragaria vesca subsp. vesca]
Length = 675
Score = 100 bits (249), Expect = 5e-19
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F I+NTE G IRI KNLRVC DCH+AAK ISKI E EI++RDT RFH
Sbjct: 603 HLAVHSEKLAIVFAILNTERGVVIRITKNLRVCSDCHIAAKLISKIAEREIVVRDTNRFH 662
Query: 186 HFHD 197
HF D
Sbjct: 663 HFKD 666
>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 96.3 bits (238), Expect = 9e-18
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3
Query: 18 HSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHHFH 194
HSE+LA AF IINTEPGTTIR+ KN+R+C DCHVA K ISKITE EII+RD RFHHF+
Sbjct: 647 HSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 705
>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
gi|557107185|gb|ESQ47492.1| hypothetical protein
EUTSA_v10020184mg [Eutrema salsugineum]
Length = 694
Score = 96.3 bits (238), Expect = 9e-18
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3
Query: 18 HSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHHFH 194
HSE+LA AF IINTEPGTTIR+ KN+R+C DCHVA K ISKITE EII+RD RFHHF+
Sbjct: 626 HSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 684
>ref|XP_004509858.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like isoform X1 [Cicer arietinum]
gi|502154837|ref|XP_004509859.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g49142-like isoform X2 [Cicer arietinum]
Length = 671
Score = 96.3 bits (238), Expect = 9e-18
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = +3
Query: 6 HLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFH 185
HLAVHSEKLA F ++NT+ + IRI KNLRVCGDCH+AAK ISKI E EII+RDT+RFH
Sbjct: 600 HLAVHSEKLAIVFALLNTQE-SQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTHRFH 658
Query: 186 HFHD 197
HF D
Sbjct: 659 HFKD 662
>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
gi|482565768|gb|EOA29957.1| hypothetical protein
CARUB_v10013060mg [Capsella rubella]
Length = 730
Score = 96.3 bits (238), Expect = 9e-18
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3
Query: 18 HSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHHFH 194
HSE+LA AF IINTEPGTTIR+ KN+R+C DCHVA K ISKITE EII+RD RFHHF+
Sbjct: 662 HSERLAVAFGIINTEPGTTIRVTKNIRICRDCHVAIKFISKITEREIIVRDNSRFHHFN 720
>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329263|gb|EFH59682.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 679
Score = 96.3 bits (238), Expect = 9e-18
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3
Query: 18 HSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHHFH 194
HSE+LA AF IINTEPGTTIR+ KN+R+C DCHVA K ISKITE EII+RD RFHHF+
Sbjct: 611 HSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 669
>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 95.9 bits (237), Expect = 1e-17
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 9 LAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHH 188
L VHSEKLA AF I+NT PGTTI I KNLRVCGDCH A K ISKI + EI++RD+ RFHH
Sbjct: 664 LRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHH 723
Query: 189 FHD 197
F D
Sbjct: 724 FRD 726
>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 95.9 bits (237), Expect = 1e-17
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 9 LAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHH 188
L VHSEKLA AF I+NT PGTTI I KNLRVCGDCH A K ISKI + EI++RD+ RFHH
Sbjct: 510 LRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHH 569
Query: 189 FHD 197
F D
Sbjct: 570 FRD 572
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 95.5 bits (236), Expect = 1e-17
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +3
Query: 9 LAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHH 188
L HSEKLA AF II+T PGTTIR+ KNLRVCGDCH A K IS+I EI++RDT+RFHH
Sbjct: 299 LGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHH 358
Query: 189 FHD 197
F D
Sbjct: 359 FKD 361
>gb|AEW07828.1| hypothetical protein 0_12440_01, partial [Pinus radiata]
gi|383129209|gb|AFG45289.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129210|gb|AFG45290.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129211|gb|AFG45291.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129212|gb|AFG45292.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129213|gb|AFG45293.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129214|gb|AFG45294.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129215|gb|AFG45295.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129216|gb|AFG45296.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129217|gb|AFG45297.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129218|gb|AFG45298.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129219|gb|AFG45299.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129220|gb|AFG45300.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129221|gb|AFG45301.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129222|gb|AFG45302.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129223|gb|AFG45303.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129224|gb|AFG45304.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
gi|383129225|gb|AFG45305.1| hypothetical protein
0_12440_01, partial [Pinus taeda]
Length = 105
Score = 95.1 bits (235), Expect = 2e-17
Identities = 45/65 (69%), Positives = 51/65 (78%)
Frame = +3
Query: 3 YHLAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRF 182
Y L HSEKLA AF +INT PGT+IRI KNLRVC DCH A+K+ISKI EI++RDT RF
Sbjct: 32 YMLLYHSEKLAIAFGLINTPPGTSIRIVKNLRVCDDCHSASKYISKIVSREIVMRDTSRF 91
Query: 183 HHFHD 197
HHF D
Sbjct: 92 HHFKD 96
>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550347073|gb|EEE84192.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 894
Score = 94.7 bits (234), Expect = 3e-17
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 9 LAVHSEKLATAFVIINTEPGTTIRIAKNLRVCGDCHVAAKHISKITECEIIIRDTYRFHH 188
L HSEKLA AF I+NT PGTTIR+AKNLRVC DCH A+K ISKI + EII+RD RFHH
Sbjct: 823 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHH 882
Query: 189 FHD 197
F D
Sbjct: 883 FKD 885