BLASTX nr result

ID: Sinomenium21_contig00039512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00039512
         (585 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007043706.1| C2H2 and C2HC zinc fingers superfamily prote...    73   5e-11
ref|XP_002517845.1| nucleic acid binding protein, putative [Rici...    65   2e-08
ref|XP_006372765.1| zinc finger family protein [Populus trichoca...    62   9e-08
ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [...    61   3e-07
emb|CBI21907.3| unnamed protein product [Vitis vinifera]               61   3e-07
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]    61   3e-07
ref|XP_006380280.1| hypothetical protein POPTR_0007s01380g [Popu...    59   1e-06
ref|XP_006469076.1| PREDICTED: zinc finger protein MAGPIE-like [...    57   3e-06
ref|XP_006446712.1| hypothetical protein CICLE_v10015043mg [Citr...    57   3e-06
ref|XP_006348832.1| PREDICTED: zinc finger protein MAGPIE-like [...    57   5e-06

>ref|XP_007043706.1| C2H2 and C2HC zinc fingers superfamily protein [Theobroma cacao]
           gi|508707641|gb|EOX99537.1| C2H2 and C2HC zinc fingers
           superfamily protein [Theobroma cacao]
          Length = 458

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 51/102 (50%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
 Frame = +3

Query: 15  TSTDPMFYGCL-------KGQGRNKYNALFGPNPTLITSLRTDQNQISSASDLSVLNQQI 173
           TSTD  F G         + Q  NKY+ L+G N T  T+L +D    +SA+D+S LNQ +
Sbjct: 362 TSTDTSFLGSFATKCSSSQVQDGNKYSGLYGSN-TPATTLGSDLE--NSANDISTLNQ-L 417

Query: 174 LMPPTKLQKTQKDDEIGEQTRDFLGVGSVQAIC-SSSINGWM 296
            M P K + TQ +D  G QTRDFLGVG VQAIC  SSINGW+
Sbjct: 418 QMYPAKRRHTQNEDSTGGQTRDFLGVG-VQAICHPSSINGWI 458


>ref|XP_002517845.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223542827|gb|EEF44363.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 437

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 26/120 (21%)
 Frame = +3

Query: 15  TSTDPMFYGC-----------LKGQGRNKYNAL-FGPNPTLITSLRTDQNQISSASDLSV 158
           TSTDP F G            ++ QG NK+  L +G NPT+   + +D   + + +D+S 
Sbjct: 320 TSTDPTFLGSFGLKSSTNNSQVQDQGSNKFCGLIYGSNPTITNIIASDH--VENNNDISR 377

Query: 159 LNQ-QILMPPTKLQKTQK------DDE------IGEQTRDFLGVGSVQAIC-SSSINGWM 296
           LNQ Q+ MP   + K QK      D +      +G QTRDFLGVG  QAIC  +SINGW+
Sbjct: 378 LNQLQMYMPSGPVAKRQKLHSHDHDQDTSAAAAVGGQTRDFLGVGVQQAICHPTSINGWI 437


>ref|XP_006372765.1| zinc finger family protein [Populus trichocarpa]
           gi|550319413|gb|ERP50562.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 475

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
 Frame = +3

Query: 15  TSTDPMFYGCL-------KGQGRNKYNALFGPNPTLITSLRTDQNQISSASDLSVLNQQI 173
           TSTDP F G         K Q  NK+  L+G +P         +N  S +  +S LNQ  
Sbjct: 376 TSTDPSFLGSFALKSNAKKVQDGNKFCGLYGSSPVSTNPASDVEN--SGSDQISSLNQLQ 433

Query: 174 LMPPT-KLQKTQKDDEIGEQTRDFLGVGSVQAIC-SSSINGWM 296
           + P   K+ ++ +D   G QTRDFLGVG VQAIC  SSINGW+
Sbjct: 434 MYPKRQKIFQSDQDSPAGGQTRDFLGVG-VQAICHPSSINGWI 475


>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
          Length = 450

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 99  LITSLRTDQNQISSASDLSVLNQQILMPPTKLQKTQKDDEIGEQTRDFLGVGSVQAIC-S 275
           L T+ +   N + +  DLS  NQ + M P K + TQ DD  G QTRDFLGVG VQ IC  
Sbjct: 386 LYTANQLPTNDMENPKDLSTFNQ-LQMYPAKRRNTQNDDSTGGQTRDFLGVG-VQTICHP 443

Query: 276 SSINGWM 296
           SSINGWM
Sbjct: 444 SSINGWM 450


>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 99  LITSLRTDQNQISSASDLSVLNQQILMPPTKLQKTQKDDEIGEQTRDFLGVGSVQAIC-S 275
           L T+ +   N + +  DLS  NQ + M P K + TQ DD  G QTRDFLGVG VQ IC  
Sbjct: 363 LYTANQLPTNDMENPKDLSTFNQ-LQMYPAKRRNTQNDDSTGGQTRDFLGVG-VQTICHP 420

Query: 276 SSINGWM 296
           SSINGWM
Sbjct: 421 SSINGWM 427


>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
          Length = 403

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 99  LITSLRTDQNQISSASDLSVLNQQILMPPTKLQKTQKDDEIGEQTRDFLGVGSVQAIC-S 275
           L T+ +   N + +  DLS  NQ + M P K + TQ DD  G QTRDFLGVG VQ IC  
Sbjct: 339 LYTANQLPTNDMENPKDLSTFNQ-LQMYPAKRRNTQNDDSTGGQTRDFLGVG-VQTICHP 396

Query: 276 SSINGWM 296
           SSINGWM
Sbjct: 397 SSINGWM 403


>ref|XP_006380280.1| hypothetical protein POPTR_0007s01380g [Populus trichocarpa]
           gi|550333887|gb|ERP58077.1| hypothetical protein
           POPTR_0007s01380g [Populus trichocarpa]
          Length = 477

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
 Frame = +3

Query: 15  TSTDPMFYGCL-------KGQ-GRNKYNALFGPNPTLITSLRTDQNQISSASDLSVLNQQ 170
           TSTDP F G         K Q G NK+  L+G +P  I++      + S   ++  LNQ 
Sbjct: 376 TSTDPSFLGSFGLKSFSTKAQDGNNKFCGLYGSSP--ISTNPASDMENSGNDEIPTLNQ- 432

Query: 171 ILMPPTKLQK---TQKDDEIGEQTRDFLGVGSVQAIC-SSSINGWM 296
           + M   K QK   + +D   G QTRDFLGVG VQAIC  SSINGW+
Sbjct: 433 LQMYSAKRQKIFQSDQDSPAGGQTRDFLGVG-VQAICHPSSINGWI 477


>ref|XP_006469076.1| PREDICTED: zinc finger protein MAGPIE-like [Citrus sinensis]
          Length = 488

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 46/110 (41%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
 Frame = +3

Query: 12  TTSTDP-MFYGCL---------KGQGRNKYNALFGPNPTLITSLRTDQNQISSASDLSVL 161
           + STDP +F G L         + Q  NKY  L   +  +      +  +ISSASD+S L
Sbjct: 380 SASTDPSLFLGSLGFKCSSNINQVQDGNKYCGLMYCSNAITDRHLGNDVEISSASDISSL 439

Query: 162 NQQILMPPTKLQKTQKD---DEIGEQTRDFLGVGSVQAIC--SSSINGWM 296
           +Q  + PP K +  Q D   +  G QTRDFLGVG VQAI    SSINGW+
Sbjct: 440 SQLQMPPPAKRRHLQSDRQAESAGGQTRDFLGVG-VQAISCHPSSINGWI 488


>ref|XP_006446712.1| hypothetical protein CICLE_v10015043mg [Citrus clementina]
           gi|557549323|gb|ESR59952.1| hypothetical protein
           CICLE_v10015043mg [Citrus clementina]
          Length = 488

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 46/110 (41%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
 Frame = +3

Query: 12  TTSTDP-MFYGCL---------KGQGRNKYNALFGPNPTLITSLRTDQNQISSASDLSVL 161
           + STDP +F G L         + Q  NKY  L   +  +      +  +ISSASD+S L
Sbjct: 380 SASTDPSLFLGSLGFKCSSNINQVQDGNKYCGLMYCSNAIADRHLGNDVEISSASDISSL 439

Query: 162 NQQILMPPTKLQKTQKD---DEIGEQTRDFLGVGSVQAIC--SSSINGWM 296
           +Q  + PP K +  Q D   +  G QTRDFLGVG VQAI    SSINGW+
Sbjct: 440 SQLQMPPPAKRRHLQSDRQAESAGGQTRDFLGVG-VQAISCHPSSINGWI 488


>ref|XP_006348832.1| PREDICTED: zinc finger protein MAGPIE-like [Solanum tuberosum]
          Length = 447

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
 Frame = +3

Query: 9   STTSTDPMFY-------GCLKGQGR----NKYNALFGPNPT----LITSLRTDQNQISSA 143
           +TT+TDP  +        C   +      NK+   +   PT    + TSL +D +Q SS 
Sbjct: 325 TTTATDPSIFLGNFTMNNCNNNKNNDNDNNKFCGFYVSTPTTNNSISTSLGSDVDQSSSV 384

Query: 144 SDLSVLNQQILM-PPTKLQKTQKDDEI-----------GEQTRDFLGVGSVQAIC-SSSI 284
           +D S     I M PP+K +  Q +D +           G QTRDFLGVG VQ+IC  SSI
Sbjct: 385 NDFSATIHPIQMYPPSKRRHIQIEDSVKGVGGGAGSGAGGQTRDFLGVG-VQSICHPSSI 443

Query: 285 NGWM 296
           NGW+
Sbjct: 444 NGWI 447


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