BLASTX nr result
ID: Sinomenium21_contig00039320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00039320
(407 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 70 4e-10
emb|CBI27579.3| unnamed protein product [Vitis vinifera] 70 4e-10
emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera] 70 4e-10
ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutr... 61 3e-09
ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 66 6e-09
ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 66 6e-09
gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [... 60 7e-09
ref|NP_564296.1| RNA helicase family protein [Arabidopsis thalia... 60 7e-09
gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus... 65 8e-09
ref|XP_006580114.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 65 1e-08
ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 65 1e-08
ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Caps... 59 2e-08
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor... 64 2e-08
ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citr... 64 2e-08
ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citr... 64 2e-08
ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citr... 64 2e-08
ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theob... 64 2e-08
ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theob... 64 2e-08
ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theob... 64 2e-08
ref|XP_007158704.1| hypothetical protein PHAVU_002G175400g [Phas... 64 3e-08
>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
Length = 700
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV + LKVLITS+TLDG KVSRFF NCP+LTVP KLFPV
Sbjct: 136 LLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLFPV 184
>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV + LKVLITS+TLDG KVSRFF NCP+LTVP KLFPV
Sbjct: 136 LLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLFPV 184
>emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]
Length = 2336
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV + LKVLITS+TLDG KVSRFF NCP+LTVP KLFPV
Sbjct: 180 LLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLFPV 228
>ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutrema salsugineum]
gi|557093491|gb|ESQ34073.1| hypothetical protein
EUTSA_v10006961mg [Eutrema salsugineum]
Length = 703
Score = 61.2 bits (147), Expect(2) = 3e-09
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV I KVLITS+TLDG KVS FF CPVL VP KL+PV
Sbjct: 136 LLGLMKRLVRIRSSNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPV 184
Score = 25.4 bits (54), Expect(2) = 3e-09
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 163 SMTTSMLDDFSVSLLNVTVHQGEINSLSAIDSDILLG 273
S++ MLDD+SV +L+ H+ +N +DILLG
Sbjct: 109 SLSNPMLDDYSVIILD-EAHERSLN------TDILLG 138
>ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X1 [Solanum
tuberosum]
Length = 700
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNICPI-LKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRL+ LKVLITS+TLDGGKVSRFF +CPVLTVP +LFPV
Sbjct: 136 LLGLMKRLIKWRHSNLKVLITSATLDGGKVSRFFSDCPVLTVPGELFPV 184
>ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Solanum
lycopersicum]
Length = 700
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNICPI-LKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRL+ LKVLITS+TLDGGKVSRFF +CPVLTVP +LFPV
Sbjct: 136 LLGLMKRLIKWRHSNLKVLITSATLDGGKVSRFFSDCPVLTVPGELFPV 184
>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
Length = 708
Score = 60.1 bits (144), Expect(2) = 7e-09
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLV I KVLITS+TLDG KVS FF CPVL VP KL+PV
Sbjct: 136 LLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPV 184
Score = 25.4 bits (54), Expect(2) = 7e-09
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 163 SMTTSMLDDFSVSLLNVTVHQGEINSLSAIDSDILLG 273
S++ MLDD+SV +L+ H+ +N +DILLG
Sbjct: 109 SLSNPMLDDYSVIILD-EAHERSLN------TDILLG 138
>ref|NP_564296.1| RNA helicase family protein [Arabidopsis thaliana]
gi|15451224|gb|AAK96883.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|332192768|gb|AEE30889.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 700
Score = 60.1 bits (144), Expect(2) = 7e-09
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLV I KVLITS+TLDG KVS FF CPVL VP KL+PV
Sbjct: 136 LLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPV 184
Score = 25.4 bits (54), Expect(2) = 7e-09
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 163 SMTTSMLDDFSVSLLNVTVHQGEINSLSAIDSDILLG 273
S++ MLDD+SV +L+ H+ +N +DILLG
Sbjct: 109 SLSNPMLDDYSVIILD-EAHERSLN------TDILLG 138
>gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus guttatus]
Length = 654
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/49 (69%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV + LKVLITS+TLDG KVSRFF +CP+L VP KLFPV
Sbjct: 136 LLGLMKRLVKLRASNLKVLITSATLDGEKVSRFFSDCPILNVPGKLFPV 184
>ref|XP_006580114.1| PREDICTED: ATP-dependent RNA helicase dhx8-like isoform X2 [Glycine
max]
Length = 697
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLM+RLVNI LKVLITS+TLDG KVS+FF +CPVL VP KL+PV
Sbjct: 133 LMGLMRRLVNIRSSDLKVLITSATLDGEKVSKFFADCPVLNVPGKLYPV 181
>ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-like isoform X1 [Glycine
max]
Length = 696
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLM+RLVNI LKVLITS+TLDG KVS+FF +CPVL VP KL+PV
Sbjct: 133 LMGLMRRLVNIRSSDLKVLITSATLDGEKVSKFFADCPVLNVPGKLYPV 181
>ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Capsella rubella]
gi|482575617|gb|EOA39804.1| hypothetical protein
CARUB_v10008467mg [Capsella rubella]
Length = 699
Score = 58.9 bits (141), Expect(2) = 2e-08
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNICPI-LKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLV I KVLITS+TLDG KVS FF CPVL VP KL+PV
Sbjct: 136 LLGLVKRLVRIRRSNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPV 184
Score = 25.4 bits (54), Expect(2) = 2e-08
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 163 SMTTSMLDDFSVSLLNVTVHQGEINSLSAIDSDILLG 273
S++ MLDD+SV +L+ H+ +N +DILLG
Sbjct: 109 SLSNPMLDDYSVIILD-EAHERSLN------TDILLG 138
>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
Length = 704
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLVN+ LK+LITS+TLDG KVS+FF NCP L VP KL+PV
Sbjct: 136 LLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
>ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540284|gb|ESR51328.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 524
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLVN+ LK+LITS+TLDG KVS+FF NCP L VP KL+PV
Sbjct: 136 LLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
>ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540283|gb|ESR51327.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 550
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLVN+ LK+LITS+TLDG KVS+FF NCP L VP KL+PV
Sbjct: 136 LLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
>ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|567891137|ref|XP_006438089.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540282|gb|ESR51326.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540285|gb|ESR51329.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 704
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GL+KRLVN+ LK+LITS+TLDG KVS+FF NCP L VP KL+PV
Sbjct: 136 LLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
>ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theobroma cacao]
gi|508708963|gb|EOY00860.1| RNA helicase family protein
isoform 4 [Theobroma cacao]
Length = 650
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/49 (69%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV LKVLITS+TLDG KVS+FF +CP+LTVP KLFPV
Sbjct: 136 LLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFPV 184
>ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theobroma cacao]
gi|508708962|gb|EOY00859.1| RNA helicase family protein
isoform 3 [Theobroma cacao]
Length = 692
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/49 (69%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV LKVLITS+TLDG KVS+FF +CP+LTVP KLFPV
Sbjct: 136 LLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFPV 184
>ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|590695923|ref|XP_007045026.1| RNA helicase family
protein isoform 1 [Theobroma cacao]
gi|508708960|gb|EOY00857.1| RNA helicase family protein
isoform 1 [Theobroma cacao] gi|508708961|gb|EOY00858.1|
RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 700
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/49 (69%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV LKVLITS+TLDG KVS+FF +CP+LTVP KLFPV
Sbjct: 136 LLGLMKRLVGSRASNLKVLITSATLDGEKVSKFFSDCPLLTVPGKLFPV 184
>ref|XP_007158704.1| hypothetical protein PHAVU_002G175400g [Phaseolus vulgaris]
gi|561032119|gb|ESW30698.1| hypothetical protein
PHAVU_002G175400g [Phaseolus vulgaris]
Length = 696
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 ITGLMKRLVNI-CPILKVLITSSTLDGGKVSRFFPNCPVLTVPEKLFPV 407
+ GLMKRLV + LKVLITS+TLDG KVS+FF +CPVL +P KL+PV
Sbjct: 133 LMGLMKRLVKVRSSDLKVLITSATLDGDKVSKFFADCPVLNIPGKLYPV 181