BLASTX nr result

ID: Sinomenium21_contig00039230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00039230
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290142.1| PREDICTED: UPF0361 protein C3orf37 homolog i...    59   9e-07
ref|XP_004290141.1| PREDICTED: UPF0361 protein C3orf37 homolog i...    59   9e-07

>ref|XP_004290142.1| PREDICTED: UPF0361 protein C3orf37 homolog isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 348

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
 Frame = +2

Query: 56  EEDHSKFPGIEEGS----ENPELAVSSSFQGEAEKCGTKRDHE--LAQDSPYINSTEKLS 217
           EE  +K   ++  S    E+ + +VS   Q +A K  TKRD+E  LA   P  N ++K S
Sbjct: 261 EEPETKEEKVQPSSTVKCEDSKSSVSILSQEDASKEQTKRDYEEFLADSKPLPNESDKKS 320

Query: 218 MSAVKKKKGNLKNAGDNQPTLFSYFGKS 301
            ++  KKK NLK + D QPTLFSYF KS
Sbjct: 321 SASPAKKKVNLKTSHDKQPTLFSYFRKS 348


>ref|XP_004290141.1| PREDICTED: UPF0361 protein C3orf37 homolog isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 366

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
 Frame = +2

Query: 56  EEDHSKFPGIEEGS----ENPELAVSSSFQGEAEKCGTKRDHE--LAQDSPYINSTEKLS 217
           EE  +K   ++  S    E+ + +VS   Q +A K  TKRD+E  LA   P  N ++K S
Sbjct: 279 EEPETKEEKVQPSSTVKCEDSKSSVSILSQEDASKEQTKRDYEEFLADSKPLPNESDKKS 338

Query: 218 MSAVKKKKGNLKNAGDNQPTLFSYFGKS 301
            ++  KKK NLK + D QPTLFSYF KS
Sbjct: 339 SASPAKKKVNLKTSHDKQPTLFSYFRKS 366


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