BLASTX nr result
ID: Sinomenium21_contig00039221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00039221
(313 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera] 91 1e-25
ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containi... 88 8e-25
gb|EYU37731.1| hypothetical protein MIMGU_mgv1a017991mg, partial... 75 9e-19
ref|XP_004233761.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-17
ref|XP_004958445.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-12
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 58 7e-11
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 57 7e-11
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,... 56 7e-11
gb|AEP33770.1| organelle transcript processing 82, partial [Raph... 55 2e-10
gb|AEP33771.1| organelle transcript processing 82, partial [Thla... 56 2e-10
ref|XP_006341663.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
gb|AEP33764.1| organelle transcript processing 82, partial [Iber... 55 4e-10
ref|XP_004235725.1| PREDICTED: pentatricopeptide repeat-containi... 56 5e-10
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam... 56 7e-10
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,... 58 1e-09
ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar... 55 1e-09
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 54 1e-09
ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein... 59 1e-09
ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Sela... 63 2e-09
ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selag... 63 2e-09
>emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 91.3 bits (225), Expect(2) = 1e-25
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
ITSGL N FLSN+LMN+Y C L QIF PCKNVVSWTILISG K+D ++EA
Sbjct: 48 ITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAI 107
Query: 182 EVFRKMVISGFK 217
+VFR+M + FK
Sbjct: 108 DVFREMTMGNFK 119
Score = 51.2 bits (121), Expect(2) = 1e-25
Identities = 22/30 (73%), Positives = 28/30 (93%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFLIR 305
NAVT++SVLPAFANLGLI+I +S+HCF +R
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKSVHCFWVR 150
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
+ G N+F+ L++ Y+ + V Q+F+ + +NVVSW ++SG++ H EA
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAI 208
Query: 182 EVFRKMVISGFKCGYF 229
++F M G ++
Sbjct: 209 DLFNLMRRKGLLVDFY 224
Score = 28.9 bits (63), Expect(2) = 2e-06
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 225 TLTSVLPAFANLGLIKIGRSLHCFLIR 305
T+ S++PA ++G +++G +H F+IR
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIR 251
>ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product
[Vitis vinifera]
Length = 697
Score = 88.2 bits (217), Expect(2) = 8e-25
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
ITSGL N FLSN+LMN+Y C L QIF P KNVVSWTILISG K+D ++EA
Sbjct: 48 ITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAI 107
Query: 182 EVFRKMVISGFK 217
+VFR+M++ FK
Sbjct: 108 DVFREMIMGNFK 119
Score = 51.2 bits (121), Expect(2) = 8e-25
Identities = 22/30 (73%), Positives = 28/30 (93%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFLIR 305
NAVT++SVLPAFANLGLI+I +S+HCF +R
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKSVHCFWVR 150
Score = 47.0 bits (110), Expect(2) = 5e-06
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
+ G N+F+ L++ Y+ + V Q+F+ + +NVV+W ++SG++ H EA
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208
Query: 182 EVFRKMVISGFKCGYF 229
++F M G ++
Sbjct: 209 DLFNLMRRKGLLVDFY 224
Score = 28.9 bits (63), Expect(2) = 5e-06
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 225 TLTSVLPAFANLGLIKIGRSLHCFLIR 305
T+ S++PA ++G +++G +H F+IR
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIR 251
>gb|EYU37731.1| hypothetical protein MIMGU_mgv1a017991mg, partial [Mimulus
guttatus]
Length = 573
Score = 74.7 bits (182), Expect(2) = 9e-19
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +2
Query: 8 SGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEV 187
S L+DN+FL N LMN+YASC + IF I KN+VSWTIL+SG TK+ + EA E+
Sbjct: 17 SNLSDNVFLGNRLMNAYASCGLIDQAQIIFSHISNKNLVSWTILVSGLTKNGRFSEAIEL 76
Query: 188 FRKMVI 205
F++MV+
Sbjct: 77 FQEMVV 82
Score = 44.3 bits (103), Expect(2) = 9e-19
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFLIRHS 311
N VT+ +VLPAF LG+ IG+S+HC+ IRH+
Sbjct: 88 NEVTIATVLPAFGKLGVALIGKSVHCYWIRHN 119
>ref|XP_004233761.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Solanum lycopersicum]
Length = 707
Score = 77.4 bits (189), Expect(2) = 1e-17
Identities = 39/70 (55%), Positives = 50/70 (71%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
+ SGL+ + L N LMNSYASC+ +T +IF I KN+VSWTILI+GF K+ L+LEA
Sbjct: 59 VISGLSQDTRLCNRLMNSYASCRLITQTHKIFSVIEHKNLVSWTILINGFAKNGLFLEAI 118
Query: 182 EVFRKMVISG 211
E+F KMV G
Sbjct: 119 ELFGKMVNCG 128
Score = 37.7 bits (86), Expect(2) = 1e-17
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFLIR 305
NA+T++S+LPA L L IG+SLHC+ ++
Sbjct: 132 NAITVSSILPAIGKLRLNLIGKSLHCYWVK 161
>ref|XP_004958445.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like isoform X1 [Setaria italica]
Length = 509
Score = 60.8 bits (146), Expect(2) = 4e-12
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
+ G+ D+ +SN L++ Y C +L + +F I CK+VVSW+ +I+G +++ +Y +
Sbjct: 314 VRCGVGDDTRVSNALVDMYCKCAYLDMAASLFWSIDCKDVVSWSTIIAGHSQNGMYCSSV 373
Query: 182 EVFRKMVISGFK 217
++F +MV SG K
Sbjct: 374 KLFTEMVSSGVK 385
Score = 35.8 bits (81), Expect(2) = 4e-12
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLHCFLIRH 308
V N+ TL ++LP+ + L L + G+++HCF +R+
Sbjct: 384 VKPNSTTLATILPSLSELKLSRYGKAIHCFSVRN 417
>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
[Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
chloroplast RNA editing factor [Arabidopsis thaliana]
Length = 741
Score = 58.2 bits (139), Expect(2) = 7e-11
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G N+ + N L++ Y+ C L +F+R+P K+V+SW LI G+T +LY EA +F
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 191 RKMVISG 211
++M+ SG
Sbjct: 356 QEMLRSG 362
Score = 34.3 bits (77), Expect(2) = 7e-11
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFL 299
N VT+ S+LPA A+LG I IGR +H ++
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYI 393
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 57.0 bits (136), Expect(2) = 7e-11
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
GL NI L N L++ Y C L +F++I KNVVSW ++I G+T Y EA +F
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLF 350
Query: 191 RKMVIS 208
R+M+ S
Sbjct: 351 RRMMQS 356
Score = 35.4 bits (80), Expect(2) = 7e-11
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLHCFL 299
+D N VT S+LPA ANLG + +G+ +H ++
Sbjct: 358 IDPNDVTFLSILPACANLGALDLGKWVHAYV 388
>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 56.2 bits (134), Expect(2) = 7e-11
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
GL NI + N L++ YA C L + +F+ I KNV+SW ++I G+T Y EA +F
Sbjct: 286 GLESNIKVMNALIDMYAKCGDLENALHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLF 345
Query: 191 RKMVIS 208
R+M+ S
Sbjct: 346 RQMLQS 351
Score = 36.2 bits (82), Expect(2) = 7e-11
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLHCFL 299
V+ N VTL S+LPA ANLG + +G+ +H ++
Sbjct: 353 VEPNDVTLLSILPACANLGALGLGKWIHAYI 383
>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G + ++ + N L++ Y+ C + +F+ + CK+VVSW LI G+T +LY EA +F
Sbjct: 230 GFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLF 289
Query: 191 RKMVISGFKCGYFNECP 241
++M+ SG ECP
Sbjct: 290 QEMLRSG-------ECP 299
Score = 35.4 bits (80), Expect(2) = 2e-10
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFL 299
N VTL SVLPA A+LG I IGR +H ++
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYI 327
>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G N+ + N L++ Y+ C + +F+ + CK+VVSW LI G+T +LY EA +F
Sbjct: 228 GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 287
Query: 191 RKMVISG 211
++M+ SG
Sbjct: 288 QEMLRSG 294
Score = 34.7 bits (78), Expect(2) = 2e-10
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFL 299
N VT+ S+LPA A+LG I IGR +H ++
Sbjct: 298 NDVTIVSILPACAHLGAIDIGRWIHVYI 325
>ref|XP_006341663.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Solanum tuberosum]
Length = 876
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
GL + +SNTL++ Y+ C + ++IF RIP KNV+SWT +I G ++ LEA F
Sbjct: 431 GLIAYVIVSNTLIDLYSKCNCIDKALEIFHRIPDKNVISWTSIILGLRINNRSLEALIFF 490
Query: 191 RKM 199
R+M
Sbjct: 491 REM 493
Score = 33.5 bits (75), Expect(2) = 4e-10
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 210 DSNAVTLTSVLPAFANLGLIKIGRSLHCFLIRH 308
D N+VTL SVL A + +G + G+ +H +++R+
Sbjct: 498 DPNSVTLMSVLSACSRIGALMCGKEIHAYVLRN 530
>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 55.5 bits (132), Expect(2) = 4e-10
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G N+ + N L++ Y+ C L +F+ +P K+V+SW LI G+T +LY EA +F
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312
Query: 191 RKMVISG 211
++M+ SG
Sbjct: 313 QEMLRSG 319
Score = 34.3 bits (77), Expect(2) = 4e-10
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFL 299
N VT+ S+LPA A+LG I IGR +H ++
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYI 350
>ref|XP_004235725.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Solanum lycopersicum]
Length = 876
Score = 55.8 bits (133), Expect(2) = 5e-10
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
GL + +SNTL++ ++ C + ++IF RIP KNV+SWT +I G ++ LEA F
Sbjct: 431 GLIAYVIVSNTLIDLFSKCNCIDKALEIFHRIPDKNVISWTSIILGLRINNRSLEALNFF 490
Query: 191 RKM 199
R+M
Sbjct: 491 REM 493
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 210 DSNAVTLTSVLPAFANLGLIKIGRSLHCFLIRH 308
D N+VTL SVL A + +G + G+ +H +++R+
Sbjct: 498 DPNSVTLMSVLSACSRIGALMCGKEIHAYVLRN 530
>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508783730|gb|EOY30986.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 847
Score = 55.8 bits (133), Expect(2) = 7e-10
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
GL NI L+N L++ Y+ C L +F+ + ++V+SW ++I G+T Y EA +F
Sbjct: 350 GLGSNIHLANALIDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLF 409
Query: 191 RKMVISGFK 217
R+M+ S +
Sbjct: 410 RRMLRSNIE 418
Score = 33.1 bits (74), Expect(2) = 7e-10
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLHCFL 299
++ + VT SVLPA ANLG + +G+ +H ++
Sbjct: 417 IEPSDVTFLSVLPACANLGALDLGKWIHAYI 447
>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
I GL+D + L NT+++ Y C + V+IF+ I CK+VVSWT +IS + + L +A
Sbjct: 389 IRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKAL 447
Query: 182 EVFRKMVISGFKCGY 226
EVF M +G + Y
Sbjct: 448 EVFSSMKETGLEPDY 462
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLHCFLIR 305
++ + VTL S+L A +L +K G+ +H F+IR
Sbjct: 458 LEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIR 490
>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
thaliana] gi|29824355|gb|AAP04138.1| unknown protein
[Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 882
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G ++F+ N L++ Y+ LT Q+F +P +++VSW LISG++ H Y EA E++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 191 RKM 199
++
Sbjct: 196 HEL 198
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFLIR 305
++ T++SVLPAF NL ++K G+ LH F ++
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338275|gb|EFH68692.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 53.5 bits (127), Expect(2) = 1e-09
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +2
Query: 11 GLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVF 190
G N+ + N+LM+ Y+ C L +F+ + K+V+SW LI G+T +LY EA +F
Sbjct: 296 GFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 191 RKMVISG 211
++M+ SG
Sbjct: 356 QEMLRSG 362
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 216 NAVTLTSVLPAFANLGLIKIGRSLHCFL 299
N VT+ S+LPA A+LG I IGR +H ++
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYI 393
>ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508716338|gb|EOY08235.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 693
Score = 59.3 bits (142), Expect(2) = 1e-09
Identities = 27/70 (38%), Positives = 47/70 (67%)
Frame = +2
Query: 2 ITSGLADNIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAF 181
I+SG FL+N L+N Y+ C L +++F+++ +N+VSWT +++GF+++ YLEA
Sbjct: 44 ISSGYRLCTFLTNHLLNMYSKCGQLDYSIKLFEKMSQRNLVSWTAMVTGFSQNLYYLEAI 103
Query: 182 EVFRKMVISG 211
F +M I+G
Sbjct: 104 TTFSQMRIAG 113
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +3
Query: 231 TSVLPAFANLGLIKIGRSLHCFLIR 305
+SV+ A A++GL++ G+ +HC ++
Sbjct: 122 SSVIKACASVGLVQFGKQMHCLALK 146
>ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein
SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 62.8 bits (151), Expect(2) = 2e-09
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +2
Query: 23 NIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVFRKMV 202
++ L N L+ YA CK L +IFQR+P ++VVSW+ +I+ F + DL+ EA E + KM
Sbjct: 255 DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ 314
Query: 203 ISGFKCGYF 229
+ G + Y+
Sbjct: 315 LEGVRPNYY 323
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLH 290
V N T SVL A A++G ++ GR++H
Sbjct: 318 VRPNYYTFASVLLACASVGDLRAGRAVH 345
>ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein
SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 62.8 bits (151), Expect(2) = 2e-09
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +2
Query: 23 NIFLSNTLMNSYASCKFLTVVVQIFQRIPCKNVVSWTILISGFTKHDLYLEAFEVFRKMV 202
++ L N L+ YA CK L +IFQR+P ++VVSW+ +I+ F + DL+ EA E + KM
Sbjct: 254 DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ 313
Query: 203 ISGFKCGYF 229
+ G + Y+
Sbjct: 314 LEGVRPNYY 322
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 207 VDSNAVTLTSVLPAFANLGLIKIGRSLH 290
V N T SVL A A++G ++ GR++H
Sbjct: 317 VRPNYYTFASVLLACASVGDLRAGRAVH 344