BLASTX nr result
ID: Sinomenium21_contig00039184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00039184
(431 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007013371.1| Zinc finger family protein, putative isoform... 195 5e-48
ref|XP_007202316.1| hypothetical protein PRUPE_ppa008076mg [Prun... 187 1e-45
ref|XP_002313732.1| zinc finger family protein [Populus trichoca... 186 4e-45
emb|CBI28167.3| unnamed protein product [Vitis vinifera] 185 5e-45
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin... 185 5e-45
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm... 183 2e-44
ref|XP_006450980.1| hypothetical protein CICLE_v10008851mg [Citr... 183 2e-44
ref|XP_002305494.2| hypothetical protein POPTR_0004s17670g [Popu... 179 3e-43
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin... 177 2e-42
ref|XP_007154979.1| hypothetical protein PHAVU_003G162600g [Phas... 174 9e-42
gb|EXB33953.1| Zinc finger CCCH domain-containing protein 39 [Mo... 173 3e-41
ref|XP_004508522.1| PREDICTED: zinc finger CCCH domain-containin... 169 5e-40
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin... 167 1e-39
ref|XP_006579753.1| PREDICTED: zinc finger CCCH domain-containin... 166 3e-39
ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containin... 166 3e-39
ref|XP_004287352.1| PREDICTED: zinc finger CCCH domain-containin... 162 6e-38
ref|XP_006297872.1| hypothetical protein CARUB_v10013913mg [Caps... 158 6e-37
ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containin... 156 3e-36
ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containin... 155 4e-36
ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arab... 154 2e-35
>ref|XP_007013371.1| Zinc finger family protein, putative isoform 1 [Theobroma cacao]
gi|590577940|ref|XP_007013372.1| Zinc finger family
protein, putative isoform 1 [Theobroma cacao]
gi|508783734|gb|EOY30990.1| Zinc finger family protein,
putative isoform 1 [Theobroma cacao]
gi|508783735|gb|EOY30991.1| Zinc finger family protein,
putative isoform 1 [Theobroma cacao]
Length = 347
Score = 195 bits (496), Expect = 5e-48
Identities = 89/132 (67%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+KLCKKFYNGEECPYG+RCNFLHEDP KFR+D GRFRESS ISIGTTG P + + S
Sbjct: 145 IHRMKLCKKFYNGEECPYGDRCNFLHEDPSKFRDDMGRFRESSAISIGTTGPPGGHGTAS 204
Query: 249 DQADGIGVVNS-GSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGG 73
DQ++G +NS SDA N+KPV+WKT++C KWE TGHCPFGEKCHFAHGQ+ELQ GG
Sbjct: 205 DQSEGNRPLNSASSDAFRGNMKPVYWKTKLCTKWETTGHCPFGEKCHFAHGQSELQGIGG 264
Query: 72 VNEVETGNASIG 37
+ + GN G
Sbjct: 265 RVDGDFGNTCSG 276
>ref|XP_007202316.1| hypothetical protein PRUPE_ppa008076mg [Prunus persica]
gi|462397847|gb|EMJ03515.1| hypothetical protein
PRUPE_ppa008076mg [Prunus persica]
Length = 346
Score = 187 bits (476), Expect = 1e-45
Identities = 86/143 (60%), Positives = 109/143 (76%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+KLCKKFYNGEECPYG+RCNFLHEDP KFR+D RFRE++ ISIGTTG + SGS
Sbjct: 148 IHRMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDISRFRENTAISIGTTGPSVVHGSGS 207
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ ++ +V++G D VN+KPV+WKT++CNKWE TG CPFGEKCHFAHGQAELQ GG
Sbjct: 208 NHSEENRLVSTGMDTFRVNMKPVYWKTKLCNKWETTGKCPFGEKCHFAHGQAELQVPGGR 267
Query: 69 NEVETGNASIGPSKHILNPANET 1
E E +++ +K P N++
Sbjct: 268 VEAEVLSSTPISTKPQAGPVNDS 290
>ref|XP_002313732.1| zinc finger family protein [Populus trichocarpa]
gi|222850140|gb|EEE87687.1| zinc finger family protein
[Populus trichocarpa]
Length = 341
Score = 186 bits (471), Expect = 4e-45
Identities = 88/131 (67%), Positives = 102/131 (77%), Gaps = 3/131 (2%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKKFYNGEECPYG+RCNFLHEDP KFRED+GRFRESS ISIGTTG + SG
Sbjct: 142 IHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGTTGQALGHGSGV 201
Query: 249 DQADGIG--VVNSGSDANWVN-VKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKF 79
A + N+ SDA+ N +KPV+WKT++C KWE+TG CPFGEKCHFAHG AELQ
Sbjct: 202 FNAAEVNRPANNAVSDASRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAP 261
Query: 78 GGVNEVETGNA 46
GG EVE GNA
Sbjct: 262 GGRTEVEAGNA 272
>emb|CBI28167.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 185 bits (470), Expect = 5e-45
Identities = 91/151 (60%), Positives = 106/151 (70%), Gaps = 10/151 (6%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNAS-- 256
I+++KLCKKFYNGEECPYG+RCNFLHEDP KFR+DS R RES ISIGTTG P ++ S
Sbjct: 46 IHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEHGSGS 105
Query: 255 --GSDQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQK 82
GS+ + + +NSG D NVKP +WKT++C KWE TGHCPFGEKCHFAHGQAELQ
Sbjct: 106 NLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQM 165
Query: 81 FGGVN------EVETGNASIGPSKHILNPAN 7
GG E E GN P+K PAN
Sbjct: 166 TGGGGGGGGWAEAEVGNTCSLPAKLPSVPAN 196
>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Vitis vinifera]
Length = 349
Score = 185 bits (470), Expect = 5e-45
Identities = 91/151 (60%), Positives = 106/151 (70%), Gaps = 10/151 (6%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNAS-- 256
I+++KLCKKFYNGEECPYG+RCNFLHEDP KFR+DS R RES ISIGTTG P ++ S
Sbjct: 147 IHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEHGSGS 206
Query: 255 --GSDQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQK 82
GS+ + + +NSG D NVKP +WKT++C KWE TGHCPFGEKCHFAHGQAELQ
Sbjct: 207 NLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQM 266
Query: 81 FGGVN------EVETGNASIGPSKHILNPAN 7
GG E E GN P+K PAN
Sbjct: 267 TGGGGGGGGWAEAEVGNTCSLPAKLPSVPAN 297
>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
gi|223536247|gb|EEF37899.1| conserved hypothetical
protein [Ricinus communis]
Length = 341
Score = 183 bits (465), Expect = 2e-44
Identities = 85/130 (65%), Positives = 100/130 (76%), Gaps = 2/130 (1%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKKFYNGE+CPYG+RCNFLHEDP KFR+D+GRFRESS ISIGTT P + SG
Sbjct: 144 IHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDDAGRFRESSAISIGTTAPPMMHGSGG 203
Query: 249 DQADGIG--VVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFG 76
+ V N+G+DA N+KPV+WKT++C KWE TG CPFGEKCHFAHGQAELQ
Sbjct: 204 LSVVEVNKPVNNAGADAYRGNMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQIPN 263
Query: 75 GVNEVETGNA 46
G E E GNA
Sbjct: 264 GRAEGEVGNA 273
>ref|XP_006450980.1| hypothetical protein CICLE_v10008851mg [Citrus clementina]
gi|568843843|ref|XP_006475808.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X1
[Citrus sinensis] gi|557554206|gb|ESR64220.1|
hypothetical protein CICLE_v10008851mg [Citrus
clementina]
Length = 338
Score = 183 bits (464), Expect = 2e-44
Identities = 90/143 (62%), Positives = 104/143 (72%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKKFYNGEECPYG+RCNFLHEDP KFR+DSGR+RESS ISIGTTG P S S
Sbjct: 152 IHKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCS 211
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+QA+G V S VKPV+WKT++C KW G CPFGEKCHFAHGQ+ELQ GG
Sbjct: 212 NQAEGNRPVGSNC------VKPVYWKTKLCIKWTQ-GQCPFGEKCHFAHGQSELQVIGGR 264
Query: 69 NEVETGNASIGPSKHILNPANET 1
E E GN S K L PAN++
Sbjct: 265 TEGEAGNPSFISVKPQLVPANDS 287
>ref|XP_002305494.2| hypothetical protein POPTR_0004s17670g [Populus trichocarpa]
gi|550341257|gb|EEE86005.2| hypothetical protein
POPTR_0004s17670g [Populus trichocarpa]
Length = 282
Score = 179 bits (455), Expect = 3e-43
Identities = 87/137 (63%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKKFYNGEECPYG+RCNFLHEDP FRED+GRFRESS ISIGTT SG
Sbjct: 84 IHKMKLCKKFYNGEECPYGDRCNFLHEDPANFREDTGRFRESSAISIGTTDHLMGQGSGI 143
Query: 249 DQADGIG--VVNSGSDANWVN-VKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKF 79
A + N+ SDA N +KPV+WKT++C KWEMTG CPFGEKCHFAHG AELQ
Sbjct: 144 FNAAEVNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVP 203
Query: 78 GGVNEVETGNASIGPSK 28
GG EV+ GNA +K
Sbjct: 204 GGRTEVDAGNAGSNVTK 220
>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Cucumis sativus] gi|449520655|ref|XP_004167349.1|
PREDICTED: zinc finger CCCH domain-containing protein
39-like [Cucumis sativus]
Length = 347
Score = 177 bits (448), Expect = 2e-42
Identities = 83/137 (60%), Positives = 102/137 (74%), Gaps = 5/137 (3%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I ++KLC+KFYNGEECPYG+RCNFLHEDP KFR+DSGRFRESS ISIGTTG+P N + S
Sbjct: 149 IQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDS 208
Query: 249 DQADGIGVVNSGSDANWV----NVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQK 82
V S S ++ + NV+P FWKT++C KWE+TGHCPFG+KCHFAHGQ+ELQ
Sbjct: 209 SSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQL 268
Query: 81 F-GGVNEVETGNASIGP 34
+ G EV T ++ P
Sbjct: 269 YIGREGEVSTAALNVKP 285
>ref|XP_007154979.1| hypothetical protein PHAVU_003G162600g [Phaseolus vulgaris]
gi|561028333|gb|ESW26973.1| hypothetical protein
PHAVU_003G162600g [Phaseolus vulgaris]
Length = 344
Score = 174 bits (442), Expect = 9e-42
Identities = 83/162 (51%), Positives = 106/162 (65%), Gaps = 20/162 (12%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I ++KLCKK+YNGEECPYG++C+FLHEDP KFR+DSGR+RES+ ISIGT GSP S
Sbjct: 143 IQKMKLCKKYYNGEECPYGDKCSFLHEDPAKFRDDSGRYRESTAISIGTNGSPKAYGDPS 202
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ + VN+G + + NVK +WKT++C K+E TGHCPFG+ CHFAHGQAELQ GG
Sbjct: 203 NYLESNRAVNTGLNVSRPNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQFPGGR 262
Query: 69 NEVETG--------------------NASIGPSKHILNPANE 4
NE ET +++ P H + PANE
Sbjct: 263 NEAETAGVIPISTKATIPTLPRATPVSSNDAPPSHSVPPANE 304
>gb|EXB33953.1| Zinc finger CCCH domain-containing protein 39 [Morus notabilis]
Length = 341
Score = 173 bits (438), Expect = 3e-41
Identities = 80/115 (69%), Positives = 93/115 (80%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+KLCKKFYNGEECPYG+RCNFLHEDP K+R+DSGRFRESS ISIGT+ SG
Sbjct: 147 IHRMKLCKKFYNGEECPYGDRCNFLHEDPSKYRDDSGRFRESSAISIGTS-----EPSGI 201
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQ 85
+ D V+N+GSD NVKPV+WKT++CNKWE TGHCPFGEKCHFAHG A+ Q
Sbjct: 202 CE-DNKMVLNAGSDPLRGNVKPVYWKTKLCNKWEQTGHCPFGEKCHFAHGLADTQ 255
>ref|XP_004508522.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Cicer arietinum]
gi|502151605|ref|XP_004508523.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X2 [Cicer
arietinum]
Length = 328
Score = 169 bits (427), Expect = 5e-40
Identities = 78/141 (55%), Positives = 94/141 (66%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKKFYNGEECPYG++CNFLHEDP KFR+DS RES+ ISIGT GSP G+
Sbjct: 134 IHKMKLCKKFYNGEECPYGDKCNFLHEDPAKFRDDSRNSRESTTISIGTNGSPKSYGDGT 193
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ DG VN K +WKT++C KWE TGHCPFG+ CHFAHG ELQ FGG
Sbjct: 194 NNLDGNRAVNK-------QTKGTYWKTKLCLKWEHTGHCPFGDDCHFAHGLEELQAFGGR 246
Query: 69 NEVETGNASIGPSKHILNPAN 7
E E A +K I+ P +
Sbjct: 247 VEAEIAGAVANSTKAIIIPTS 267
>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Glycine max]
Length = 347
Score = 167 bits (423), Expect = 1e-39
Identities = 74/129 (57%), Positives = 95/129 (73%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKK+YNGEECPYG++C+FLHEDP +FR+DS R+RES+ ISIGT GSP S
Sbjct: 144 IHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTSISIGTNGSPKSYGDAS 203
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ + VN+G + NVK +WKT++C K+E TGHCPFG+ CHFAHGQAELQ GG
Sbjct: 204 NNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQVPGGR 263
Query: 69 NEVETGNAS 43
E ET +
Sbjct: 264 TEAETAGVN 272
>ref|XP_006579753.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X2 [Glycine max]
Length = 283
Score = 166 bits (420), Expect = 3e-39
Identities = 74/128 (57%), Positives = 94/128 (73%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKK+YNGEECPYG++C+FLHEDP +FR+DS R+RES+ ISIGT GSP S
Sbjct: 82 IHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTAISIGTNGSPKSYGDAS 141
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ + VN+G + NVK +WKT++C K+E TGHCPFG+ CHFAHGQAELQ GG
Sbjct: 142 NNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQVPGGR 201
Query: 69 NEVETGNA 46
E E A
Sbjct: 202 TEAEIPGA 209
>ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Glycine max]
Length = 345
Score = 166 bits (420), Expect = 3e-39
Identities = 74/128 (57%), Positives = 94/128 (73%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+++KLCKK+YNGEECPYG++C+FLHEDP +FR+DS R+RES+ ISIGT GSP S
Sbjct: 144 IHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTAISIGTNGSPKSYGDAS 203
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ + VN+G + NVK +WKT++C K+E TGHCPFG+ CHFAHGQAELQ GG
Sbjct: 204 NNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQVPGGR 263
Query: 69 NEVETGNA 46
E E A
Sbjct: 264 TEAEIPGA 271
>ref|XP_004287352.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Fragaria vesca subsp. vesca]
Length = 335
Score = 162 bits (409), Expect = 6e-38
Identities = 77/124 (62%), Positives = 92/124 (74%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+KLCKKF NGEECPYG+RCNF HE+P KFREDS R+RE++ ISIGTTG+P +AS +
Sbjct: 146 IHRMKLCKKFNNGEECPYGDRCNFRHEEPAKFREDSSRYRENAAISIGTTGAPMPHASST 205
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
+ N+G + V KP +WKT+ICNKWE TG CPFGEKCHFAHGQ ELQ G
Sbjct: 206 SLEE--NRPNTGINTFLVTPKP-YWKTKICNKWEQTGKCPFGEKCHFAHGQEELQAPGMR 262
Query: 69 NEVE 58
E E
Sbjct: 263 VEAE 266
>ref|XP_006297872.1| hypothetical protein CARUB_v10013913mg [Capsella rubella]
gi|565480466|ref|XP_006297873.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
gi|482566581|gb|EOA30770.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
gi|482566582|gb|EOA30771.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
Length = 387
Score = 158 bits (400), Expect = 6e-37
Identities = 81/148 (54%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I R+KLC+KF GEECPYG+RCNF+HED KFREDSG+ RESSVIS+GTT + + S
Sbjct: 181 ILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTTAADLQSVDNS 240
Query: 249 DQADGIGVVNSGSDA------NWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAEL 88
++ I V GS N VK V+WKTR+C K+E+TG CPFG+KCHFAHGQAEL
Sbjct: 241 TASNHIEVSRQGSIPVPVPMNNGGAVKTVYWKTRLCMKFEITGQCPFGDKCHFAHGQAEL 300
Query: 87 QKFGGVNEVETGNASIGPSKHILNPANE 4
G E E N SK + PANE
Sbjct: 301 HNSVGRVEGEAVNGVASLSKQTVVPANE 328
>ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Solanum tuberosum]
gi|565346403|ref|XP_006340245.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X2
[Solanum tuberosum]
Length = 341
Score = 156 bits (394), Expect = 3e-36
Identities = 77/145 (53%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+K+CKKFYNGEECPYG++CNFLHE P KF+ D R RESS ISIGTTG+ D
Sbjct: 152 IHRMKICKKFYNGEECPYGDKCNFLHERPPKFKTDMPRHRESSAISIGTTGNRCDTELIE 211
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
G N+ SDA V +KPV+WKT+IC+KWE TG CPF ++CHFAHGQ+ELQ G
Sbjct: 212 ISKHG----NADSDA--VRIKPVYWKTKICSKWETTGQCPFRDRCHFAHGQSELQMPTGR 265
Query: 69 NEVE--TGNASIGPSKHILNPANET 1
E++ T + I P + P + +
Sbjct: 266 VEMDMLTNSGPITPRPFSIQPVDSS 290
>ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Solanum lycopersicum]
Length = 341
Score = 155 bits (393), Expect = 4e-36
Identities = 77/145 (53%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGS 250
I+R+K+CKKFYNGEECPYG++CNFLHE P KF+ D R RESS ISIGTTG+ D
Sbjct: 152 IHRMKICKKFYNGEECPYGDKCNFLHERPPKFKTDMPRHRESSAISIGTTGNRCDTELIE 211
Query: 249 DQADGIGVVNSGSDANWVNVKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKFGGV 70
G N+ SDA V +KPV+WKT+IC+KWE TG CPF ++CHFAHGQ+ELQ G
Sbjct: 212 ISKHG----NADSDA--VRIKPVYWKTKICSKWETTGQCPFRDRCHFAHGQSELQMPTGR 265
Query: 69 NEVE--TGNASIGPSKHILNPANET 1
E++ T + I P + P + +
Sbjct: 266 VEMDMLTNSGPITPRPFSVQPVDSS 290
>ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata] gi|297329015|gb|EFH59434.1| zinc finger
(CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 154 bits (388), Expect = 2e-35
Identities = 78/145 (53%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Frame = -3
Query: 429 INRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGS--PWDNAS 256
I R+KLC+KF GEECPYG+RCNF+HED KFREDSG+ RESSVIS+GT+ + P D AS
Sbjct: 186 ILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTSAADPPSDTAS 245
Query: 255 GSDQADGIGVVNSGSDANWVN-VKPVFWKTRICNKWEMTGHCPFGEKCHFAHGQAELQKF 79
+ + G + + N VK V+WKTR+C K+++TG CPFG+KCHFAHGQ EL
Sbjct: 246 NHIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQTELHNS 305
Query: 78 GGVNEVETGNASIGPSKHILNPANE 4
G + E NA+ SK + PANE
Sbjct: 306 VGRVDGEAVNATASVSKQTVVPANE 330