BLASTX nr result

ID: Sinomenium21_contig00039167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00039167
         (538 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290634.1| PREDICTED: zinc finger protein NUTCRACKER-li...    60   3e-07
gb|EXB26542.1| Zinc finger protein MAGPIE [Morus notabilis]            59   1e-06
emb|CBI25044.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002306797.2| zinc finger family protein [Populus trichoca...    56   6e-06
ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-li...    56   6e-06

>ref|XP_004290634.1| PREDICTED: zinc finger protein NUTCRACKER-like [Fragaria vesca
           subsp. vesca]
          Length = 446

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = -2

Query: 537 LATWQKSDRLTRDFLGLTGVGDHHHQHLCCSVRDHHHLMSFPAGAVDFPTYD------RD 376
           L TWQK+DRLTRDFLGLT    +   H   +V     ++++  GAVDF  Y       R 
Sbjct: 363 LVTWQKTDRLTRDFLGLTSADGNDCNHGNGAVNVVKDMLTYAGGAVDFQQYHHHDQRLRG 422

Query: 375 HSSIMKPSSFGL----MSDTWGE 319
           + +++KP  FG      S+TWG+
Sbjct: 423 NHALLKPQGFGFAETPASETWGD 445


>gb|EXB26542.1| Zinc finger protein MAGPIE [Morus notabilis]
          Length = 459

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
 Frame = -2

Query: 537 LATWQKSDRLTRDFLGLT------------GVGDHHHQ-HLCCSVRDHHHLMSFPAGAVD 397
           LATWQKSDR TRDFLGLT            G GD +    +  SV+D    M   AG V+
Sbjct: 373 LATWQKSDRFTRDFLGLTAVDHGNGRSGGDGAGDRNGAVDISVSVKD----MLTYAGGVE 428

Query: 396 FPTYDRDHSSIMKPSSFGL----MSDTWGE 319
           F  Y     S++KP  FG      S+TWG+
Sbjct: 429 FAAYHEREGSLLKPQGFGFAAASASETWGD 458


>emb|CBI25044.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/73 (47%), Positives = 45/73 (61%)
 Frame = -2

Query: 537 LATWQKSDRLTRDFLGLTGVGDHHHQHLCCSVRDHHHLMSFPAGAVDFPTYDRDHSSIMK 358
           L+TWQKSDRLTRDFLGLTG       ++  ++RD    M    G V+F  YDRDH S++K
Sbjct: 318 LSTWQKSDRLTRDFLGLTGESG-GSVNVSVNMRD----MLQYTGGVEFQPYDRDH-SLLK 371

Query: 357 PSSFGLMSDTWGE 319
              F    +TWG+
Sbjct: 372 AHGF----ETWGD 380


>ref|XP_002306797.2| zinc finger family protein [Populus trichocarpa]
           gi|550339614|gb|EEE93793.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 474

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
 Frame = -2

Query: 537 LATWQKSDRLTRDFLGLTGVGDHHHQHLCCSVRDHHHLMSFPAGAVDFPTY--------- 385
           LATWQKSDRLTRDFLGLTG  + HH H   +       ++      +  TY         
Sbjct: 385 LATWQKSDRLTRDFLGLTGECEDHHGHAASNSNGSSGGVNASMNVREILTYTGGVGFHQQ 444

Query: 384 ---DRDHSSIMKPSSFGL----MSDTWGE 319
              +RDHS +     FG      S TWG+
Sbjct: 445 QYNERDHSLLKPHGGFGFAQPSASKTWGD 473


>ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 456

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
 Frame = -2

Query: 537 LATWQKSDRLTRDFLGLTGV-------GDHHHQHLCCSVRDHHHLMSFPAGAVDFPTYDR 379
           L+TWQKSDRLTRDFLGLTG        G     ++  ++RD    M    G V+F  YDR
Sbjct: 385 LSTWQKSDRLTRDFLGLTGESGGGSGGGADGAVNVSVNMRD----MLQYTGGVEFQPYDR 440

Query: 378 DHSSIMKPSSFGLMSDTWGE 319
           DH S++K   F    +TWG+
Sbjct: 441 DH-SLLKAHGF----ETWGD 455


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