BLASTX nr result
ID: Sinomenium21_contig00038745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00038745
(385 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containi... 145 7e-45
emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera] 145 3e-44
gb|EXC03889.1| Pentatricopeptide repeat-containing protein [Moru... 137 2e-42
ref|XP_007150478.1| hypothetical protein PHAVU_005G155900g [Phas... 137 1e-39
ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containi... 134 3e-39
ref|XP_006583282.1| PREDICTED: pentatricopeptide repeat-containi... 133 1e-38
ref|XP_006583283.1| PREDICTED: pentatricopeptide repeat-containi... 133 1e-38
ref|XP_004486867.1| PREDICTED: pentatricopeptide repeat-containi... 129 1e-36
ref|XP_003597542.1| Pentatricopeptide repeat-containing protein ... 126 5e-36
ref|XP_007047666.1| Mitochondrial editing factor 22, putative [T... 104 2e-30
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 96 2e-25
ref|XP_007138513.1| hypothetical protein PHAVU_009G215500g, part... 100 2e-25
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar... 96 6e-25
ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Popu... 97 6e-25
ref|XP_006658483.1| PREDICTED: pentatricopeptide repeat-containi... 106 8e-25
ref|XP_007208505.1| hypothetical protein PRUPE_ppa026465mg, part... 92 8e-25
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 96 1e-24
ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat... 93 1e-24
ref|XP_007225005.1| hypothetical protein PRUPE_ppa020300mg [Prun... 91 1e-24
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-24
>ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 145 bits (365), Expect(2) = 7e-45
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMI GYAQSGRG +GL LFE+LV E+G PDHICFTAVLTACNHAG LDK I+YF++M
Sbjct: 374 TSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMR 433
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
R+YGL P+++QYAC+VDLY R+G+LRKAK+LM
Sbjct: 434 RDYGLVPDLDQYACLVDLYVRNGHLRKAKELM 465
Score = 61.6 bits (148), Expect(2) = 7e-45
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFV S+L+DMYSKCGSIDEA +FDQ VE+N++LWT
Sbjct: 339 VFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWT 374
Score = 42.0 bits (97), Expect(2) = 5e-08
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -2
Query: 381 FVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
FV S LID YSKCG ID+A +F +ER++IL+
Sbjct: 239 FVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILF 272
Score = 40.8 bits (94), Expect(2) = 5e-08
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = -1
Query: 286 LMDTSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFD 107
++ SMI GY+Q+ G + L+LF ++ +GL P T++L AC +L +
Sbjct: 270 ILFNSMISGYSQNLFGEEALKLFVEM-RNNGLNPTDHTLTSILNACGSLTILQQG-RQVH 327
Query: 106 KMTRNYGLDPEVNQYACMVDLYGRHGYLRKAK 11
+ G + V + ++D+Y + G + +A+
Sbjct: 328 SLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 359
>emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 145 bits (366), Expect(2) = 3e-44
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMI GYAQSGRG +GL LFE+LV E+G PDHICFTAVLTACNHAG LDK I+YF++M
Sbjct: 1589 TSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMR 1648
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
R+YGL P+++QYAC+VDLY R+G+LRKAK+LM
Sbjct: 1649 RDYGLVPDLDQYACLVDLYVRNGHLRKAKELM 1680
Score = 58.9 bits (141), Expect(2) = 3e-44
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFV S+L+DMYSKCGSIDEA +F Q VE+N++LWT
Sbjct: 1554 VFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWT 1589
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -2
Query: 381 FVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
FV S LID YSKCG ID+A +F +ER++IL+
Sbjct: 1454 FVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILF 1487
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = -1
Query: 286 LMDTSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFD 107
++ SMI GY+Q+ G + L+LF ++ +GL P T++L AC +L +
Sbjct: 1485 ILFNSMISGYSQNLXGEEALKLFVZM-RNNGLXPTDHTLTSILNACGSLTILQQG-RQVH 1542
Query: 106 KMTRNYGLDPEVNQYACMVDLYGRHGYLRKAK 11
+ G + V + ++D+Y + G + +A+
Sbjct: 1543 SLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 1574
>gb|EXC03889.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 633
Score = 137 bits (344), Expect(2) = 2e-42
Identities = 61/95 (64%), Positives = 78/95 (82%)
Frame = -1
Query: 286 LMDTSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFD 107
+M TSMI GYAQSGRG++ LELF+ L E+ +PDH+CFTAVLTACNH G L+ I YF+
Sbjct: 372 IMWTSMITGYAQSGRGSEALELFDHLAAEECFKPDHVCFTAVLTACNHVGFLEGGINYFN 431
Query: 106 KMTRNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
KM +YGL PE++QYAC+VDLY R+G+LR+AK+LM
Sbjct: 432 KMINDYGLIPEIDQYACLVDLYARNGHLREAKELM 466
Score = 61.6 bits (148), Expect(2) = 2e-42
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFVAS+LIDMYSKCG IDEA +FDQ VE+N+I+WT
Sbjct: 340 VFVASTLIDMYSKCGCIDEARCVFDQTVEKNTIMWT 375
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 25/89 (28%), Positives = 49/89 (55%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
+SMI GY+Q+ G + L LF ++ + L P+ T+VL AC + +L + + +T
Sbjct: 274 SSMISGYSQNLYGEEALRLFAEMRNMN-LSPNEHALTSVLNACGNLTVLQEGSKVHSLVT 332
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAK 11
+ G + V + ++D+Y + G + +A+
Sbjct: 333 K-MGSESNVFVASTLIDMYSKCGCIDEAR 360
Score = 39.3 bits (90), Expect(2) = 2e-07
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -2
Query: 381 FVASSLIDMYSKCGSIDEAHYIFDQQVERNSIL 283
FV SSLID YSK G ID+A +F + ER+ IL
Sbjct: 240 FVVSSLIDCYSKWGEIDQAALVFGETTERDIIL 272
>ref|XP_007150478.1| hypothetical protein PHAVU_005G155900g [Phaseolus vulgaris]
gi|561023742|gb|ESW22472.1| hypothetical protein
PHAVU_005G155900g [Phaseolus vulgaris]
Length = 527
Score = 137 bits (344), Expect(2) = 1e-39
Identities = 62/92 (67%), Positives = 77/92 (83%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYAQ GRG++ LELF+ L+ + L PDHIC TAVLTACNHAGLLDK +EYF+KMT
Sbjct: 342 TSMIMGYAQCGRGSEALELFDCLLTKQELIPDHICLTAVLTACNHAGLLDKGVEYFNKMT 401
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
NYGL P+++QYAC++DLY R+G L KA+ L+
Sbjct: 402 SNYGLSPDIDQYACLIDLYARNGNLSKARDLI 433
Score = 52.0 bits (123), Expect(2) = 1e-39
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFV S+LIDMYSK G IDEA + DQ E+N++LWT
Sbjct: 307 VFVGSALIDMYSKGGDIDEAQLVLDQTSEKNNVLWT 342
>ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449501263|ref|XP_004161322.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 265
Score = 134 bits (337), Expect(2) = 3e-39
Identities = 59/95 (62%), Positives = 77/95 (81%)
Frame = -1
Query: 286 LMDTSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFD 107
++ TSMI +AQ GRG + L+LFE L+ ED PDHICFTAVLTACNHAGLLD+A+EYF+
Sbjct: 39 VLSTSMITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFN 98
Query: 106 KMTRNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
KM R Y LDP+++ YAC++DLY R+G + KAK++M
Sbjct: 99 KMRREYHLDPQIDHYACLIDLYARNGNVEKAKQMM 133
Score = 53.5 bits (127), Expect(2) = 3e-39
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFV SL+DMYSKCGSIDEA IF+Q V++NS+L T
Sbjct: 7 VFVVCSLLDMYSKCGSIDEAFSIFNQTVQKNSVLST 42
>ref|XP_006583282.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like isoform X1 [Glycine max]
Length = 549
Score = 133 bits (335), Expect(2) = 1e-38
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYA GRG++ LELF+ L+ + + PDHICFTAVLTACNHAG LDK +EYF+KMT
Sbjct: 327 TSMIMGYAHCGRGSEALELFDCLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMT 386
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
YGL P+++QYAC++DLY R+G L KA+ LM
Sbjct: 387 TYYGLSPDIDQYACLIDLYARNGNLSKARNLM 418
Score = 52.0 bits (123), Expect(2) = 1e-38
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFVAS+LIDMYSK G+IDEA + DQ ++N++LWT
Sbjct: 292 VFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWT 327
>ref|XP_006583283.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like isoform X2 [Glycine max]
Length = 505
Score = 133 bits (335), Expect(2) = 1e-38
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYA GRG++ LELF+ L+ + + PDHICFTAVLTACNHAG LDK +EYF+KMT
Sbjct: 283 TSMIMGYAHCGRGSEALELFDCLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMT 342
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
YGL P+++QYAC++DLY R+G L KA+ LM
Sbjct: 343 TYYGLSPDIDQYACLIDLYARNGNLSKARNLM 374
Score = 52.0 bits (123), Expect(2) = 1e-38
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFVAS+LIDMYSK G+IDEA + DQ ++N++LWT
Sbjct: 248 VFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWT 283
>ref|XP_004486867.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Cicer arietinum]
Length = 537
Score = 129 bits (323), Expect(2) = 1e-36
Identities = 58/92 (63%), Positives = 74/92 (80%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYAQ GRG + +ELF+ L+ + L PD +CFTAVLTACNHAG +DK EYF+KM
Sbjct: 315 TSMIMGYAQCGRGLEAVELFDCLLTKQELIPDQVCFTAVLTACNHAGFIDKGEEYFNKMR 374
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
+YGL P+++QYAC++DLY R+G LRKA+ LM
Sbjct: 375 TSYGLSPDIDQYACLIDLYARNGNLRKARDLM 406
Score = 50.1 bits (118), Expect(2) = 1e-36
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFVAS+LIDMYSK G ID A + DQ RN++LWT
Sbjct: 280 VFVASALIDMYSKGGDIDAARCVLDQTSNRNTVLWT 315
>ref|XP_003597542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486590|gb|AES67793.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 280
Score = 126 bits (317), Expect(2) = 5e-36
Identities = 58/92 (63%), Positives = 71/92 (77%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYAQ GRG D LELF+ L+ + L PDH+CFTA LTACNHAG ++K EYF+KM
Sbjct: 42 TSMIMGYAQCGRGLDALELFDYLLTKKELIPDHVCFTAFLTACNHAGFINKGEEYFNKMI 101
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
YGL P+++ YAC++DLY R+G LRKA LM
Sbjct: 102 TKYGLSPDIDIYACLIDLYARNGNLRKATDLM 133
Score = 50.4 bits (119), Expect(2) = 5e-36
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
V+VAS+LIDMYSK G IDEA + DQ ++N++LWT
Sbjct: 7 VYVASALIDMYSKGGDIDEAQCVLDQTSKKNTVLWT 42
>ref|XP_007047666.1| Mitochondrial editing factor 22, putative [Theobroma cacao]
gi|508699927|gb|EOX91823.1| Mitochondrial editing factor
22, putative [Theobroma cacao]
Length = 527
Score = 104 bits (259), Expect(2) = 2e-30
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMIMGYAQSGR +D LE FE L ++ PDHICFTAVLTACNHAG+LDK IEYF++MT
Sbjct: 363 TSMIMGYAQSGRASDALEFFEHLGTKESYVPDHICFTAVLTACNHAGILDKGIEYFNRMT 422
Query: 97 RNYGL 83
R+YGL
Sbjct: 423 RDYGL 427
Score = 53.9 bits (128), Expect(2) = 2e-30
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFV ++LIDMYSKCG ++EA + FDQ V++N +LWT
Sbjct: 328 VFVVTALIDMYSKCGYVEEARHGFDQTVQKNRVLWT 363
>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 95.9 bits (237), Expect(2) = 2e-25
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
T+MIMG A G+ D +ELFEQ+ E G++P+H+ F AVLTAC+H GL+D+A +YF+ MT
Sbjct: 410 TAMIMGCALHGQAPDAIELFEQMETE-GIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKA 14
R++G+ P V YA + DL GR G L +A
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
Score = 45.8 bits (107), Expect(2) = 2e-25
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+F+ASSL+DMY+KCG+I A IFD+ R+ + WT
Sbjct: 375 IFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWT 410
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
S+I G Q+G +GL F Q++ ++P F++++ AC H L + +TR
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAKKL 5
N G D + + +VD+Y + G +R AK++
Sbjct: 369 N-GFDENIFIASSLVDMYAKCGNIRTAKQI 397
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
++VASSLIDMY+KC + ++ +F ER+ I W
Sbjct: 274 IYVASSLIDMYAKCTRVADSCRVFTLLTERDGISW 308
>ref|XP_007138513.1| hypothetical protein PHAVU_009G215500g, partial [Phaseolus
vulgaris] gi|561011600|gb|ESW10507.1| hypothetical
protein PHAVU_009G215500g, partial [Phaseolus vulgaris]
Length = 570
Score = 100 bits (248), Expect(2) = 2e-25
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
SMI G+AQ+GRG +GLELFE++V E G+RPD I F VL AC+H GL+D+ YFD M R
Sbjct: 374 SMIGGFAQNGRGQEGLELFEEMVKE-GVRPDGISFVNVLFACSHNGLVDRGRRYFDLMKR 432
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
YG+ P V Y CM+DL GR + +A++L+
Sbjct: 433 EYGIRPGVVHYTCMIDLLGRAELIEEAERLL 463
Score = 41.2 bits (95), Expect(2) = 2e-25
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
V V S+L+DMY+KCGS+D A+ +F + RN I W
Sbjct: 338 VVVESALVDMYAKCGSVDFAYRLFLRMEVRNLITW 372
>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
[Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 95.5 bits (236), Expect(2) = 6e-25
Identities = 43/91 (47%), Positives = 64/91 (70%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
+MI+G+AQ+G G + LELF +++ E G +PDHI VL+AC HAG +++ YF MTR
Sbjct: 463 AMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
++G+ P + Y CMVDL GR G+L +AK ++
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Score = 44.3 bits (103), Expect(2) = 6e-25
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
+FV +SLIDMY KCG ++E + +F + +ER+ + W
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Score = 47.0 bits (110), Expect(2) = 7e-09
Identities = 16/35 (45%), Positives = 28/35 (80%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
V++ S+L+DMYSKCG++++A +FD+ +RN + W
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Score = 38.5 bits (88), Expect(2) = 7e-09
Identities = 19/88 (21%), Positives = 45/88 (51%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
S+I + Q+G + L++F+ ++ E + PD + +V++AC + E ++ +
Sbjct: 223 SLITCFEQNGPAVEALDVFQMML-ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAK 11
N L ++ VD+Y + +++A+
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEAR 309
>ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Populus trichocarpa]
gi|550347631|gb|ERP65769.1| hypothetical protein
POPTR_0001s18710g [Populus trichocarpa]
Length = 572
Score = 96.7 bits (239), Expect(2) = 6e-25
Identities = 46/92 (50%), Positives = 67/92 (72%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
T++IMGYA G+ + LFEQ+ E G+RP+++ F AVLTAC+HAG++++A YF+ MT
Sbjct: 383 TAIIMGYALHGQACHAVSLFEQMEME-GVRPNYVAFVAVLTACSHAGMMNEAWRYFNSMT 441
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
+NYG+ P + YACM DL GR G L +A +L+
Sbjct: 442 QNYGIVPGLEHYACMADLLGRAGKLDEAFELI 473
Score = 43.1 bits (100), Expect(2) = 6e-25
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+FV+SSL+DMY+KCG I A +IFD+ + + WT
Sbjct: 348 MFVSSSLVDMYAKCGYIKVARWIFDRMDVHDMVSWT 383
Score = 38.5 bits (88), Expect(2) = 5e-06
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
VF+ SSL+ MY+KC +++A +F+ +R+SI W
Sbjct: 247 VFIGSSLVGMYAKCARVEDALQVFNILPQRDSISW 281
Score = 37.4 bits (85), Expect(2) = 5e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
S+I G Q+G +GL F Q++ + ++P + F++++ AC + L + + R
Sbjct: 283 SIIAGCVQNGLFDEGLRFFHQML-KAKVKPVPVSFSSIMPACANLIALHLGKQLHGFIIR 341
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAK 11
G D + + +VD+Y + GY++ A+
Sbjct: 342 -VGYDDNMFVSSSLVDMYAKCGYIKVAR 368
>ref|XP_006658483.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like, partial [Oryza brachyantha]
Length = 673
Score = 106 bits (265), Expect(2) = 8e-25
Identities = 46/92 (50%), Positives = 68/92 (73%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSMI GY G+GT L+LFEQ++ + G++PDHI VL+AC+H+GL+ + E FDKM
Sbjct: 453 TSMIAGYGMQGKGTLALQLFEQMI-DSGIKPDHIIMVTVLSACSHSGLVPEGEEIFDKMV 511
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
R+YG+ P++ Y+CM+DLY R G L KA++++
Sbjct: 512 RSYGIKPQMEHYSCMIDLYARAGLLEKAEEML 543
Score = 32.7 bits (73), Expect(2) = 8e-25
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -2
Query: 372 SSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+SLIDMYSK G + A +FD +R++I +T
Sbjct: 422 NSLIDMYSKSGRLFVAQNVFDSMDDRDTISYT 453
>ref|XP_007208505.1| hypothetical protein PRUPE_ppa026465mg, partial [Prunus persica]
gi|462404147|gb|EMJ09704.1| hypothetical protein
PRUPE_ppa026465mg, partial [Prunus persica]
Length = 588
Score = 92.0 bits (227), Expect(2) = 8e-25
Identities = 42/92 (45%), Positives = 65/92 (70%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TSM++GY G G + +ELF+++V + G+RPD I F AVL+AC+HAGL+D+ + YF M
Sbjct: 366 TSMMIGYGAHGYGKEAVELFDEMV-KSGIRPDQIVFMAVLSACSHAGLVDEGLRYFKSMI 424
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
+Y + P+ + Y C+VDL GR G + +A +L+
Sbjct: 425 NDYKITPDQDIYGCVVDLLGRAGRVEEAYELI 456
Score = 47.4 bits (111), Expect(2) = 8e-25
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 378 VASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+A++L+DMY+KCGSI +AH IF Q RN + WT
Sbjct: 333 LANALVDMYAKCGSITDAHKIFSQMSHRNLVSWT 366
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 95.9 bits (237), Expect(2) = 1e-24
Identities = 45/91 (49%), Positives = 65/91 (71%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
SMI G+AQ+GRG + L +F Q+V E G++PD+I F +L AC+H GL+D+ EYF MT+
Sbjct: 490 SMIGGFAQNGRGEEALRIFNQMVKE-GIKPDYISFIGILFACSHRGLVDEGREYFISMTK 548
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
+YG+ + Y+CMVDL GR G L +A+ L+
Sbjct: 549 DYGIKVGIEHYSCMVDLLGRAGLLEEAEILI 579
Score = 43.1 bits (100), Expect(2) = 1e-24
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
V V S+L+D+Y+KCG I+ A IFDQ RN I W
Sbjct: 454 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITW 488
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TS+I ++ + L F + + G+ PD F VLTAC + G L + E K+
Sbjct: 290 TSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVI 349
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKL 5
G V + +VD+YG+ G + +++++
Sbjct: 350 TT-GFCGNVVVESSLVDMYGKCGSVGESQRI 379
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = -2
Query: 378 VASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+AS+LIDM+ + ++D+A +FD+ +E ++I WT
Sbjct: 257 IASALIDMHGRNCALDDARQLFDELLEPDAICWT 290
>ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Fragaria vesca subsp. vesca]
Length = 693
Score = 92.8 bits (229), Expect(2) = 1e-24
Identities = 43/88 (48%), Positives = 62/88 (70%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
T+M MGYA G D + LFEQ+ GE ++P+++ F AVLTAC+HAGL+D+A +Y++ MT
Sbjct: 391 TAMTMGYALHGHAHDAISLFEQMKGES-VKPNYVAFMAVLTACSHAGLVDEAWKYYNSMT 449
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKA 14
+ YG+ P + YA + DL GR G L +A
Sbjct: 450 KEYGIAPGIEHYAAVADLLGRAGRLDQA 477
Score = 46.2 bits (108), Expect(2) = 1e-24
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
++VASSL+DMY+KCG+I A +IFD+ + + WT
Sbjct: 356 IYVASSLVDMYAKCGNIKMARWIFDKMEHHDMVSWT 391
>ref|XP_007225005.1| hypothetical protein PRUPE_ppa020300mg [Prunus persica]
gi|462421941|gb|EMJ26204.1| hypothetical protein
PRUPE_ppa020300mg [Prunus persica]
Length = 671
Score = 91.3 bits (225), Expect(2) = 1e-24
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
T+MIMGYA G D FEQ+ GE ++P+++ F AVLTAC+HAGL+DKA +YF+ MT
Sbjct: 369 TAMIMGYALHGHAPDAFSSFEQMEGE-AVKPNYVSFMAVLTACSHAGLVDKAWKYFNSMT 427
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKA 14
+ Y + P + YA + D+ GR G L +A
Sbjct: 428 KKYDIAPGIEHYAAVADVLGRAGRLEEA 455
Score = 47.8 bits (112), Expect(2) = 1e-24
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
VFVASSL+DMY+KCG+I A +IFD+ + + + WT
Sbjct: 334 VFVASSLVDMYAKCGNIRIARWIFDKMEQHDMVSWT 369
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 95.9 bits (237), Expect(2) = 1e-24
Identities = 45/91 (49%), Positives = 65/91 (71%)
Frame = -1
Query: 274 SMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMTR 95
SMI G+AQ+GRG + L +F Q+V E G++PD+I F +L AC+H GL+D+ EYF MT+
Sbjct: 431 SMIGGFAQNGRGEEALRIFNQMVKE-GIKPDYISFIGILFACSHRGLVDEGREYFISMTK 489
Query: 94 NYGLDPEVNQYACMVDLYGRHGYLRKAKKLM 2
+YG+ + Y+CMVDL GR G L +A+ L+
Sbjct: 490 DYGIKVGIEHYSCMVDLLGRAGLLEEAEILI 520
Score = 43.1 bits (100), Expect(2) = 1e-24
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 384 VFVASSLIDMYSKCGSIDEAHYIFDQQVERNSILW 280
V V S+L+D+Y+KCG I+ A IFDQ RN I W
Sbjct: 395 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITW 429
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = -1
Query: 277 TSMIMGYAQSGRGTDGLELFEQLVGEDGLRPDHICFTAVLTACNHAGLLDKAIEYFDKMT 98
TS+I ++ + L F + + G+ PD F VLTAC + G L + E K+
Sbjct: 231 TSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVI 290
Query: 97 RNYGLDPEVNQYACMVDLYGRHGYLRKAKKL 5
G V + +VD+YG+ G + +++++
Sbjct: 291 TT-GFCGNVVVESSLVDMYGKCGSVGESQRI 320
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = -2
Query: 378 VASSLIDMYSKCGSIDEAHYIFDQQVERNSILWT 277
+AS+LIDM+ + ++D+A +FD+ +E ++I WT
Sbjct: 198 IASALIDMHGRNCALDDARQLFDELLEPDAICWT 231