BLASTX nr result
ID: Sinomenium21_contig00038497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00038497
(1971 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera] 117 5e-39
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] 117 2e-38
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera] 115 5e-38
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera] 113 1e-37
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera] 114 2e-37
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] 109 6e-37
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 112 6e-36
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 105 1e-35
emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera] 105 6e-34
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 108 5e-32
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 105 1e-31
emb|CAN71436.1| hypothetical protein VITISV_039529 [Vitis vinifera] 104 1e-31
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] 88 2e-30
emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera] 98 2e-29
gb|ABI34342.1| Polyprotein, putative [Solanum demissum] 96 4e-29
gb|ABI34329.1| Integrase core domain containing protein [Solanum... 96 5e-29
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 98 2e-28
emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera] 87 1e-27
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 87 2e-27
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab... 87 1e-26
>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 117 bits (294), Expect(2) = 5e-39
Identities = 56/111 (50%), Positives = 80/111 (72%)
Frame = +3
Query: 6 VTFEPLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDD 185
V+ + +C CQLGK ALPFN SD IS + F+LIHS++W + V + GG+RYFV+FIDD
Sbjct: 499 VSKDNFDCTSCQLGKQPALPFNNSDSISKSIFELIHSDVWGPSPVASIGGSRYFVVFIDD 558
Query: 186 YSWYT*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
YS Y+ ++ + RSE+L + F ++V+T F++ IK FRSDNA+EYT +F
Sbjct: 559 YSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEYTQHAF 609
Score = 72.8 bits (177), Expect(2) = 5e-39
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL+SA + FWGEA++ AV++IN+ S +I N
Sbjct: 621 HLTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEASLHAVHAINRIPSTVIHN 680
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 681 QTPYERLF 688
Score = 62.8 bits (151), Expect(2) = 4e-16
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E D F RM +S + IL+W NTS+PSI +LL F + K+AW+ L +Y+ +
Sbjct: 51 KGASEEDAVFLSRMIEWDSHNHMILTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTT 110
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
++++QL +L+ + QE GQSI+ + + W
Sbjct: 111 HG-SMKYQLVVELHQLRQEPGQSINDYYDQLRFIW 144
Score = 50.8 bits (120), Expect(2) = 4e-16
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP++ + +A+ RD + +M + DFE R LL+RSP +L+ A+
Sbjct: 145 DQIDLSDPTWGCSTDAQQYATIRDEFRLYEFLMSLHKDFEPIRGQLLNRSPAPSLDTAVN 204
Query: 886 KLIFEETRQKT 854
+L+ EE R T
Sbjct: 205 ELVREEARLAT 215
>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 117 bits (294), Expect(2) = 2e-38
Identities = 56/111 (50%), Positives = 80/111 (72%)
Frame = +3
Query: 6 VTFEPLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDD 185
V+ + +C CQLGK ALPFN SD IS + F+LIHS++W + V + GG+RYFV+FIDD
Sbjct: 507 VSKDNFDCTSCQLGKQPALPFNNSDSISKSIFELIHSDVWGPSPVASIGGSRYFVVFIDD 566
Query: 186 YSWYT*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
YS Y+ ++ + RSE+L + F ++V+T F++ IK FRSDNA+EYT +F
Sbjct: 567 YSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEYTQHAF 617
Score = 70.5 bits (171), Expect(2) = 2e-38
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI D VR+LL+SA + FWGEA++ AV++IN+ S +I N
Sbjct: 629 HLTCPGTSQQNGRAERKLRHILDXVRALLLSAKIPAPFWGEASLHAVHAINRIPSTVIHN 688
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 689 QTPYERLF 696
Score = 62.8 bits (151), Expect(2) = 4e-15
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E D F RM +S + IL+W NTS+PSI +LL F + K+AW+ L +Y+ +
Sbjct: 51 KGASEEDAVFLSRMIEWDSHNHMILTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTT 110
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
++++QL +L+ + QE GQSI+ + + W
Sbjct: 111 HG-SMKYQLVVELHQLRQEPGQSINDYYDQLRFIW 144
Score = 47.4 bits (111), Expect(2) = 4e-15
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP + + +AS RD + +M + DFE R LL+RS +L+ A+
Sbjct: 145 DQIDLSDPIWECSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNRSXAPSLDTAVN 204
Query: 886 KLIFEETRQKT 854
+L+ EE R T
Sbjct: 205 ELVREEARLAT 215
>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
Length = 1261
Score = 115 bits (287), Expect(2) = 5e-38
Identities = 55/111 (49%), Positives = 79/111 (71%)
Frame = +3
Query: 6 VTFEPLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDD 185
V+ + +C CQLGK ALPFN S+ IS + F+LIHS++W V + GG+RYFV+FIDD
Sbjct: 417 VSKDNFDCTSCQLGKQPALPFNNSESISKSIFELIHSDVWGPFPVASIGGSRYFVVFIDD 476
Query: 186 YSWYT*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
YS Y+ ++ + RSE+L + F ++V+T F++ IK FRSDNA+EYT +F
Sbjct: 477 YSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEYTQHAF 527
Score = 72.0 bits (175), Expect(2) = 5e-38
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL+SA + FWGEA++ AV++IN+ S +I N
Sbjct: 539 HPTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEASLHAVHAINRIPSAVIHN 598
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 599 QTPYERLF 606
Score = 62.4 bits (150), Expect(2) = 2e-14
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E D F RM +S + IL+W NTS+PSI +LL F + K+AW+ L +Y+ +
Sbjct: 51 KGASEEDAIFLSRMIEWDSHNHMILTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTT 110
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
++++QL +L+ + QE GQSI+ + + W
Sbjct: 111 HG-SMKYQLVVELHQLRQEPGQSINDYYDQLRFIW 144
Score = 45.4 bits (106), Expect(2) = 2e-14
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP+++ + +AS RD + +M + DFE R LL+RSP +L+ A+
Sbjct: 145 DQIDLSDPTWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNRSPAPSLDTAVN 204
Query: 886 KL 881
+L
Sbjct: 205 EL 206
>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
Length = 1287
Score = 113 bits (283), Expect(2) = 1e-37
Identities = 52/104 (50%), Positives = 76/104 (73%)
Frame = +3
Query: 27 CVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*L 206
C CQ+GK ALPFN S+ IS + F+LIHS++W + V + GG+RYFV+FIDDYS Y+ +
Sbjct: 481 CTSCQIGKQPALPFNNSESISHSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWI 540
Query: 207 YLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
+ + RSE+L + F ++++T F++ IK FRSDNA+EYT +F
Sbjct: 541 FPMKSRSEILSIYSNFAKMIETQFSKRIKTFRSDNALEYTQHAF 584
Score = 72.4 bits (176), Expect(2) = 1e-37
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGR E + +HI DTVR+LL+SA + FWGEAA+ AV++IN+ S +I N
Sbjct: 596 HLTCPGTSQQNGRVERKLRHILDTVRALLLSAKIPAPFWGEAALHAVHAINRIPSAVIHN 655
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 656 QTPYEHLF 663
Score = 63.9 bits (154), Expect(2) = 3e-16
Identities = 35/95 (36%), Positives = 57/95 (60%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E D F RM +S + IL+W NTS+PSI +L+ F + K+AW+ LA +Y+ +
Sbjct: 23 KGASEGDAVFLNRMIEWDSHNHMILTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTT 82
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
+L++QL +L+ + QE GQSI+ + + W
Sbjct: 83 HG-SLKYQLVVELHQLRQEPGQSINDYYDQLRFIW 116
Score = 50.1 bits (118), Expect(2) = 3e-16
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP+++ + +AS RD + +M + DFE LL+RSP +L+ A+
Sbjct: 117 DQIDLSDPTWTCSKDAQQYASIRDEFRLYEFLMSLHKDFEPIHGQLLNRSPAPSLDTAVN 176
Query: 886 KLIFEETRQKT 854
+L+ EE R T
Sbjct: 177 ELVREEARLAT 187
>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
Length = 1293
Score = 114 bits (284), Expect(2) = 2e-37
Identities = 53/111 (47%), Positives = 80/111 (72%)
Frame = +3
Query: 6 VTFEPLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDD 185
V+ + +C CQLGK ALPFN S+ IS++ F+LIHS++W + + + GG+RYFV+FIDD
Sbjct: 309 VSKDNFDCTSCQLGKQPALPFNNSESISNSIFELIHSDVWGPSPIASIGGSRYFVVFIDD 368
Query: 186 YSWYT*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
YS Y+ ++ + RS +L + F ++V+T F++ IK FRSDNA+EYT +F
Sbjct: 369 YSRYSWIFPMXSRSXILPIYSNFAKMVETQFSKXIKTFRSDNALEYTQYAF 419
Score = 71.6 bits (174), Expect(2) = 2e-37
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL SA + FWGEA++ V++IN+ S I N
Sbjct: 431 HLTCPGTSQQNGRAERKLRHILDTVRALLFSAKVPAPFWGEASLHXVHAINRIPSAXIHN 490
Query: 553 KTLYKVLY 576
+TLY+ L+
Sbjct: 491 QTLYERLF 498
>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
Length = 1013
Score = 109 bits (273), Expect(2) = 6e-37
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = +3
Query: 27 CVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*L 206
C CQLGK LPFN S+ IS++ F+LIHS++W + V + GG+RYFV+FIDDYS Y +
Sbjct: 205 CTSCQLGKQPTLPFNNSESISNSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYIWI 264
Query: 207 YLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
+ + SE+L + F ++++T F++ IK FRSDNA+EYT +F
Sbjct: 265 FPMKSCSEILSIYSNFAKMIETQFSKRIKTFRSDNALEYTQHAF 308
Score = 73.9 bits (180), Expect(2) = 6e-37
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL+SA + FWGEAA+ AV++IN+ S +I N
Sbjct: 320 HLTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAALHAVHAINRIPSAVIHN 379
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 380 QTPYERLF 387
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 112 bits (281), Expect(2) = 6e-36
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = +3
Query: 24 NCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT* 203
+C C+L K ALPF+KS +S FDL+HS++W + VPTKGG+RY+V FIDDY+ Y
Sbjct: 28 DCCGCKLAKFSALPFSKSVSLSYAPFDLVHSDVWGPSPVPTKGGSRYYVSFIDDYTRYCW 87
Query: 204 LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSFLDSL 350
+YL+ RSE LD + F+ +VKT N VIK FR D EYTS+ F + L
Sbjct: 88 VYLMKHRSEFLDIYHMFRAMVKTQHNAVIKCFRCDLGGEYTSNKFSELL 136
Score = 67.4 bits (163), Expect(2) = 6e-36
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SC T QNG AE +H+HI +T RSLL+SA++ FWGEA +TAV++IN+ S +IS +
Sbjct: 146 SCTDTPQQNGVAERKHRHIIETARSLLLSASVPSEFWGEAVLTAVHAINRIPSSVISGLS 205
Query: 559 LYKVLY 576
++ LY
Sbjct: 206 PFEKLY 211
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 105 bits (262), Expect(2) = 1e-35
Identities = 49/104 (47%), Positives = 73/104 (70%)
Frame = +3
Query: 27 CVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*L 206
C C L K ALPFN + IS++ F+LIHS++W + V + G +RYFV+FIDDYS Y+ +
Sbjct: 1632 CTSCXLXKQPALPFNNXESISNSIFELIHSDVWGPSPVASIGXSRYFVVFIDDYSRYSWI 1691
Query: 207 YLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
+ + RSE+L + F ++++T F++ IK FRSDNA+EYT +F
Sbjct: 1692 FPMKSRSEILSIYSNFAKMIETQFSKRIKTFRSDNALEYTQHAF 1735
Score = 73.9 bits (180), Expect(2) = 1e-35
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL+SA + FWGEAA+ AV++IN+ S +I N
Sbjct: 1747 HLTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAALHAVHAINRIPSAVIHN 1806
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 1807 QTPYERLF 1814
Score = 63.9 bits (154), Expect(2) = 3e-16
Identities = 35/95 (36%), Positives = 57/95 (60%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E D F RM +S + IL+W NTS+PSI +L+ F + K+AW+ LA +Y+ +
Sbjct: 1174 KGASEGDAVFLNRMIEWDSHNHMILTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTT 1233
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
+L++QL +L+ + QE GQSI+ + + W
Sbjct: 1234 HG-SLKYQLVVELHQLRQEPGQSINDYYDQLRFIW 1267
Score = 50.1 bits (118), Expect(2) = 3e-16
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP+++ K +AS RD + +M + DFE R LL+RSP +L+ A+
Sbjct: 1268 DQIDLSDPTWTCLKDAKQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNRSPAPSLDTAVN 1327
Query: 886 KLIFEETRQKT 854
+L+ EE T
Sbjct: 1328 ELVREEAXLAT 1338
>emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera]
Length = 2655
Score = 105 bits (262), Expect(2) = 6e-34
Identities = 51/100 (51%), Positives = 74/100 (74%)
Frame = +3
Query: 39 QLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*LYLLH 218
+LGK ALPFN S+ IS++ F+LIHS++W + V + GG+RYFV+FIDDYS Y+ ++ +
Sbjct: 1809 RLGKQPALPFNNSESISNSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMK 1868
Query: 219 DRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
RSE+L + F ++V+T F++ IK FRSDNA+EYT F
Sbjct: 1869 SRSEILPIYSNFAKMVETQFSKRIKTFRSDNALEYTQYVF 1908
Score = 68.2 bits (165), Expect(2) = 6e-34
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRA + +HI DTVR+LL+SA + FWGEA++ V++IN S +I N
Sbjct: 1920 HLTCPGTSQQNGRAXXKLRHILDTVRALLLSAKVPAPFWGEASLHXVHAINXIPSAVIHN 1979
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 1980 QTPYERLF 1987
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 108 bits (270), Expect(2) = 5e-32
Identities = 53/109 (48%), Positives = 74/109 (67%)
Frame = +3
Query: 24 NCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT* 203
+C C+L K ALPFN+S +SS+ FDLIHS++W + V TKGG+RY+V FIDD++ Y
Sbjct: 512 DCSGCKLAKFSALPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCW 571
Query: 204 LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSFLDSL 350
+YL+ RSE + + AF+ ++KT + VIK FR D EYTS+ F L
Sbjct: 572 VYLMKHRSEFFEIYAAFRALIKTQHSAVIKCFRCDLGGEYTSNKFCQML 620
Score = 58.5 bits (140), Expect(2) = 5e-32
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SC T QNG AE +H+HI +T RSLL+SA + FWGEA +TAV IN S S +
Sbjct: 630 SCTDTPEQNGVAERKHRHIVETARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLS 689
Query: 559 LYKVLY 576
++ LY
Sbjct: 690 PFEKLY 695
Score = 40.4 bits (93), Expect(3) = 2e-12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -2
Query: 1466 NDVIRPIDVVLDGTNYNVWAQQMSVFLIGRWFWHYVTGKNGTPRLT 1329
+D ++ + V LDG NY+ W+ M FL G+ W YV+G P+ T
Sbjct: 6 DDSLQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSGTYVVPKNT 51
Score = 40.4 bits (93), Expect(3) = 2e-12
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 1299 ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCSSDLALQFQLESKLYHMH 1120
E+++ KI++W N SI + L K+ K W+ L + S+ A Q+QLE+ + +H
Sbjct: 63 EANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFT-QSNFAKQYQLENDIRALH 121
Query: 1119 QE 1114
Q+
Sbjct: 122 QK 123
Score = 40.0 bits (92), Expect(3) = 2e-12
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = -3
Query: 1000 RDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALTKLIFEETR 863
R+ + + + +++DFE R S+LHRSP ++++ +++L+ EE R
Sbjct: 159 REQQRLVQFLTALRSDFEGLRGSILHRSPLPSVDSVVSELLAEEIR 204
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 105 bits (263), Expect(2) = 1e-31
Identities = 47/108 (43%), Positives = 74/108 (68%)
Frame = +3
Query: 27 CVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*L 206
C C+LGK V LP+ S SS FDL+HS++W + P+KGG Y+V+F+DDYS YT +
Sbjct: 357 CKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSKGGHNYYVIFVDDYSRYTWI 416
Query: 207 YLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSFLDSL 350
Y + RS+L+ +++F +++ T F+ I++FRSD+ EY S++F + L
Sbjct: 417 YFMKHRSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGEYMSNAFREFL 464
Score = 60.1 bits (144), Expect(2) = 1e-31
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SCP QNG AE +H+HI +T R+LLI++ + FW EA TAVY IN + S + ++
Sbjct: 474 SCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAISTAVYLINMQPSSSLQGRS 533
Query: 559 LYKVLY 576
+VL+
Sbjct: 534 PGEVLF 539
>emb|CAN71436.1| hypothetical protein VITISV_039529 [Vitis vinifera]
Length = 1169
Score = 104 bits (260), Expect(2) = 1e-31
Identities = 50/99 (50%), Positives = 72/99 (72%)
Frame = +3
Query: 42 LGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*LYLLHD 221
LGK LPFN S+ IS + F+LIHS++W + V + GG+RYFV+FIDDYS Y+ ++ +
Sbjct: 445 LGKQPXLPFNNSESISKSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKS 504
Query: 222 RSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
RSE+L + F ++V+T F++ IK FRSDNA+EYT +F
Sbjct: 505 RSEILSIYSNFAKMVETQFSKRIKTFRSDNALEYTQHAF 543
Score = 60.8 bits (146), Expect(2) = 1e-31
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNG AE + +HI DTVR+LL+ + FWGE ++ ++IN+ S +I N
Sbjct: 555 HLTCPGTSQQNGXAERKLRHILDTVRALLLXXKIPAPFWGEXSLHXXHAINRIPSAVIHN 614
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 615 QTPYERLF 622
Score = 61.6 bits (148), Expect(2) = 3e-13
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E DV F RM +S + IL+W NT +PSI +LL F + K+AW+ L +Y+ +
Sbjct: 6 KGASEEDVVFLSRMIEWDSHNHMILTWIRNTFIPSISNLLGSFDDAKSAWBMLTKRYSTT 65
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
++++QL +L+ + QE GQSI+ + + W
Sbjct: 66 HG-SMKYQLVVELHQLRQEPGQSINDYYDQLRFIW 99
Score = 42.4 bits (98), Expect(2) = 3e-13
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ DP ++ + +AS RD + +M + DFE R LL+ +P +L+ +
Sbjct: 100 DQIDLSDPIWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNCNPAPSLDTXVN 159
Query: 886 KLIFEETRQKT 854
+L+ EE T
Sbjct: 160 ELVREEAXLAT 170
>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 88.2 bits (217), Expect(2) = 2e-30
Identities = 39/80 (48%), Positives = 60/80 (75%)
Frame = +3
Query: 99 FDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*LYLLHDRSELLDTFRAFQRVVKT*F 278
F+LIHS++W + V + GG+RYFV+FIDDYS Y+ ++ + RSE+L + F ++++T F
Sbjct: 812 FELIHSDVWEPSPVASIGGSRYFVIFIDDYSRYSWIFPMKSRSEILSIYNNFAKMIETQF 871
Query: 279 NRVIKVFRSDNAMEYTSSSF 338
++ IK FRSDNA+EYT +F
Sbjct: 872 SKRIKTFRSDNALEYTQHAF 891
Score = 73.9 bits (180), Expect(2) = 2e-30
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTVR+LL+SA + FWGEAA+ AV++IN+ S +I N
Sbjct: 903 HLTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAALHAVHAINRIPSAVIHN 962
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 963 QTPYERLF 970
Score = 62.0 bits (149), Expect(3) = 2e-21
Identities = 34/95 (35%), Positives = 57/95 (60%)
Frame = -1
Query: 1350 KWYTETDVAFEERMEV*ESSHCKILSWFINTSVPSIQSLLPKFRNVKTAWEFLANQYNCS 1171
K +E + F RM +S + IL+W NTS+PSI +L+ F + K+AW+ LA +Y+ +
Sbjct: 372 KGASEGNAVFLNRMIEWDSHNHMILTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTT 431
Query: 1170 SDLALQFQLESKLYHMHQELGQSIS*LFFTCK*YW 1066
+L++QL +L+ + QE GQSI+ + + W
Sbjct: 432 HG-SLKYQLVVELHQLRQEPGQSINDYYDQLRFIW 465
Score = 48.9 bits (115), Expect(3) = 2e-21
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = -3
Query: 1066 DQLS*VDPSFSNEASVKLFASYRDSSQFIHLMMGIQNDFETTRASLLHRSPRQTLENALT 887
DQ+ P+++ + + +AS RD + +M + DFE R LL+RSP +L+ A+
Sbjct: 466 DQIDLSYPTWTCSKNAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNRSPAPSLDTAVN 525
Query: 886 KLIFEETRQKT 854
+L+ EE R T
Sbjct: 526 ELVREEARLAT 536
Score = 40.4 bits (93), Expect(3) = 2e-21
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 1454 RPIDVVLDGT-NYNVWAQQMSVFLIGRWFWHYVT 1356
RPI+ +L+G NY W+Q M FL GR WHY T
Sbjct: 331 RPINTILEGNKNYLSWSQAMRSFLKGRMLWHYCT 364
>emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera]
Length = 1318
Score = 97.8 bits (242), Expect(2) = 2e-29
Identities = 46/98 (46%), Positives = 70/98 (71%)
Frame = +3
Query: 45 GKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*LYLLHDR 224
GK LPFN S+ IS++ F+LIHS++W + + + GG+RYFV+FIDDYS Y+ ++ + R
Sbjct: 478 GKQPTLPFNNSESISNSIFELIHSDVWGPSPIASIGGSRYFVVFIDDYSRYSWIFPMKSR 537
Query: 225 SELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
E+L + F ++ +T F++ IK FRSDNA+EYT +F
Sbjct: 538 FEILPIYSNFAKMDETQFSKRIKTFRSDNALEYTQYAF 575
Score = 60.8 bits (146), Expect(2) = 2e-29
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T Q RAE + +HI DTV +LL+SA + FWGE + A+++IN+ S +I N
Sbjct: 587 HLTCPGTSQQKCRAERKLRHILDTVCALLLSAKVPVPFWGEVGLHAIHAINRIPSAVIHN 646
Query: 553 KTLYKVLY 576
+T Y+ L+
Sbjct: 647 QTPYERLF 654
>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
Length = 1054
Score = 96.3 bits (238), Expect(2) = 4e-29
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +3
Query: 21 LNCVPCQLGKHVALPFNKS-DFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWY 197
L+C CQLGKH F++S + S + F L+HS+IW + V + G RYFV FIDDYS
Sbjct: 274 LDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSRC 333
Query: 198 T*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
T ++L+ DRSEL F++F ++ F I+ FRSDNA+EY SS F
Sbjct: 334 TWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQF 380
Score = 61.2 bits (147), Expect(2) = 4e-29
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SCPYT QNG AE +++H+ +T R+LLI + + FWG+A +++ Y IN+ S I N+
Sbjct: 394 SCPYTPQQNGVAERKNRHLIETARTLLIESHVPLRFWGDAVLSSCYLINRMPSSSIQNQV 453
Query: 559 LYKVLY 576
+ +L+
Sbjct: 454 PHSILF 459
>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
Length = 1775
Score = 96.3 bits (238), Expect(2) = 5e-29
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +3
Query: 21 LNCVPCQLGKHVALPFNKS-DFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWY 197
L+C CQLGKH F++S + S + F L+HS+IW + V + G RYFV FIDDYS
Sbjct: 513 LDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSKC 572
Query: 198 T*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
T ++L+ DRSEL F++F ++ F I+ FRSDNA+EY SS F
Sbjct: 573 TWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQF 619
Score = 60.8 bits (146), Expect(2) = 5e-29
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
+CPYT QNG AE +++H+ +T R+LL+ + + FWG+A +T+ Y IN+ S I N+
Sbjct: 633 TCPYTPQQNGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQNQV 692
Query: 559 LYKVLY 576
+ +L+
Sbjct: 693 PHSILF 698
>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 97.8 bits (242), Expect(2) = 2e-28
Identities = 47/104 (45%), Positives = 69/104 (66%)
Frame = +3
Query: 27 CVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*L 206
C C+LGK V LP+ S S++ F L+HS++W A +KGG RY+V+F+DD+S YT +
Sbjct: 670 CKGCKLGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWI 729
Query: 207 YLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSF 338
Y + RSEL +++F +V T F+ IK FRSD+ EY S++F
Sbjct: 730 YFMKHRSELYQVYKSFASMVHTQFSTSIKNFRSDSGGEYLSNAF 773
Score = 57.0 bits (136), Expect(2) = 2e-28
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SCP QNG AE +H+HI +T R+LLI++ + FW EA T+VY IN + S ++ ++
Sbjct: 787 SCPGAHAQNGVAERKHRHIIETARTLLIASHVPPHFWAEAVSTSVYLINLQPSSILQGRS 846
>emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]
Length = 1174
Score = 86.7 bits (213), Expect(2) = 1e-27
Identities = 40/80 (50%), Positives = 60/80 (75%)
Frame = +3
Query: 99 FDLIHSNIWRLALVPTKGGARYFVLFIDDYSWYT*LYLLHDRSELLDTFRAFQRVVKT*F 278
F+LIHS++W + V + GG+RYFV+FIDDYS Y+ ++ + RSE+L + F ++V+T F
Sbjct: 357 FELIHSDVWGPSPVASIGGSRYFVIFIDDYSRYSWIFPMKSRSEILPIYSNFAKMVETQF 416
Query: 279 NRVIKVFRSDNAMEYTSSSF 338
++ IK FRSDNA+EYT +F
Sbjct: 417 SKRIKTFRSDNALEYTQYAF 436
Score = 65.5 bits (158), Expect(2) = 1e-27
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +1
Query: 373 HYSCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISN 552
H +CP T QNGRAE + +HI DTV +LL+ A + FWGEA + AV++IN+ S +I N
Sbjct: 448 HLTCPGTSQQNGRAERKLRHILDTVHALLLYAKVPAPFWGEAGLHAVHAINRIPSAVIHN 507
Query: 553 KTLYKVLY 576
+ Y+ L+
Sbjct: 508 QIPYERLF 515
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 87.0 bits (214), Expect(2) = 2e-27
Identities = 44/112 (39%), Positives = 68/112 (60%)
Frame = +3
Query: 18 PLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDDYSWY 197
P C CQL K+ LP+++++ SS DLIH ++W + + + G Y+V+FIDDYS +
Sbjct: 438 PSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSRF 497
Query: 198 T*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSFLDSLK 353
T LY L +S+ D F FQ+ V+ + IKVF+SD E+T++ F L+
Sbjct: 498 TWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLR 549
Score = 64.7 bits (156), Expect(2) = 2e-27
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SCPYT QNGRAE +H+H+ +T +LL + LS FW +A TA Y IN+ +P++ K+
Sbjct: 558 SCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGGKS 617
Query: 559 LYKVLY 576
+++LY
Sbjct: 618 PFELLY 623
>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 86.7 bits (213), Expect(2) = 1e-26
Identities = 47/115 (40%), Positives = 65/115 (56%)
Frame = +3
Query: 6 VTFEPLNCVPCQLGKHVALPFNKSDFISSTSFDLIHSNIWRLALVPTKGGARYFVLFIDD 185
++F+ +C C LGKH F KS I FDL+HS++W V ++ +YFV FI++
Sbjct: 479 ISFDHTSCEACILGKHCKSVFPKSLTIYEKCFDLVHSDVWTSPCV-SRDNNKYFVTFINE 537
Query: 186 YSWYT*LYLLHDRSELLDTFRAFQRVVKT*FNRVIKVFRSDNAMEYTSSSFLDSL 350
S YT + LL + + + F F+ V FN IKVFR+DN EYTS F D L
Sbjct: 538 KSKYTWITLLPSKDRVFEAFTNFETYVTNQFNAKIKVFRTDNGGEYTSQKFRDHL 592
Score = 62.4 bits (150), Expect(2) = 1e-26
Identities = 27/68 (39%), Positives = 46/68 (67%)
Frame = +1
Query: 379 SCPYTF*QNGRAECRHKHIFDTVRSLLISAALSKSFWGEAAITAVYSINQESSPMISNKT 558
SCPYT QNG AE +++H+ + RS++ ++ K FWG+A +TA Y IN+ + ++S+ +
Sbjct: 602 SCPYTPQQNGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLINRTPTKVLSDLS 661
Query: 559 LYKVLYKT 582
++VL T
Sbjct: 662 PFEVLNNT 669