BLASTX nr result

ID: Sinomenium21_contig00038475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00038475
         (344 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375925.1| hypothetical protein POPTR_0013s06400g [Popu...   100   3e-19
ref|XP_002319735.2| hypothetical protein POPTR_0013s06400g [Popu...   100   3e-19
ref|XP_006604274.1| PREDICTED: F-box protein SKIP24-like isoform...    97   2e-18
ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like isoform...    97   2e-18
gb|AFK35084.1| unknown [Lotus japonicus]                               97   2e-18
gb|AFK35078.1| unknown [Lotus japonicus]                               97   2e-18
ref|XP_007161908.1| hypothetical protein PHAVU_001G107700g [Phas...    96   7e-18
ref|XP_007029925.1| F-box family protein, putative isoform 1 [Th...    96   7e-18
ref|XP_006417655.1| hypothetical protein EUTSA_v10008513mg [Eutr...    93   3e-17
ref|XP_006304036.1| hypothetical protein CARUB_v10009806mg [Caps...    93   4e-17
ref|XP_006304035.1| hypothetical protein CARUB_v10009806mg [Caps...    93   4e-17
ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...    91   1e-16
ref|XP_004493250.1| PREDICTED: F-box protein SKIP24-like isoform...    90   4e-16
ref|XP_004493249.1| PREDICTED: F-box protein SKIP24-like isoform...    90   4e-16
ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula] g...    90   4e-16
ref|XP_007203436.1| hypothetical protein PRUPE_ppa021739mg, part...    89   6e-16
gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]             89   6e-16
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...    89   6e-16
ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula] g...    89   6e-16
ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    89   6e-16

>ref|XP_006375925.1| hypothetical protein POPTR_0013s06400g [Populus trichocarpa]
           gi|550325098|gb|ERP53722.1| hypothetical protein
           POPTR_0013s06400g [Populus trichocarpa]
          Length = 245

 Score =  100 bits (248), Expect = 3e-19
 Identities = 46/85 (54%), Positives = 64/85 (75%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WR+I EMGI+NSKL+YKDLCCISI+CRRL+RL  E+SLW+ LL+ DFP    ++ 
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSP--NQQ 61

Query: 270 VPSSSQPLQFPYKTLYKARFERDKA 344
            P+ +       K+ YK +FER+K+
Sbjct: 62  NPNPNNSTSASAKSTYKIKFEREKS 86


>ref|XP_002319735.2| hypothetical protein POPTR_0013s06400g [Populus trichocarpa]
           gi|550325097|gb|EEE95658.2| hypothetical protein
           POPTR_0013s06400g [Populus trichocarpa]
          Length = 239

 Score =  100 bits (248), Expect = 3e-19
 Identities = 46/85 (54%), Positives = 64/85 (75%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WR+I EMGI+NSKL+YKDLCCISI+CRRL+RL  E+SLW+ LL+ DFP    ++ 
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSP--NQQ 61

Query: 270 VPSSSQPLQFPYKTLYKARFERDKA 344
            P+ +       K+ YK +FER+K+
Sbjct: 62  NPNPNNSTSASAKSTYKIKFEREKS 86


>ref|XP_006604274.1| PREDICTED: F-box protein SKIP24-like isoform X2 [Glycine max]
          Length = 238

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/85 (57%), Positives = 63/85 (74%)
 Frame = +3

Query: 87  LLPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDR 266
           LLPDE+WRRI E+GIE++  SYKDLCC+SI+CRRL+RL  E+ LW  LL  D+PQ+   +
Sbjct: 5   LLPDELWRRILEIGIESNGFSYKDLCCVSISCRRLHRLSSEEPLWNRLLFSDYPQS---Q 61

Query: 267 NVPSSSQPLQFPYKTLYKARFERDK 341
           + PSSS       K+LY+ RFERDK
Sbjct: 62  SHPSSSSS-SSSSKSLYRLRFERDK 85


>ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like isoform X1 [Glycine max]
          Length = 267

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/85 (57%), Positives = 63/85 (74%)
 Frame = +3

Query: 87  LLPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDR 266
           LLPDE+WRRI E+GIE++  SYKDLCC+SI+CRRL+RL  E+ LW  LL  D+PQ+   +
Sbjct: 5   LLPDELWRRILEIGIESNGFSYKDLCCVSISCRRLHRLSSEEPLWNRLLFSDYPQS---Q 61

Query: 267 NVPSSSQPLQFPYKTLYKARFERDK 341
           + PSSS       K+LY+ RFERDK
Sbjct: 62  SHPSSSSS-SSSSKSLYRLRFERDK 85


>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/84 (55%), Positives = 58/84 (69%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+WRRI E+G+E+S  +YKDLCCISI+CRR +RL  +DSLW  LL+ DFP       
Sbjct: 16  LPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSL----- 70

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
            P SS       K+LYK RFERDK
Sbjct: 71  TPPSSSSTSPSAKSLYKLRFERDK 94


>gb|AFK35078.1| unknown [Lotus japonicus]
          Length = 257

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/84 (55%), Positives = 58/84 (69%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+WRRI E+G+E+S  +YKDLCCISI+CRR +RL  +DSLW  LL+ DFP       
Sbjct: 16  LPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSL----- 70

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
            P SS       K+LYK RFERDK
Sbjct: 71  TPPSSSSTSPSAKSLYKLRFERDK 94


>ref|XP_007161908.1| hypothetical protein PHAVU_001G107700g [Phaseolus vulgaris]
           gi|561035372|gb|ESW33902.1| hypothetical protein
           PHAVU_001G107700g [Phaseolus vulgaris]
          Length = 231

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/86 (55%), Positives = 60/86 (69%)
 Frame = +3

Query: 84  ALLPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFD 263
           + LP+E+WRRI E+GIE+S  SYKDLCC+SI+CRRL+RL  ED +W  LL+ D+PQ    
Sbjct: 2   SFLPEELWRRILEIGIESSGFSYKDLCCVSISCRRLHRLSSEDLIWNLLLSADYPQ---- 57

Query: 264 RNVPSSSQPLQFPYKTLYKARFERDK 341
              P SS       K+LYK RFERDK
Sbjct: 58  ---PHSSS--SSSSKSLYKLRFERDK 78


>ref|XP_007029925.1| F-box family protein, putative isoform 1 [Theobroma cacao]
           gi|508718530|gb|EOY10427.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 246

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/84 (57%), Positives = 62/84 (73%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LPDE+WR+I E+GI++S   +KDLC ISI+CRRL+RL  EDSLW  LL++DFP  I   +
Sbjct: 7   LPDELWRKILEIGIKSSNFIFKDLCSISISCRRLHRLSNEDSLWSHLLSVDFPNQI--SS 64

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
            PSSS P     K+LYK RFER++
Sbjct: 65  PPSSSSP-----KSLYKIRFERER 83


>ref|XP_006417655.1| hypothetical protein EUTSA_v10008513mg [Eutrema salsugineum]
           gi|557095426|gb|ESQ36008.1| hypothetical protein
           EUTSA_v10008513mg [Eutrema salsugineum]
          Length = 262

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/84 (53%), Positives = 59/84 (70%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WR+I E+G+++S  SY+DLCCISI+ RRL RL  +DSLW+ LL LDFP  I    
Sbjct: 6   IPDELWRKILEIGVKSSTFSYRDLCCISISSRRLCRLSCDDSLWLLLLFLDFPSYI---- 61

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
              SS   Q P K +Y+ RFER+K
Sbjct: 62  --DSSSSSQSPTKFIYRTRFEREK 83


>ref|XP_006304036.1| hypothetical protein CARUB_v10009806mg [Capsella rubella]
           gi|482572747|gb|EOA36934.1| hypothetical protein
           CARUB_v10009806mg [Capsella rubella]
          Length = 273

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WRRI E+G+++S  SYKDLCCISI+ RRL RL  +DSLW  LL  DFP       
Sbjct: 6   IPDELWRRILEVGVKSSSFSYKDLCCISISSRRLRRLSSDDSLWDLLLFHDFPTPTI--- 62

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
              S+   Q P K +Y+ RFERDK
Sbjct: 63  ---SASSSQLPTKFIYRTRFERDK 83


>ref|XP_006304035.1| hypothetical protein CARUB_v10009806mg [Capsella rubella]
           gi|482572746|gb|EOA36933.1| hypothetical protein
           CARUB_v10009806mg [Capsella rubella]
          Length = 314

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WRRI E+G+++S  SYKDLCCISI+ RRL RL  +DSLW  LL  DFP       
Sbjct: 6   IPDELWRRILEVGVKSSSFSYKDLCCISISSRRLRRLSSDDSLWDLLLFHDFPTPTI--- 62

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
              S+   Q P K +Y+ RFERDK
Sbjct: 63  ---SASSSQLPTKFIYRTRFERDK 83


>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDEIWR+I E+G+++S  SYKDLCCISI+ RRL RL  +DSLW  LL LDFP  I    
Sbjct: 6   IPDEIWRKIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTHIV--- 62

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
              S+   Q P K +Y+ RFER+K
Sbjct: 63  ---SASSSQSPSKFIYRTRFEREK 83


>ref|XP_004493250.1| PREDICTED: F-box protein SKIP24-like isoform X2 [Cicer arietinum]
           gi|502107401|ref|XP_004493251.1| PREDICTED: F-box
           protein SKIP24-like isoform X3 [Cicer arietinum]
          Length = 242

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+W RI E+GI  S LSYKDLCCISI+CR L+RL  +DSLW  LL+ +FP       
Sbjct: 4   LPNELWSRILEIGIGKSGLSYKDLCCISISCRLLHRLSSDDSLWNHLLSSEFPL------ 57

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             S S P     K+LYK RFERDK
Sbjct: 58  --SPSPPSNSSSKSLYKFRFERDK 79


>ref|XP_004493249.1| PREDICTED: F-box protein SKIP24-like isoform X1 [Cicer arietinum]
          Length = 246

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+W RI E+GI  S LSYKDLCCISI+CR L+RL  +DSLW  LL+ +FP       
Sbjct: 4   LPNELWSRILEIGIGKSGLSYKDLCCISISCRLLHRLSSDDSLWNHLLSSEFPL------ 57

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             S S P     K+LYK RFERDK
Sbjct: 58  --SPSPPSNSSSKSLYKFRFERDK 79


>ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula]
           gi|357508969|ref|XP_003624773.1| F-box protein SKIP24
           [Medicago truncatula] gi|355499776|gb|AES80979.1| F-box
           protein SKIP24 [Medicago truncatula]
           gi|355499788|gb|AES80991.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 135

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+W RI E+GIE S LSYKDLCCISI+C  L+RL  +DSLW  L++ DFP       
Sbjct: 4   LPEELWSRILEIGIEKSSLSYKDLCCISISCHLLHRLSSDDSLWNGLISSDFPS------ 57

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             SS+  L    K+LYK R ER+K
Sbjct: 58  --SSASSLASSSKSLYKLRLEREK 79


>ref|XP_007203436.1| hypothetical protein PRUPE_ppa021739mg, partial [Prunus persica]
           gi|462398967|gb|EMJ04635.1| hypothetical protein
           PRUPE_ppa021739mg, partial [Prunus persica]
          Length = 204

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/84 (51%), Positives = 57/84 (67%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP+E+WRRI E+G++   +SYKDLCC+SI+ RRL+RLC ED LW  LL+ DFP   F  +
Sbjct: 4   LPEELWRRILEIGVQRRGVSYKDLCCLSISSRRLHRLCDEDFLWSHLLSSDFP-PFFSPS 62

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             S +       K LYK R+ERD+
Sbjct: 63  SSSITSAHSSSCKYLYKLRYERDR 86


>gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]
          Length = 313

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WR+I E+G+++S  SYKDLCCISI+ RRL RL  +DSLW  LL  DFP      +
Sbjct: 6   IPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFP-----NH 60

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
           + S+S   + P K +Y  RFER+K
Sbjct: 61  IVSASSSSESPTKFIYMTRFEREK 84


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/84 (54%), Positives = 57/84 (67%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP E+W +I E+GI++  LSYKDLCCISI+CR L+RL  EDSLW  LL+ DFP +    +
Sbjct: 4   LPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSS 63

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             SS        K+LYK RFERDK
Sbjct: 64  SSSS--------KSLYKLRFERDK 79


>ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499773|gb|AES80976.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 241

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/84 (54%), Positives = 57/84 (67%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           LP E+W +I E+GI++  LSYKDLCCISI+CR L+RL  EDSLW  LL+ DFP +    +
Sbjct: 4   LPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSS 63

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
             SS        K+LYK RFERDK
Sbjct: 64  SSSS--------KSLYKLRFERDK 79


>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +3

Query: 90  LPDEIWRRIFEMGIENSKLSYKDLCCISITCRRLNRLCKEDSLWITLLTLDFPQTIFDRN 269
           +PDE+WR+I E+G+++S  SYKDLCCISI+ RRL RL  +DSLW  LL  DFP      +
Sbjct: 6   IPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFP-----NH 60

Query: 270 VPSSSQPLQFPYKTLYKARFERDK 341
           + S+S   + P K +Y  RFER+K
Sbjct: 61  IVSASSSSESPTKFIYMTRFEREK 84


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