BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00038412
         (522 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...    95   9e-18
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...    77   2e-12
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [A...    74   2e-11
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...    71   1e-10
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...    68   1e-09
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...    64   2e-08
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...    64   2e-08
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...    64   2e-08
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...    64   2e-08
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...    64   2e-08
ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, part...    62   6e-08
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu...    60   3e-07
gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial...    60   4e-07
ref|XP_006400150.1| hypothetical protein EUTSA_v10012836mg [Eutr...    59   7e-07
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...    58   2e-06
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...    58   2e-06
ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrat...    57   2e-06

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 58/146 (39%), Positives = 87/146 (59%)
 Frame = +3

Query: 84  FLSPQSLPSNANISTLSSSTHFQNPLKTPPKQLHNFNKPLKILASHTDITPSPNSIEKPQ 263
           FLS   +P+++   + S+S    +     P+++H+F KP  I A+ T  T          
Sbjct: 6   FLSLSPIPNHSQFPSNSNSLSNSSIRILNPQRIHSF-KPPPISATTTATT---------- 54

Query: 264 PSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNRVQGAERT 443
            ++P+ S  S+    T+  IK+P+APWM GPLLL  NEVL+LS  R K+      GAE+ 
Sbjct: 55  -NHPDHSISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSA-GAEKP 112

Query: 444 DLSLTDKISGGRGRRAMRRIVESITK 521
           D SLT+K+SGGRG +AM++I++SI K
Sbjct: 113 DRSLTEKVSGGRGAKAMKKIMQSIVK 138


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
           gi|462413463|gb|EMJ18512.1| hypothetical protein
           PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
 Frame = +3

Query: 120 ISTLSSSTHFQNPLKTPPKQLHNFNKPLKILASHTDITPSP-NSIEKPQPSN-------- 272
           +STL + TH       PP   H++N     L S     P P N I    P++        
Sbjct: 10  LSTLPNITHHLPSHSNPP--FHSYNPISSALNSKPPQNPKPTNPIPSKSPNSLSLSSTTT 67

Query: 273 -PNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNRVQGAERTDL 449
            PN    SE   ST+  IK P+APWM GPLLL  +EV++ S  R K+  N  + AE+ D 
Sbjct: 68  TPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAK-AEKPDT 126

Query: 450 SLTDKISGGRGRRAMRRIVESITK 521
            L  K+ G RG +A+++IV+SI +
Sbjct: 127 VLAGKLVGIRGDKAIKQIVQSIER 150


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
           gi|223544130|gb|EEF45655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 742

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = +3

Query: 237 SPNSIEKPQ---PSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTK 407
           S N+ + P+     N  F+ LS     +N  IKVP+APWM GPLLL  +E++NLS  R K
Sbjct: 27  SLNNAQNPKFATNKNTEFTLLSVPNSQSNAPIKVPTAPWMKGPLLLQPHELINLSKPRNK 86

Query: 408 RGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              N     E++D  LT K SG RG++AM +IV+SI
Sbjct: 87  NSSNNA-NIEKSDKVLTGKESGVRGKKAMEKIVKSI 121


>ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
           gi|548844430|gb|ERN04039.1| hypothetical protein
           AMTR_s00079p00185530 [Amborella trichopoda]
          Length = 886

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
 Frame = +3

Query: 93  PQSLPSNANISTLSSSTHFQNPLKTPPKQLHNFNKPLKILASHTDIT---------PSPN 245
           P    S  N +T +S  +   PLKT PK+    N P K   + +++          P  N
Sbjct: 84  PPCKDSYFNGATPTSPVNVPLPLKTIPKKQFEMNLPFKENDTISELPWQKMHNLSDPIGN 143

Query: 246 SIEKPQPSN--------------PNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVL 383
           S     P+N              P  SFL +     ++ +K+P+APWM GPLLLP+++VL
Sbjct: 144 SPPSKGPANGLVRPEKTKGQQGLPTLSFLRKI--GHHNEVKMPTAPWMRGPLLLPADDVL 201

Query: 384 NLSTLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
           +LS  R K+  N +      D +LT  + GGR + AMR I+E+ITK
Sbjct: 202 DLSKSR-KKSSNEMNS---DDKALTGGVRGGRSKHAMRLIMENITK 243


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 46/135 (34%), Positives = 68/135 (50%)
 Frame = +3

Query: 117 NISTLSSSTHFQNPLKTPPKQLHNFNKPLKILASHTDITPSPNSIEKPQPSNPNFSFLSE 296
           N  TL  S  F +   T   Q ++ N P+K                  +    N  F ++
Sbjct: 24  NQKTLLFSKSFNSKFTTFSSQSNDNNNPIK------------------KVEQCNLEFENQ 65

Query: 297 AFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNRVQGAERTDLSLTDKISGG 476
            + S++  IK P+APWM GPLLL  N+VL+LS  R K+  N  +     D +L+ K+SGG
Sbjct: 66  DYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQNPND-ALSGKVSGG 124

Query: 477 RGRRAMRRIVESITK 521
           RG++AM+ I + I K
Sbjct: 125 RGKKAMKMIYQGIDK 139


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 44/135 (32%), Positives = 66/135 (48%)
 Frame = +3

Query: 117 NISTLSSSTHFQNPLKTPPKQLHNFNKPLKILASHTDITPSPNSIEKPQPSNPNFSFLSE 296
           N  TL  S  F +   +   Q ++ N P+K                       N  F ++
Sbjct: 24  NQKTLLFSKSFNSKFTSFSSQYNDNNNPIK------------------NEEQYNLEFENQ 65

Query: 297 AFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNRVQGAERTDLSLTDKISGG 476
            + S++  IK P+APWM GPLLL  N+ L+LS  R K+  N  +     D +L+ K+SGG
Sbjct: 66  DYGSSSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPND-ALSGKVSGG 124

Query: 477 RGRRAMRRIVESITK 521
           RG++AM+ I + I K
Sbjct: 125 RGKKAMKMIYQGIDK 139


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5
           [Theobroma cacao] gi|508712250|gb|EOY04147.1| maize
           chloroplast splicing factor CRS1, putative isoform 5
           [Theobroma cacao]
          Length = 788

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%)
 Frame = +3

Query: 213 ASHTDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLS 392
           +S  + + +P+   K   S  N S  S +    N  IK+P+APWM GPLLL  +EVLN S
Sbjct: 52  SSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPS 111

Query: 393 TLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              +K+  N    A+  D +L  K SG RG++ M++I+ ++
Sbjct: 112 KSTSKKSSN--SKAKAPDKALFGKESGVRGKKVMKKIIRNV 150


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4
           [Theobroma cacao] gi|508712249|gb|EOY04146.1| maize
           chloroplast splicing factor CRS1, putative isoform 4
           [Theobroma cacao]
          Length = 767

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%)
 Frame = +3

Query: 213 ASHTDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLS 392
           +S  + + +P+   K   S  N S  S +    N  IK+P+APWM GPLLL  +EVLN S
Sbjct: 26  SSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPS 85

Query: 393 TLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              +K+  N    A+  D +L  K SG RG++ M++I+ ++
Sbjct: 86  KSTSKKSSN--SKAKAPDKALFGKESGVRGKKVMKKIIRNV 124


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3
           [Theobroma cacao] gi|508712248|gb|EOY04145.1| maize
           chloroplast splicing factor CRS1, putative isoform 3
           [Theobroma cacao]
          Length = 788

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%)
 Frame = +3

Query: 213 ASHTDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLS 392
           +S  + + +P+   K   S  N S  S +    N  IK+P+APWM GPLLL  +EVLN S
Sbjct: 26  SSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPS 85

Query: 393 TLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              +K+  N    A+  D +L  K SG RG++ M++I+ ++
Sbjct: 86  KSTSKKSSN--SKAKAPDKALFGKESGVRGKKVMKKIIRNV 124


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2
           [Theobroma cacao] gi|508712247|gb|EOY04144.1| maize
           chloroplast splicing factor CRS1, putative isoform 2
           [Theobroma cacao]
          Length = 804

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%)
 Frame = +3

Query: 213 ASHTDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLS 392
           +S  + + +P+   K   S  N S  S +    N  IK+P+APWM GPLLL  +EVLN S
Sbjct: 52  SSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPS 111

Query: 393 TLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              +K+  N    A+  D +L  K SG RG++ M++I+ ++
Sbjct: 112 KSTSKKSSN--SKAKAPDKALFGKESGVRGKKVMKKIIRNV 150


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1
           [Theobroma cacao] gi|508712246|gb|EOY04143.1| maize
           chloroplast splicing factor CRS1, putative isoform 1
           [Theobroma cacao]
          Length = 818

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%)
 Frame = +3

Query: 213 ASHTDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLS 392
           +S  + + +P+   K   S  N S  S +    N  IK+P+APWM GPLLL  +EVLN S
Sbjct: 52  SSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPS 111

Query: 393 TLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESI 515
              +K+  N    A+  D +L  K SG RG++ M++I+ ++
Sbjct: 112 KSTSKKSSN--SKAKAPDKALFGKESGVRGKKVMKKIIRNV 150


>ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, partial [Capsella rubella]
           gi|482555852|gb|EOA20044.1| hypothetical protein
           CARUB_v10000322mg, partial [Capsella rubella]
          Length = 726

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/100 (38%), Positives = 56/100 (56%)
 Frame = +3

Query: 222 TDITPSPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLR 401
           T+ + +PN         P F    E    ++  IKVP+APWM GPLLL  +E+L+     
Sbjct: 45  TNSSLNPNQNPSNAAKTPQFDKFRENRGHSDAAIKVPTAPWMKGPLLLRPDEILDAE--- 101

Query: 402 TKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
            KR K R +  E+T  +L  + SG RGR+AM++IV ++ K
Sbjct: 102 -KRNKPR-KSEEKTFKALNRRESGVRGRKAMKKIVRNVEK 139


>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
           gi|550339039|gb|EEE93652.2| hypothetical protein
           POPTR_0005s15420g [Populus trichocarpa]
          Length = 729

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 21/128 (16%)
 Frame = +3

Query: 201 LKILASHTDITPSPNSIEKPQ------------PS------NPNFSFLSEAFQSTNDT-- 320
           LK  +S+T IT S N   K              PS      N   + L+     +N T  
Sbjct: 8   LKFFSSYTPITSSLNPTTKKHCNTTLNNAQITTPSMFANNNNKELAVLTNPISQSNATTN 67

Query: 321 IKVPSAPWMTGPLLLPSNEVLNLSTLRTKRG-KNRVQGAERTDLSLTDKISGGRGRRAMR 497
           +KVP+ PW+ GPL+L  +E+LNL+  + K+  KN     E+ D +LT K SG RG +AM 
Sbjct: 68  VKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKN--DKIEKDDKALTAKESGVRGNKAMI 125

Query: 498 RIVESITK 521
           +IV+S+ +
Sbjct: 126 QIVKSVER 133


>gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial [Mimulus
           guttatus]
          Length = 702

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
 Frame = +3

Query: 294 EAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKR----GKNRVQ--GAERTDLSL 455
           E    +  TIK P+APWM GPLL+  +E+L     RT++    G+N  +  G    D+ L
Sbjct: 18  EHIPHSRSTIKAPTAPWMNGPLLVKPSEILESRRTRTRKHFAAGRNDGEHTGGGHPDVDL 77

Query: 456 TDKISGGRGRRAMRRIVESITK 521
           T K+ G RG+ AM++I + I K
Sbjct: 78  TGKVGGARGKVAMKKIYKGIEK 99


>ref|XP_006400150.1| hypothetical protein EUTSA_v10012836mg [Eutrema salsugineum]
           gi|557101240|gb|ESQ41603.1| hypothetical protein
           EUTSA_v10012836mg [Eutrema salsugineum]
          Length = 698

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
 Frame = +3

Query: 210 LASHTDITPSPNSIEKPQPSN----PNFSFLSEAFQSTNDTIKVPS-APWMTGPLLLPSN 374
           L +++ + PS N      PSN    P F   SE  + ++  IKVP+ APWM GPLL+  +
Sbjct: 15  LITNSSLNPSRN------PSNASKIPQFDQFSENSRFSDAPIKVPTTAPWMKGPLLIRPD 68

Query: 375 EVLNLSTLRTKRGKNRVQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
           EVL+ S    KR + +    E+T  +L  + SG RG +AM++IV  + K
Sbjct: 69  EVLDTSYRHEKRIRGQ-NAEEKTFKALNRRESGVRGSKAMKKIVRKVEK 116


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568857343|ref|XP_006482226.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +3

Query: 246 SIEKPQPSNPNFSFLSEAFQSTNDTIK-VPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNR 422
           S   P  ++P    L +   S N  IK +P+APWM  P++L  +E++  S  +TK+    
Sbjct: 27  SSSNPNQNSPKTLKLPDIKLSPNAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTKKS--- 83

Query: 423 VQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
               ++TD  LT K SG RG++AM++I+E+I K
Sbjct: 84  ---FKKTDKGLTAKESGVRGKQAMKKIIENIEK 113


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
           gi|557532797|gb|ESR43980.1| hypothetical protein
           CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +3

Query: 246 SIEKPQPSNPNFSFLSEAFQSTNDTIK-VPSAPWMTGPLLLPSNEVLNLSTLRTKRGKNR 422
           S   P  ++P    L +   S N  IK +P+APWM  P++L  +E++  S  +TK+    
Sbjct: 33  SSSNPNQNSPKTLKLPDIKLSPNAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTKKS--- 89

Query: 423 VQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
               ++TD  LT K SG RG++AM++I+E+I K
Sbjct: 90  ---FKKTDKGLTAKESGVRGKQAMKKIIENIEK 119


>ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
           gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 727

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/95 (35%), Positives = 54/95 (56%)
 Frame = +3

Query: 237 SPNSIEKPQPSNPNFSFLSEAFQSTNDTIKVPSAPWMTGPLLLPSNEVLNLSTLRTKRGK 416
           +PN        +P F    E    ++  +KVP+APWM GPLLL  +E+++      KR K
Sbjct: 22  NPNQNPSNAAKSPQFDQFREKRGLSDAAMKVPTAPWMKGPLLLRPDEIVDTE----KRNK 77

Query: 417 NRVQGAERTDLSLTDKISGGRGRRAMRRIVESITK 521
            R +  E+T  +L  + SG RG++AM++IV ++ K
Sbjct: 78  PR-KVEEKTFKALNRRESGVRGKKAMKKIVRNVEK 111