BLASTX nr result
ID: Sinomenium21_contig00038264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00038264
(303 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-l... 62 3e-17
ref|XP_007048817.1| DNA repair and recombination protein pif1, p... 55 2e-14
ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-l... 53 3e-14
ref|XP_007216310.1| hypothetical protein PRUPE_ppa019701mg [Prun... 62 1e-07
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm... 60 2e-07
ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Popu... 60 4e-07
ref|XP_004306279.1| PREDICTED: DNA repair and recombination prot... 56 5e-06
>ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Glycine max]
Length = 516
Score = 62.0 bits (149), Expect(2) = 3e-17
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = -3
Query: 199 LLQGTRRGRRDDQVLQILHH-CYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGLGRDVV 23
LL+G RRG D Q L+ L + C SE + + +L+P N+DV+RVNDERLR L +DVV
Sbjct: 250 LLEGIRRGESDPQDLEFLENLCLGSSECDHDPSIVQLFPLNKDVERVNDERLRSLQKDVV 309
Query: 22 KYEALD 5
Y A+D
Sbjct: 310 VYRAVD 315
Score = 52.0 bits (123), Expect(2) = 3e-17
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -1
Query: 291 FAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG 187
+AFEAECWNR+FDLQV L++VFRQSD L+ +G
Sbjct: 219 YAFEAECWNRSFDLQVELTRVFRQSDYGLTRLLEG 253
>ref|XP_007048817.1| DNA repair and recombination protein pif1, putative [Theobroma
cacao] gi|508701078|gb|EOX92974.1| DNA repair and
recombination protein pif1, putative [Theobroma cacao]
Length = 475
Score = 55.5 bits (132), Expect(2) = 2e-14
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = -3
Query: 211 RTIDLLQGTRRGRRDDQVLQILHHCYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGLGR 32
R I LLQG RRG D + LQ L SE P V RLYPR +DV +VN+E+++ L
Sbjct: 240 RFIKLLQGVRRGNSDPEDLQFLKQSCSASEPH-PSAV-RLYPRIDDVNKVNEEKMKALSE 297
Query: 31 DVVKYEALDK 2
+ V YEA+D+
Sbjct: 298 EQVIYEAIDR 307
Score = 48.9 bits (115), Expect(2) = 2e-14
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1
Query: 303 SEKEFAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG 187
S KEFAFEA+CW+ +FD+QV L+++FRQS+ +G
Sbjct: 209 SRKEFAFEADCWDASFDIQVELTKIFRQSENRFIKLLQG 247
>ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Solanum
lycopersicum]
Length = 498
Score = 52.8 bits (125), Expect(2) = 3e-14
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = -3
Query: 205 IDLLQGTRRGRRDDQVLQILHHCYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGLGRDV 26
I LLQG R+G+ D + L++L C S+ E +LYPR EDV RVN ERL L +
Sbjct: 241 IKLLQGIRKGKYDSEDLKLLDQCC--SKVEPDSSAVQLYPRIEDVSRVNAERLDCLDEVL 298
Query: 25 VKYEALD 5
Y+ALD
Sbjct: 299 FNYQALD 305
Score = 50.8 bits (120), Expect(2) = 3e-14
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -1
Query: 300 EKEFAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG 187
+KEFAFEA+CWN +FD Q+ L +FRQSD +L +G
Sbjct: 209 QKEFAFEADCWNASFDEQIELKTIFRQSDAQLIKLLQG 246
>ref|XP_007216310.1| hypothetical protein PRUPE_ppa019701mg [Prunus persica]
gi|462412460|gb|EMJ17509.1| hypothetical protein
PRUPE_ppa019701mg [Prunus persica]
Length = 549
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = -3
Query: 214 PRTIDLLQGTRRGRRDDQVLQILHHCYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGLG 35
P+ I LLQG RRG D + L++L K+E + V +LYPRNEDV RVN RL LG
Sbjct: 240 PQLIKLLQGIRRGESDPEDLKLLEQSCSKAEPD--PTVVQLYPRNEDVNRVNSSRLASLG 297
Query: 34 RDVVKYEALD 5
++V Y A+D
Sbjct: 298 NELVVYTAVD 307
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = -1
Query: 297 KEFAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG 187
KEFAFEAECW+ +FDLQV L++VFRQSDP+L +G
Sbjct: 212 KEFAFEAECWDSSFDLQVNLTKVFRQSDPQLIKLLQG 248
>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
gi|223540444|gb|EEF42013.1| conserved hypothetical
protein [Ricinus communis]
Length = 512
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = -3
Query: 214 PRTIDLLQGTRRGRRDDQVLQILHHCYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGLG 35
P+ I+LLQG R+G D + L++L C +E + P V RLYPR EDV +VN++RL+ LG
Sbjct: 225 PQLINLLQGIRKGVIDTEDLKLLEQCCSNNEPD-PSAV-RLYPRIEDVNKVNEKRLKSLG 282
Query: 34 RDVVKYEALD 5
+V Y+A+D
Sbjct: 283 EKIVAYKAVD 292
>ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Populus trichocarpa]
gi|550334512|gb|ERP58419.1| hypothetical protein
POPTR_0007s09900g [Populus trichocarpa]
Length = 540
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -1
Query: 303 SEKEFAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG--QGEV-AETIKSFKFYITVT 133
S KEFAFEA+CWN +FDLQV L+QVFRQSDP L +G +GE AE ++ + ++
Sbjct: 257 SGKEFAFEADCWNASFDLQVELTQVFRQSDPRLIKMLQGIRKGETDAEDLQLLEESCSMN 316
Query: 132 SNQSL 118
SL
Sbjct: 317 KQDSL 321
Score = 55.5 bits (132), Expect = 8e-06
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = -3
Query: 214 PRTIDLLQGTRRGRRDDQVLQILHH-CYIKSEFELPVQVPRLYPRNEDVKRVNDERLRGL 38
PR I +LQG R+G D + LQ+L C + + L V LYPR DV++VN+ER++ L
Sbjct: 287 PRLIKMLQGIRKGETDAEDLQLLEESCSMNKQDSLVVW---LYPRINDVEKVNEERMKSL 343
Query: 37 GRDVVKYEALD 5
G V Y A D
Sbjct: 344 GESTVTYAAAD 354
>ref|XP_004306279.1| PREDICTED: DNA repair and recombination protein pif1,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 515
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -1
Query: 297 KEFAFEAECWNRTFDLQVGLSQVFRQSDPELSTCFKG 187
+EFAFEA+CWN +FDLQV L++VFRQSDP L G
Sbjct: 211 REFAFEADCWNSSFDLQVSLTKVFRQSDPRLIKLLNG 247