BLASTX nr result
ID: Sinomenium21_contig00038142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00038142
(254 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
ref|XP_007047758.1| Pentatricopeptide repeat (PPR) superfamily p... 85 9e-15
ref|XP_004306479.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_007226363.1| hypothetical protein PRUPE_ppa022421mg [Prun... 84 2e-14
gb|EYU30924.1| hypothetical protein MIMGU_mgv1a001068mg [Mimulus... 82 1e-13
ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citr... 81 1e-13
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
ref|XP_002532388.1| pentatricopeptide repeat-containing protein,... 78 1e-12
ref|XP_007140312.1| hypothetical protein PHAVU_008G101600g [Phas... 78 1e-12
ref|XP_006838717.1| hypothetical protein AMTR_s00002p00251730 [A... 78 1e-12
ref|XP_004249774.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_006339168.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_004290301.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_004287488.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_003613018.1| Pentatricopeptide repeat-containing protein ... 72 6e-11
ref|XP_006346754.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_007158351.1| hypothetical protein PHAVU_002G145400g [Phas... 72 1e-10
>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
protein product [Vitis vinifera]
Length = 890
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/55 (70%), Positives = 47/55 (85%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+AWK+LIDGLLK+ V+ CSEL+DIMEEKGCQPNP TYS+LI L
Sbjct: 833 LLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>ref|XP_007047758.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590706571|ref|XP_007047759.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508700019|gb|EOX91915.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508700020|gb|EOX91916.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 946
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPD 172
LL C +N DE+AWK+LIDGLLKKG +RCSELL IME+ GCQ +P TYSMLIA L +
Sbjct: 889 LLRCGYNSDEVAWKVLIDGLLKKGLADRCSELLSIMEKMGCQLHPNTYSMLIAGLEE 945
>ref|XP_004306479.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Fragaria vesca subsp. vesca]
Length = 671
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C +N DE+AWK+L DGLLK+G VNRCSEL+ IME+ GC+ +PQTYSMLI DG D
Sbjct: 614 LLRCGYNFDEVAWKVLHDGLLKRGLVNRCSELITIMEQMGCKLHPQTYSMLI----DGID 669
Query: 182 G 184
G
Sbjct: 670 G 670
>ref|XP_007226363.1| hypothetical protein PRUPE_ppa022421mg [Prunus persica]
gi|462423299|gb|EMJ27562.1| hypothetical protein
PRUPE_ppa022421mg [Prunus persica]
Length = 845
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C +N+DE+AWK+L+DGLLK+G VN CSEL+ IME+ GCQ +PQTYSMLI +G D
Sbjct: 788 LLRCGYNYDEVAWKVLLDGLLKRGLVNICSELVSIMEKMGCQLHPQTYSMLI----EGID 843
Query: 182 G 184
G
Sbjct: 844 G 844
>gb|EYU30924.1| hypothetical protein MIMGU_mgv1a001068mg [Mimulus guttatus]
Length = 897
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C +N+DE+AWK+LIDGLLK+GFV CSEL+ +ME+ GC NPQT++MLI + D
Sbjct: 836 LLHCGYNYDEVAWKVLIDGLLKRGFVKICSELVGVMEKSGCTLNPQTHTMLIQGILDQEK 895
Query: 182 G 184
G
Sbjct: 896 G 896
>ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Citrus sinensis]
Length = 922
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C +N DE+AWKILIDGLLKKG ++CSELLDIME+KGCQ TY+MLI L D
Sbjct: 853 LLHCGYNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGLDKRMD 912
>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like isoform X1 [Glycine max]
gi|571478486|ref|XP_006587579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Glycine max]
gi|571478488|ref|XP_006587580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Glycine max]
Length = 892
Score = 81.6 bits (200), Expect = 1e-13
Identities = 34/55 (61%), Positives = 48/55 (87%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+AWK+LIDGL K G+V++CSELL++ME+ GC+ +P+TYSML+ EL
Sbjct: 835 LLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X2 [Citrus sinensis]
Length = 910
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N DE+AWKILIDGLLKKG ++CSELLDIME+KGCQ TY+MLI L
Sbjct: 853 LLHCGYNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGL 907
>ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citrus clementina]
gi|557544430|gb|ESR55408.1| hypothetical protein
CICLE_v10018770mg [Citrus clementina]
Length = 910
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N DE+AWKILIDGLLKKG ++CSELLDIME+KGCQ TY+MLI L
Sbjct: 853 LLHCGYNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGL 907
>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Cucumis sativus] gi|449522905|ref|XP_004168466.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +2
Query: 5 LGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSDG 184
L CE+N+DE+ WK+LIDGLLKKG ++CS+L IME +GCQ +P+TYSMLI +G DG
Sbjct: 855 LQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLI----EGFDG 910
>ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527912|gb|EEF30000.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 676
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C +N DE+AWKILIDGLLK G + CSELL +ME +GCQ +PQTY MLI +G D
Sbjct: 619 LLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI----EGLD 674
Query: 182 G 184
G
Sbjct: 675 G 675
>ref|XP_007140312.1| hypothetical protein PHAVU_008G101600g [Phaseolus vulgaris]
gi|561013445|gb|ESW12306.1| hypothetical protein
PHAVU_008G101600g [Phaseolus vulgaris]
Length = 896
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
LL C++N+DE+AWK+LIDGLLK G+ + CS L ME+KGCQ +PQTY+ML+ +G D
Sbjct: 839 LLCCQYNYDEVAWKVLIDGLLKNGYNDECSMFLKSMEKKGCQLHPQTYAMLV----EGLD 894
Query: 182 G 184
G
Sbjct: 895 G 895
>ref|XP_006838717.1| hypothetical protein AMTR_s00002p00251730 [Amborella trichopoda]
gi|548841223|gb|ERN01286.1| hypothetical protein
AMTR_s00002p00251730 [Amborella trichopoda]
Length = 904
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPD 172
+L C +N DE+ WKILIDGLLK G V+RCSELL IME+ G P+ QTY +LI +LP+
Sbjct: 848 MLQCGYNSDEVTWKILIDGLLKDGLVDRCSELLGIMEKGGFPPSSQTYDLLIKQLPE 904
>ref|XP_004249774.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Solanum lycopersicum]
Length = 913
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+AWK+LIDGLLK+G V+RCSELLDIME+ G + + QTY+ L+ L
Sbjct: 853 LLDCGYNNDEVAWKLLIDGLLKRGLVDRCSELLDIMEKNGSRLSSQTYTFLLEGL 907
>ref|XP_006339168.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Solanum tuberosum]
gi|565344128|ref|XP_006339169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Solanum tuberosum]
gi|565344130|ref|XP_006339170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Solanum tuberosum]
gi|565344132|ref|XP_006339171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X4 [Solanum tuberosum]
Length = 915
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+AWK+LIDGLLK+G +RCSELLDIME+ G + + QTY+ L+ L
Sbjct: 855 LLDCGYNNDEVAWKLLIDGLLKRGLADRCSELLDIMEKNGSRLSSQTYTFLLEGL 909
>ref|XP_004290301.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Fragaria vesca subsp. vesca]
Length = 671
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
+L C +N+DEIAWK+L+DG +K+G +N CSELL IME+ CQ +P++YSMLI L
Sbjct: 614 MLCCGYNYDEIAWKVLLDGCVKRGHLNSCSELLTIMEKMDCQLHPESYSMLIQGL 668
>ref|XP_004287488.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/61 (50%), Positives = 48/61 (78%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAELPDGSD 181
+L C +N+DE+AWK+L++GLLK+G +NRCSE++ ++E G + +P+TYSMLI +G D
Sbjct: 616 ILCCAYNYDEVAWKVLLEGLLKRGHINRCSEMVTVIEHMGYKLHPETYSMLI----EGFD 671
Query: 182 G 184
G
Sbjct: 672 G 672
>ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 894
Score = 72.4 bits (176), Expect = 6e-11
Identities = 29/55 (52%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+ WK+L+DGL++KG+V+ CS+L DIME+ GC+ + T++ML EL
Sbjct: 837 LLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891
>ref|XP_006346754.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Solanum tuberosum]
Length = 764
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LLGC +N+DE+AWK+LIDGLL++G V+RC ELLDIME+ + + TYS+L+ L
Sbjct: 704 LLGCGYNNDEVAWKLLIDGLLERGLVDRCLELLDIMEKNRFRLSAHTYSLLLEGL 758
>ref|XP_007158351.1| hypothetical protein PHAVU_002G145400g [Phaseolus vulgaris]
gi|561031766|gb|ESW30345.1| hypothetical protein
PHAVU_002G145400g [Phaseolus vulgaris]
Length = 904
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/55 (54%), Positives = 45/55 (81%)
Frame = +2
Query: 2 LLGCEFNHDEIAWKILIDGLLKKGFVNRCSELLDIMEEKGCQPNPQTYSMLIAEL 166
LL C +N+DE+AWKILIDGL + G+V++C+ELL +M++ GC+ + +T SML+ EL
Sbjct: 842 LLRCGYNYDEVAWKILIDGLARSGYVDQCTELLSLMKKNGCRLHSETCSMLMQEL 896