BLASTX nr result
ID: Sinomenium21_contig00038091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00038091
(521 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 74 4e-13
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun... 72 5e-13
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun... 72 5e-13
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 70 9e-11
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus... 71 1e-10
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 64 2e-10
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 69 7e-10
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul... 59 2e-09
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [... 59 3e-09
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A... 63 3e-09
ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phas... 59 3e-09
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit... 67 3e-09
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit... 67 3e-09
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 67 3e-09
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 65 1e-08
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 65 1e-08
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 65 1e-08
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 59 2e-08
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 59 2e-08
ref|XP_006573910.1| PREDICTED: RNA pseudouridine synthase 4, mit... 59 2e-08
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 73.6 bits (179), Expect(2) = 4e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRDSSGIL+MGRTQTSAT+LHSIFREKTFG SNN
Sbjct: 233 VHRLDRDSSGILIMGRTQTSATILHSIFREKTFGASNN 270
Score = 26.6 bits (57), Expect(2) = 4e-13
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 40 DNTKRILQRKYWA 2
D KRILQR+YWA
Sbjct: 273 DTKKRILQRRYWA 285
>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395210|gb|EMJ01009.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 71.6 bits (174), Expect(2) = 5e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRDSSGILVMGRTQTSAT+LHSIFREKTFG SN+
Sbjct: 240 VHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASND 277
Score = 28.1 bits (61), Expect(2) = 5e-13
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 46 ENDNTKRILQRKYWA 2
E D+ KRILQR+YWA
Sbjct: 278 EIDDAKRILQRRYWA 292
>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395209|gb|EMJ01008.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 71.6 bits (174), Expect(2) = 5e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRDSSGILVMGRTQTSAT+LHSIFREKTFG SN+
Sbjct: 240 VHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASND 277
Score = 28.1 bits (61), Expect(2) = 5e-13
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 46 ENDNTKRILQRKYWA 2
E D+ KRILQR+YWA
Sbjct: 278 EIDDAKRILQRRYWA 292
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 69.7 bits (169), Expect(2) = 9e-11
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRD SGILVMGRTQTSAT+LHSIFREKTFG SN+
Sbjct: 227 VHRLDRDCSGILVMGRTQTSATVLHSIFREKTFGASND 264
Score = 22.3 bits (46), Expect(2) = 9e-11
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 3/17 (17%)
Frame = -2
Query: 43 NDNT---KRILQRKYWA 2
ND T K +LQR+YWA
Sbjct: 263 NDETVKGKIVLQRRYWA 279
>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LDRDSSGILVMGRTQ S T+LHS+FREKTFG SNNV
Sbjct: 216 VHRLDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNV 254
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRD SGILVMGRTQTSAT+LH+IFREKT SN+
Sbjct: 229 VHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASND 266
Score = 26.6 bits (57), Expect(2) = 2e-10
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 37 NTKRILQRKYWA 2
N +RILQRKYWA
Sbjct: 270 NKRRILQRKYWA 281
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LDRD SGILVMGRTQTSAT+LHS+FREKTFG S++V
Sbjct: 223 VHRLDRDCSGILVMGRTQTSATVLHSVFREKTFGASDDV 261
>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
gi|355501934|gb|AES83137.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 430
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSN 93
VH+LDRD SGILVMGRT+TS LLHSIFREKT SN
Sbjct: 186 VHRLDRDCSGILVMGRTKTSTALLHSIFREKTSRASN 222
Score = 28.1 bits (61), Expect(2) = 2e-09
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 49 KENDNTKRILQRKYWA 2
+END K ILQR+YWA
Sbjct: 223 EENDTEKIILQRRYWA 238
>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
synthase, putative [Theobroma cacao]
Length = 477
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRDSSGILVMGRTQ SAT+LHS+FRE+T S +
Sbjct: 234 VHRLDRDSSGILVMGRTQMSATILHSVFREETNDASKD 271
Score = 27.7 bits (60), Expect(2) = 3e-09
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 40 DNTKRILQRKYWA 2
DN KRILQ++YWA
Sbjct: 274 DNEKRILQKRYWA 286
>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
gi|548850328|gb|ERN08832.1| hypothetical protein
AMTR_s00015p00025410 [Amborella trichopoda]
Length = 457
Score = 63.2 bits (152), Expect(2) = 3e-09
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LD+DSSGILVMGRTQ S TLLHSIFR+KT G S NV
Sbjct: 216 VHRLDQDSSGILVMGRTQESTTLLHSIFRDKTCGASFNV 254
Score = 23.9 bits (50), Expect(2) = 3e-09
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 37 NTKRILQRKYWA 2
N+K IL+RKYWA
Sbjct: 258 NSKIILKRKYWA 269
>ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
gi|561030644|gb|ESW29223.1| hypothetical protein
PHAVU_002G053600g [Phaseolus vulgaris]
Length = 432
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKT 108
VH+LDRD SGILVMGRTQTS T+LHSIFREKT
Sbjct: 191 VHRLDRDCSGILVMGRTQTSTTVLHSIFREKT 222
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 79 VFQLHTFILFKENDNTKRILQRKYWA 2
+F+ T + + KRILQR+YWA
Sbjct: 217 IFREKTSRALDDTEEEKRILQRRYWA 242
>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X3 [Citrus sinensis]
Length = 275
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVS 96
VH+LDRDSSGILVMGRTQTSAT+LHSIFREKTF S
Sbjct: 32 VHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSAS 67
>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
PREDICTED: RNA pseudouridine synthase 4,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 362
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVS 96
VH+LDRDSSGILVMGRTQTSAT+LHSIFREKTF S
Sbjct: 119 VHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSAS 154
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVS 96
VH+LDRDSSGILVMGRTQTSAT+LHSIFREKTF S
Sbjct: 251 VHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSAS 286
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNN 90
VH+LDRDSSGILVMGRTQTS +LHS+FREKTF SN+
Sbjct: 294 VHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNH 331
>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNVQH 81
VH+LDRDSSGIL+MGRT TS +LLHS+FREKTF S + H
Sbjct: 234 VHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANH 274
>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 466
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNVQH 81
VH+LDRDSSGIL+MGRT TS +LLHS+FREKTF S + H
Sbjct: 229 VHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANH 269
>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X2 [Glycine max]
Length = 429
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LDRD SGILVMGRT TS T+LHSIFREKT S+++
Sbjct: 188 VHRLDRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDI 226
Score = 24.6 bits (52), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2
Query: 31 KRILQRKYWA 2
KRILQR+YWA
Sbjct: 230 KRILQRRYWA 239
>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Glycine max]
Length = 427
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LDRD SGILVMGRT TS T+LHSIFREKT S+++
Sbjct: 186 VHRLDRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDI 224
Score = 24.6 bits (52), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2
Query: 31 KRILQRKYWA 2
KRILQR+YWA
Sbjct: 228 KRILQRRYWA 237
>ref|XP_006573910.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X3 [Glycine max]
Length = 324
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -1
Query: 203 VHQLDRDSSGILVMGRTQTSATLLHSIFREKTFGVSNNV 87
VH+LDRD SGILVMGRT TS T+LHSIFREKT S+++
Sbjct: 188 VHRLDRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDI 226
Score = 24.6 bits (52), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2
Query: 31 KRILQRKYWA 2
KRILQR+YWA
Sbjct: 230 KRILQRRYWA 239