BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00037774
         (281 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK19514.1| ORF VI [Strawberry vein banding virus]                  70   4e-10
ref|NP_043934.1| hypothetical protein [Strawberry vein banding v...    70   4e-10
emb|CCG14717.1| ORF VI protein [Strawberry vein banding virus]         70   4e-10
emb|CAX46384.1| P6 [Strawberry vein banding virus]                     70   4e-10

>gb|AAK19514.1| ORF VI [Strawberry vein banding virus]
          Length = 261

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = -2

Query: 223 IRPRRLKAVFDKYRNIFADSKVKVNYADSKRIILSKFREKISKEDGQNLIINEEKFLSGQ 44
           +RP+R+KAV+++   IFADSK K+NYAD K I++S + E I +++   L   E +F SGQ
Sbjct: 148 LRPKRIKAVYNQCTKIFADSKKKLNYADDKIILISNYSELIKEKELITLSEYEARFTSGQ 207

Query: 43  LDVTPATLKGWC 8
           L +T  T + WC
Sbjct: 208 LAITEKTARQWC 219


>ref|NP_043934.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360614|emb|CAA65971.1| ORF VI [Strawberry vein
           banding virus]
          Length = 514

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = -2

Query: 223 IRPRRLKAVFDKYRNIFADSKVKVNYADSKRIILSKFREKISKEDGQNLIINEEKFLSGQ 44
           +RP+R+KAV+++   IFADSK K+NYAD K I++S + E I +++   L   E +F SGQ
Sbjct: 401 LRPKRIKAVYNQCTKIFADSKKKLNYADDKIILISNYSELIKEKELITLSEYEARFTSGQ 460

Query: 43  LDVTPATLKGWC 8
           L +T  T + WC
Sbjct: 461 LAITEKTARQWC 472


>emb|CCG14717.1| ORF VI protein [Strawberry vein banding virus]
          Length = 518

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = -2

Query: 223 IRPRRLKAVFDKYRNIFADSKVKVNYADSKRIILSKFREKISKEDGQNLIINEEKFLSGQ 44
           +RP+RLKAV+++   IFADSK K+NYAD K I++S + E I + +   L   E +F SGQ
Sbjct: 399 LRPKRLKAVYNQCIKIFADSKKKINYADDKIILISNYSELIKEAELITLSKYEARFTSGQ 458

Query: 43  LDVTPATLKGWC 8
           L +T  T + WC
Sbjct: 459 LAITEKTARQWC 470


>emb|CAX46384.1| P6 [Strawberry vein banding virus]
          Length = 518

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = -2

Query: 223 IRPRRLKAVFDKYRNIFADSKVKVNYADSKRIILSKFREKISKEDGQNLIINEEKFLSGQ 44
           +RP+RLKAV+++   IFADSK K+NYAD K I++S + E I + +   L   E +F SGQ
Sbjct: 399 LRPKRLKAVYNQCIKIFADSKKKINYADDKIILISNYSELIKEAELITLSKYEARFTSGQ 458

Query: 43  LDVTPATLKGWC 8
           L +T  T + WC
Sbjct: 459 LAITEKTARQWC 470