BLASTX nr result
ID: Sinomenium21_contig00037550
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00037550
(959 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera] 447 e-123
ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi... 446 e-123
emb|CBI39683.3| unnamed protein product [Vitis vinifera] 446 e-123
ref|XP_002323212.2| pentatricopeptide repeat-containing family p... 426 e-117
ref|XP_006423950.1| hypothetical protein CICLE_v10030069mg [Citr... 423 e-116
ref|XP_004304919.1| PREDICTED: pentatricopeptide repeat-containi... 423 e-116
ref|XP_007207191.1| hypothetical protein PRUPE_ppa017094mg [Prun... 420 e-115
gb|EXB57565.1| hypothetical protein L484_022672 [Morus notabilis] 409 e-111
ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containi... 404 e-110
ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containi... 404 e-110
ref|XP_006402977.1| hypothetical protein EUTSA_v10005859mg [Eutr... 380 e-103
ref|NP_191214.1| pentatricopeptide repeat-containing protein [Ar... 379 e-103
ref|XP_006290466.1| hypothetical protein CARUB_v10019566mg [Caps... 379 e-102
ref|XP_002878095.1| pentatricopeptide repeat-containing protein ... 357 5e-96
ref|XP_007037366.1| Pentatricopeptide repeat superfamily protein... 310 7e-82
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 308 2e-81
ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containi... 308 2e-81
ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containi... 308 3e-81
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 306 6e-81
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi... 306 8e-81
>emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 447 bits (1150), Expect = e-123
Identities = 216/317 (68%), Positives = 260/317 (82%), Gaps = 5/317 (1%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+GRGDEAIT F ML GV+PNS+TFLGLLCGCSHQGL++EG +
Sbjct: 666 RDVFTWNSMIVGYGVHGRGDEAITFFGSMLM-AGVRPNSITFLGLLCGCSHQGLVKEGVQ 724
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFHMM SE NL+PGIKHYGCMVDL+GRAG+L++AL+VI +SPS DPVLWRTLLG+CKIH
Sbjct: 725 YFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH 784
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RNVE+GE A+RNLV L +L AGDCVLL+GIYAE +D G A+MRKLI+ +GIKT+PGWSW
Sbjct: 785 RNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSW 844
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGE----- 705
IE+ + VHRFVV D+SHP S+EIY KL+E+ A+LVGY EE + AAP
Sbjct: 845 IEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLV--AAPESNTQEYC 902
Query: 706 WPGISGSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDR 885
W S S+HSE+LAIA+GL RTP+GTSL IVKNLR+CRDC +F+K +SK F+REI+VRDR
Sbjct: 903 WE-TSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSKAFDREIIVRDR 961
Query: 886 VRFHHFKDGACSCKDYW 936
VRFHHF+ G CSCK++W
Sbjct: 962 VRFHHFRGGHCSCKEFW 978
>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 446 bits (1147), Expect = e-123
Identities = 216/317 (68%), Positives = 259/317 (81%), Gaps = 5/317 (1%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+GRGDEAIT F ML GV+PNS+TFLGLLCGCSHQGL++EG +
Sbjct: 291 RDVFTWNSMIVGYGVHGRGDEAITFFGSMLM-AGVRPNSITFLGLLCGCSHQGLVKEGVQ 349
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFHMM SE NL+PGIKHYGCMVDL+GRAG+L++AL+VI +SPS DPVLWRTLLG+CKIH
Sbjct: 350 YFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH 409
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RNVE+GE A+RNLV L +L AGDCVLL+GIYAE +D G A+MRKLI+ +GIKT+PGWSW
Sbjct: 410 RNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSW 469
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGE----- 705
IE+ + VHRFVV D+SHP S+EIY KL+E+ A+LVGY EE + AAP
Sbjct: 470 IEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLV--AAPESNTQEYC 527
Query: 706 WPGISGSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDR 885
W S S+HSE+LAIA+GL RTP+GTSL IVKNLR+CRDC +F+K +S F+REI+VRDR
Sbjct: 528 WE-TSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSMAFDREIIVRDR 586
Query: 886 VRFHHFKDGACSCKDYW 936
VRFHHFK G CSCK++W
Sbjct: 587 VRFHHFKGGHCSCKEFW 603
>emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 446 bits (1147), Expect = e-123
Identities = 216/317 (68%), Positives = 259/317 (81%), Gaps = 5/317 (1%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+GRGDEAIT F ML GV+PNS+TFLGLLCGCSHQGL++EG +
Sbjct: 273 RDVFTWNSMIVGYGVHGRGDEAITFFGSMLM-AGVRPNSITFLGLLCGCSHQGLVKEGVQ 331
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFHMM SE NL+PGIKHYGCMVDL+GRAG+L++AL+VI +SPS DPVLWRTLLG+CKIH
Sbjct: 332 YFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH 391
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RNVE+GE A+RNLV L +L AGDCVLL+GIYAE +D G A+MRKLI+ +GIKT+PGWSW
Sbjct: 392 RNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSW 451
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGE----- 705
IE+ + VHRFVV D+SHP S+EIY KL+E+ A+LVGY EE + AAP
Sbjct: 452 IEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLV--AAPESNTQEYC 509
Query: 706 WPGISGSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDR 885
W S S+HSE+LAIA+GL RTP+GTSL IVKNLR+CRDC +F+K +S F+REI+VRDR
Sbjct: 510 WE-TSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSMAFDREIIVRDR 568
Query: 886 VRFHHFKDGACSCKDYW 936
VRFHHFK G CSCK++W
Sbjct: 569 VRFHHFKGGHCSCKEFW 585
>ref|XP_002323212.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320693|gb|EEF04973.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 584
Score = 426 bits (1094), Expect = e-117
Identities = 200/312 (64%), Positives = 249/312 (79%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+G GDEAI F QML E GV+PNS+ FLGLLCGCSHQGL+EEG +
Sbjct: 274 RDVFTWNSMIVGFGVHGFGDEAIYFFNQML-EAGVRPNSIAFLGLLCGCSHQGLVEEGVE 332
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+FH M S+ N++PGIKHYGCMVD+YGRAG+LEKAL++I +SP DDPVLWR LL + KIH
Sbjct: 333 FFHQMSSKFNVKPGIKHYGCMVDMYGRAGKLEKALEIIGDSPWQDDPVLWRILLSSSKIH 392
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NV +GE A+RNL L ++AGDCVLLA IYA D+ G A+MRKLIK +GIKT+PGWSW
Sbjct: 393 KNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGANDEQGVARMRKLIKKQGIKTTPGWSW 452
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+ + VHRFVV D+SHP S IY KL+E+T +A + GYVE++ + + + E S
Sbjct: 453 IEVSDQVHRFVVDDKSHPDSGMIYQKLEEVTHKATMAGYVEDKSQFIFHGSCSEECLESS 512
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
++HSE+LAIAFGL +TP+GTSLRIVKNLR+CRDC F+K +S+ F R+I+VRDR+RFHH
Sbjct: 513 STYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCRDCHEFTKFVSRAFNRDIIVRDRLRFHH 572
Query: 901 FKDGACSCKDYW 936
FK G CSC+DYW
Sbjct: 573 FKGGLCSCRDYW 584
Score = 60.8 bits (146), Expect = 8e-07
Identities = 37/120 (30%), Positives = 57/120 (47%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RD+ WN+MI G EA+ ++ M E V + T +GLL CSH G + G K
Sbjct: 174 RDLVAWNAMISCYSQAGYHQEALRVYDYMRNEN-VGVDGFTLVGLLSSCSHVGALNMGVK 232
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
H + SE L + ++D+Y + G L+ AL+V P D W +++ +H
Sbjct: 233 -LHRIASEKGLLRNVFVGNALIDMYAKCGSLDGALEVFNGMPR--DVFTWNSMIVGFGVH 289
>ref|XP_006423950.1| hypothetical protein CICLE_v10030069mg [Citrus clementina]
gi|568853357|ref|XP_006480328.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g56550-like [Citrus sinensis]
gi|557525884|gb|ESR37190.1| hypothetical protein
CICLE_v10030069mg [Citrus clementina]
Length = 579
Score = 423 bits (1087), Expect = e-116
Identities = 203/312 (65%), Positives = 248/312 (79%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV +WNSMIVG GV+GRGDEAI+ F+QML G P+S+TFLGLLCGCSHQGL+EEG +
Sbjct: 270 RDVLSWNSMIVGYGVHGRGDEAISFFKQMLM-AGFHPDSITFLGLLCGCSHQGLVEEGVE 328
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFHMM S NL+PGIKHYGC+VDLYGRAG+LEKAL+VI N+ S DPVLWRTLLG+CKIH
Sbjct: 329 YFHMMVSRYNLKPGIKHYGCLVDLYGRAGKLEKALEVI-NTSSPSDPVLWRTLLGSCKIH 387
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RNVE+GE A++NLV LE SAGD VLLA IYA +D+ G A+ RKLIK GIKT+PGWSW
Sbjct: 388 RNVEIGEIAMKNLVQLEAASAGDYVLLATIYACTKDEEGVARTRKLIKSNGIKTTPGWSW 447
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI VH+FVV D+SHP + IY KL+EI A +GY ++E S + ++ S
Sbjct: 448 IEIGNQVHKFVVDDKSHPDADMIYRKLEEIMHRAKFIGYTKDESLVAVSGSSSEDFLEKS 507
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
++HSE+LAIAFGL TPDGTSLRIVKNLR+CRDC SF+K +S+ + R+++VRDRVR+HH
Sbjct: 508 SAYHSEKLAIAFGLATTPDGTSLRIVKNLRVCRDCHSFTKFVSRAYSRDLIVRDRVRYHH 567
Query: 901 FKDGACSCKDYW 936
F++G CSC DYW
Sbjct: 568 FREGLCSCGDYW 579
>ref|XP_004304919.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550-like
[Fragaria vesca subsp. vesca]
Length = 589
Score = 423 bits (1087), Expect = e-116
Identities = 201/314 (64%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RD TWNSMIVG GV+GRG+EAI F +M+ GVQPNS+TFLGLLCGCSHQGL+E+G
Sbjct: 277 RDAFTWNSMIVGYGVHGRGNEAIYFFEKMMM-AGVQPNSITFLGLLCGCSHQGLVEKGVD 335
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFHMM S N++PGIKHYGC+VDL+GRAG+LEKAL VI S + DDPVLWRTLL +CKIH
Sbjct: 336 YFHMMSSRFNIKPGIKHYGCLVDLFGRAGKLEKALHVIRTSRAQDDPVLWRTLLSSCKIH 395
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
NV++GE A++NL+ L + +AGD VLLA IY + +D G ++MRKLIK++G++T+PGWSW
Sbjct: 396 MNVDIGEVALKNLIRLGSSNAGDYVLLATIYFKAKDADGVSRMRKLIKNQGVRTTPGWSW 455
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGS--AAPRGEWPG 714
IE+ + +H+FVV D+SHP ++EIY KL+ + ++AAL GYV+EE S + E G
Sbjct: 456 IEVGDQIHKFVVDDKSHPDTEEIYTKLEVVVQQAALNGYVQEESLIRASDFTSIDTECSG 515
Query: 715 ISGSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRF 894
SGS HSE+LAIAFGL RTP+GT LRIVKNLR+CRDC SF+K +S F REI+VRDRVRF
Sbjct: 516 TSGSCHSEKLAIAFGLARTPEGTCLRIVKNLRVCRDCHSFTKFVSLAFNREIIVRDRVRF 575
Query: 895 HHFKDGACSCKDYW 936
HHFK G CSCKDYW
Sbjct: 576 HHFKGGLCSCKDYW 589
>ref|XP_007207191.1| hypothetical protein PRUPE_ppa017094mg [Prunus persica]
gi|462402833|gb|EMJ08390.1| hypothetical protein
PRUPE_ppa017094mg [Prunus persica]
Length = 590
Score = 420 bits (1080), Expect = e-115
Identities = 205/319 (64%), Positives = 250/319 (78%), Gaps = 7/319 (2%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+GRGDE+I+ F QML GV+PNS+TFLGLLCGCSHQGL+E+G +
Sbjct: 278 RDVFTWNSMIVGYGVHGRGDESISFFGQMLM-AGVRPNSITFLGLLCGCSHQGLVEKGVE 336
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YF++M + N++PGIKHYGC+VDL+GRAG L+KALQVI S + DDPVLWRTLLG+CKIH
Sbjct: 337 YFNVMSFKFNIKPGIKHYGCLVDLFGRAGMLKKALQVIRTSRAQDDPVLWRTLLGSCKIH 396
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NVE+GE A+RNL+ L + +AGD VLLA IY +D G A+MRKLIK +G+KT+PGWSW
Sbjct: 397 KNVEIGEIAMRNLIQLGSSNAGDYVLLATIYFREKDADGVARMRKLIKTQGVKTTPGWSW 456
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPG-- 714
IEI + VH+FVV D+SHP + EIY KL+ + +AAL GYV+E GS E+
Sbjct: 457 IEIGDQVHKFVVDDKSHPDANEIYQKLRVVVHQAALHGYVQE-----GSLITVSEFNSTD 511
Query: 715 -----ISGSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVR 879
SGS H E+LAIAFGL RTP+GT LRIVKNLR+CRDC SF+K +S+ F REI+VR
Sbjct: 512 TDCLETSGSCHGEKLAIAFGLARTPEGTCLRIVKNLRVCRDCHSFTKFVSQAFNREIVVR 571
Query: 880 DRVRFHHFKDGACSCKDYW 936
DRVRFHHFK G CSCKDYW
Sbjct: 572 DRVRFHHFKGGLCSCKDYW 590
Score = 57.4 bits (137), Expect = 8e-06
Identities = 35/120 (29%), Positives = 57/120 (47%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RD+ +WNSMI G EA++ + M +E V + T +GLL C+H G + G
Sbjct: 177 RDLVSWNSMISCYSQRGFHHEALSTYNLMRKEN-VGLDGFTLVGLLSSCAHLGALNTGVT 235
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
H + E L + ++D+Y + G L+ AL V E + D W +++ +H
Sbjct: 236 -VHRIAREKGLLGNVYVGNALIDMYAKCGNLDSALSVFERMQN-RDVFTWNSMIVGYGVH 293
>gb|EXB57565.1| hypothetical protein L484_022672 [Morus notabilis]
Length = 584
Score = 409 bits (1050), Expect = e-111
Identities = 193/312 (61%), Positives = 240/312 (76%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSM+VG G +G G EAI F +ML G PNS+TFLGLLCGC+HQGL+EEG +
Sbjct: 285 RDVLTWNSMVVGYGGHGLGKEAIEFFEKMLM-AGFHPNSITFLGLLCGCNHQGLVEEGVE 343
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YFH M S+ N++PGIKHYGC+VDL+GRAG+LEKAL+VI+N PS DPVLWRTLL +CKIH
Sbjct: 344 YFHRMTSKYNIKPGIKHYGCLVDLFGRAGKLEKALEVIKNCPSQHDPVLWRTLLSSCKIH 403
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NVE+GE A+R+LV + +AGDC+LLA IY + G A+MRK+IK GI+T+PGWSW
Sbjct: 404 KNVEMGEIAMRSLVQVGASNAGDCILLASIYQGVNNVDGVARMRKMIKSWGIRTTPGWSW 463
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+ + VH+FVV D+SHP++ EIY KL+E+ + +GYVEE G W +
Sbjct: 464 IEVADQVHKFVVDDKSHPHTNEIYNKLREVIHVLSQLGYVEE-----------GFWGTST 512
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
S+HSE+LAIAFG+ RTP+GT LRIVKNLR+C DC SF+K +SK F REI+VRDRVRFHH
Sbjct: 513 SSYHSEKLAIAFGIARTPEGTCLRIVKNLRVCGDCHSFTKFVSKAFNREIVVRDRVRFHH 572
Query: 901 FKDGACSCKDYW 936
FK G CSC DYW
Sbjct: 573 FKGGLCSCNDYW 584
>ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550-like
[Cucumis sativus]
Length = 579
Score = 404 bits (1039), Expect = e-110
Identities = 194/312 (62%), Positives = 239/312 (76%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
+D+ TWNSMIVG GV+GRG EAI F+QML E +QPN VTFLGLLCGCSHQGL++EG K
Sbjct: 270 KDIFTWNSMIVGYGVHGRGSEAIYCFQQML-EARIQPNPVTFLGLLCGCSHQGLVQEGVK 328
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YF++M S+ L+P +KHYGC+VDLYGRAG+L+KAL+++ NS S +D VLWR LLG+CKIH
Sbjct: 329 YFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNS-SHNDSVLWRILLGSCKIH 387
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NV +GE A+ L L SAGDC+LLA IYA +D+ G A+MRK+IK +G KT+PGWSW
Sbjct: 388 KNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWSW 447
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI E VH+FVV D+SH YS E+Y KL+E+ +A+ GYV +E S E S
Sbjct: 448 IEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDESISSLDMLSTMETLKTS 507
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
++HSE+LAIAFGL RT DGT +RIVKNLR+CRDC SF K +S F REI+VRDRVRFHH
Sbjct: 508 CTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVSVAFNREIIVRDRVRFHH 567
Query: 901 FKDGACSCKDYW 936
FK G CSC DYW
Sbjct: 568 FKGGECSCNDYW 579
>ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550-like
[Cucumis sativus]
Length = 579
Score = 404 bits (1039), Expect = e-110
Identities = 194/312 (62%), Positives = 239/312 (76%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
+D+ TWNSMIVG GV+GRG EAI F+QML E +QPN VTFLGLLCGCSHQGL++EG K
Sbjct: 270 KDIFTWNSMIVGYGVHGRGSEAIYCFQQML-EARIQPNPVTFLGLLCGCSHQGLVQEGVK 328
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YF++M S+ L+P +KHYGC+VDLYGRAG+L+KAL+++ NS S +D VLWR LLG+CKIH
Sbjct: 329 YFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNS-SHNDSVLWRILLGSCKIH 387
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NV +GE A+ L L SAGDC+LLA IYA +D+ G A+MRK+IK +G KT+PGWSW
Sbjct: 388 KNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWSW 447
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI E VH+FVV D+SH YS E+Y KL+E+ +A+ GYV +E S E S
Sbjct: 448 IEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDESISSLDMLSTMETLKTS 507
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
++HSE+LAIAFGL RT DGT +RIVKNLR+CRDC SF K +S F REI+VRDRVRFHH
Sbjct: 508 CTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVSVAFNREIIVRDRVRFHH 567
Query: 901 FKDGACSCKDYW 936
FK G CSC DYW
Sbjct: 568 FKGGECSCNDYW 579
>ref|XP_006402977.1| hypothetical protein EUTSA_v10005859mg [Eutrema salsugineum]
gi|557104076|gb|ESQ44430.1| hypothetical protein
EUTSA_v10005859mg [Eutrema salsugineum]
Length = 579
Score = 380 bits (975), Expect = e-103
Identities = 180/312 (57%), Positives = 232/312 (74%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMIVG GV+G G EAI+ FR+M+ G V+PN++TFLGLL GCSHQGL++EG +
Sbjct: 272 RDVLTWNSMIVGYGVHGHGVEAISFFRKMVTSG-VKPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+F MM S+ +L P +KHYGCMVDLYGRAG+L+KAL++I S +DPVLWRTLLG+CKIH
Sbjct: 331 HFQMMGSQFHLSPSVKHYGCMVDLYGRAGQLDKALEMIHTSACHEDPVLWRTLLGSCKIH 390
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
N+E+GE A++ LV LE +AGD VL+ +Y+ D G+A MRKLI+ ++T PGWSW
Sbjct: 391 MNLELGEVAMKKLVQLEAFNAGDYVLMTSLYSAANDAQGFASMRKLIRSHDLRTIPGWSW 450
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI + VH+FVV D+ H S IY++L+E+ R A L GY E+ P ++
Sbjct: 451 IEIGDQVHKFVVDDKMHLDSALIYSQLQEVVRRAILAGYNPEDS---NITCPAFSDRCLN 507
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
+ HSE+LAIA+GL+ TP GT+LRI KNLR+CRDC SF+K +SK F R+I+VRDRVRFHH
Sbjct: 508 SAFHSEKLAIAYGLMTTPSGTTLRITKNLRVCRDCHSFTKCVSKAFGRDIIVRDRVRFHH 567
Query: 901 FKDGACSCKDYW 936
F G CSC DYW
Sbjct: 568 FAGGLCSCNDYW 579
>ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g56550 gi|7594533|emb|CAB88058.1| putative protein
[Arabidopsis thaliana] gi|91806586|gb|ABE66020.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332646013|gb|AEE79534.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 379 bits (974), Expect = e-103
Identities = 180/312 (57%), Positives = 233/312 (74%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMI+G GV+G G EAI+ FR+M+ G V+PN++TFLGLL GCSHQGL++EG +
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG-VRPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+F +M S+ +L P +KHYGCMVDLYGRAG+LE +L++I S +DPVLWRTLLG+CKIH
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RN+E+GE A++ LV LE +AGD VL+ IY+ D +A MRKLI+ ++T PGWSW
Sbjct: 391 RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSW 450
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI + VH+FVV D+ HP S IY++L E+ A L GY + E+ + + G +
Sbjct: 451 IEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGY-KPEDSNRTAPTLSDRCLGSA 509
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
+ HSE+LAIA+GL+RT GT+LRI KNLR+CRDC SF+K +SK F REI+VRDRVRFHH
Sbjct: 510 DTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHH 569
Query: 901 FKDGACSCKDYW 936
F DG CSC DYW
Sbjct: 570 FADGICSCNDYW 581
>ref|XP_006290466.1| hypothetical protein CARUB_v10019566mg [Capsella rubella]
gi|482559173|gb|EOA23364.1| hypothetical protein
CARUB_v10019566mg [Capsella rubella]
Length = 581
Score = 379 bits (972), Expect = e-102
Identities = 179/312 (57%), Positives = 231/312 (74%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMI+G GV+G G EAI+ FR+ML G V+PN++TFLGLL GCSHQGL+ EG +
Sbjct: 272 RDVLTWNSMIIGYGVHGHGLEAISFFRRMLASG-VRPNAITFLGLLLGCSHQGLVNEGVE 330
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+F +M S+ ++ P IKHYGCMVDLYGRAG+L KAL++I S +DPVLWRTLLG+CKIH
Sbjct: 331 HFEIMTSQFHVIPSIKHYGCMVDLYGRAGQLAKALEMIHTSSCHEDPVLWRTLLGSCKIH 390
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
NVE+GE A++NLV L+ +AGD VL+ IY+ D G+A MRKLI+ ++T PGWSW
Sbjct: 391 SNVELGEVAMKNLVQLKAFNAGDYVLMTSIYSAGNDTQGFASMRKLIRSHDLRTIPGWSW 450
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI + VH+FVV ++ HP S IY++L+E+ A L GY E+ G G +
Sbjct: 451 IEIGDQVHKFVVDEKMHPESALIYSELREVIHRAILAGYKPEDSNRTAPTLSDG-CLGSA 509
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
+ HSE+LAIA+GL+RTP GT+LRI KNLR+CRDC SF++ +SK F R+I+VRDRVRFHH
Sbjct: 510 DTFHSEKLAIAYGLMRTPAGTTLRITKNLRVCRDCHSFTRFVSKAFNRKIIVRDRVRFHH 569
Query: 901 FKDGACSCKDYW 936
F CSC +YW
Sbjct: 570 FASAHCSCNEYW 581
>ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323933|gb|EFH54354.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 651
Score = 357 bits (915), Expect = 5e-96
Identities = 172/301 (57%), Positives = 225/301 (74%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV TWNSMI+G GV+G G EAI+ FR+M+ G V+PN+VTFLGLL GCSHQGL++EG +
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG-VRPNAVTFLGLLLGCSHQGLVKEGVE 330
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+F +M S+ +L P +KHYGCMVDL+GRAG+LEKAL++I S +DPVLWRTLLG+CKIH
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKALEMIHTSSCHEDPVLWRTLLGSCKIH 390
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
RN+E+GE A++ LV LE +AGD VL+ IY+ D G+A MRKLI+ ++T PGWSW
Sbjct: 391 RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQGFASMRKLIRSHDLRTIPGWSW 450
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IEI + VH+FV+ D+ HP S IY++L E+ A L GY + E+ + + +
Sbjct: 451 IEIGDQVHKFVIDDKMHPESALIYSELGEVINRAILAGY-KPEDSNRTAHTLSDRCLESA 509
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
+ HSE+LAIA+GL+RT GT+LRI KNLR+CRDC SF+K +SK F REI+VRDRVRFH
Sbjct: 510 DTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHQ 569
Query: 901 F 903
F
Sbjct: 570 F 570
>ref|XP_007037366.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508774611|gb|EOY21867.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 640
Score = 310 bits (793), Expect = 7e-82
Identities = 150/312 (48%), Positives = 208/312 (66%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
++V +W++MI GL +NG G +AI F +M R G + P+ TF G+L CSH GL++EG +
Sbjct: 332 KNVISWSAMISGLAMNGYGRDAILAFEEMQRMG-IVPDEQTFTGVLSACSHCGLVDEGME 390
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+ H M E ++P I HYGCMVDL GRAG L++A QVI + D +WRTLLGAC+IH
Sbjct: 391 FLHQMSKEFGIEPNIHHYGCMVDLLGRAGLLDQAYQVIISMGVKPDATIWRTLLGACRIH 450
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+V +GE + +L+ L+ AGD VLL IY+ + ++RK +K+KGI+T+PG S
Sbjct: 451 GHVTLGERVIEHLIELKAQEAGDYVLLLNIYSSDGKWEKVTELRKFMKEKGIQTTPGCST 510
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+ VH F+V D SHP EIY KL EI ++ + GYV E L E +
Sbjct: 511 IELKGVVHNFIVDDISHPRKHEIYDKLDEINKQLKIAGYVAEITSELHDLG--AEEKAHA 568
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
S+HSE+LA+AFG+L TP GT++R+ KNLRIC DC +F+K +S V+ R++++RDR RFHH
Sbjct: 569 LSYHSEKLALAFGVLATPPGTTIRVTKNLRICVDCHNFAKFLSGVYNRKVIIRDRTRFHH 628
Query: 901 FKDGACSCKDYW 936
F+DG CSC DYW
Sbjct: 629 FRDGGCSCNDYW 640
>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 308 bits (789), Expect = 2e-81
Identities = 152/312 (48%), Positives = 210/312 (67%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
R V +W S+IVGL VNG G+EA+ LF ++ R+G ++P+ +TF+G+L CSH G+++EG
Sbjct: 301 RSVVSWTSLIVGLAVNGLGNEALKLFGELERQG-LKPSEITFVGVLYACSHCGMLDEGFN 359
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YF M+ E + P I+H+GCMVDL RAG++ A I N P + V+WRTLLGAC IH
Sbjct: 360 YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
++E+GE A + LE +GD VLL+ +YA R +RK++ KG+K +PG+S
Sbjct: 420 GHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSL 479
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
+E+ V+ F++GDRSHP S+E YA L +IT+ + GYV L + +
Sbjct: 480 VELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETAL- 538
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
SHH+E++AIAF L+ TP GT +RI+KNLR+C DC K +SKVFEREI+VRDR RFHH
Sbjct: 539 -SHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHH 597
Query: 901 FKDGACSCKDYW 936
FKDG+CSCKDYW
Sbjct: 598 FKDGSCSCKDYW 609
Score = 60.5 bits (145), Expect = 1e-06
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RD WNS+I G +NG +EA+TL+R+M E GV+P+ T + LL C G + G +
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSE-GVEPDGFTMVSLLSACVELGALALGER 258
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
HM ++ L ++DLY + G A +V + V W +L+ ++
Sbjct: 259 -VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEE-RSVVSWTSLIVGLAVN 316
Query: 361 RNVEVGETAVRNLVHLET--LSAGDCVLLAGIYAENRD---QPGYAKMRKLIKDKGI 516
+G A++ LE L + + +YA + G+ R++ ++ GI
Sbjct: 317 ---GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
>ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
[Cucumis sativus]
Length = 609
Score = 308 bits (789), Expect = 2e-81
Identities = 152/312 (48%), Positives = 210/312 (67%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
R V +W S+IVGL VNG G+EA+ LF ++ R+G ++P+ +TF+G+L CSH G+++EG
Sbjct: 301 RSVVSWTSLIVGLAVNGLGNEALKLFGELERQG-LKPSEITFVGVLYACSHCGMLDEGFN 359
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
YF M+ E + P I+H+GCMVDL RAG++ A I N P + V+WRTLLGAC IH
Sbjct: 360 YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
++E+GE A + LE +GD VLL+ +YA R +RK++ KG+K +PG+S
Sbjct: 420 GHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSL 479
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
+E+ V+ F++GDRSHP S+E YA L +IT+ + GYV L + +
Sbjct: 480 VELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETAL- 538
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
SHH+E++AIAF L+ TP GT +RI+KNLR+C DC K +SKVFEREI+VRDR RFHH
Sbjct: 539 -SHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHH 597
Query: 901 FKDGACSCKDYW 936
FKDG+CSCKDYW
Sbjct: 598 FKDGSCSCKDYW 609
Score = 60.5 bits (145), Expect = 1e-06
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RD WNS+I G +NG +EA+TL+R+M E GV+P+ T + LL C G + G +
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSE-GVEPDGFTMVSLLSACVELGALALGER 258
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
HM ++ L ++DLY + G A +V + V W +L+ ++
Sbjct: 259 -VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEE-RSVVSWTSLIVGLAVN 316
Query: 361 RNVEVGETAVRNLVHLET--LSAGDCVLLAGIYAENRD---QPGYAKMRKLIKDKGI 516
+G A++ LE L + + +YA + G+ R++ ++ GI
Sbjct: 317 ---GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
>ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Solanum lycopersicum]
Length = 519
Score = 308 bits (788), Expect = 3e-81
Identities = 149/312 (47%), Positives = 214/312 (68%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
++V TW++MI G +G+G++A+ +F MLR G + PN +TF+ LL CSH GL+EEG +
Sbjct: 211 KNVITWSAMIAAYGYHGQGNKAVDMFPMMLRTG-ILPNKITFVSLLYACSHSGLVEEGKQ 269
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
F+ M+ E ++P IKH+ CMVDL GRAG+++++L++IE+ D LW LLGAC+IH
Sbjct: 270 LFNSMQKEYGVKPDIKHFTCMVDLLGRAGKIDESLKLIEDMAVEKDEGLWGALLGACRIH 329
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
VE+ E A ++L+ L+ +AG VLL+ IYA+ AK+R+L+ + +K PGW+W
Sbjct: 330 GCVELAEMAAKSLIELQPENAGHYVLLSNIYAKAGKWQDMAKIRELMSHQRLKKVPGWTW 389
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+D +HRF VGD +HP SKEIY KLK + +E + GYV + L + +
Sbjct: 390 IEVDNKIHRFSVGDHTHPLSKEIYEKLKYLLKELEISGYVPDTNFVLHDVDEELKLGNLF 449
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
HSE+LAIAFGL+ TP+ +++RI+KNLR+C DC +F K +S+V R I+VRD RFHH
Sbjct: 450 S--HSEKLAIAFGLISTPEQSTIRIMKNLRVCGDCHTFCKFVSQVTSRVIIVRDANRFHH 507
Query: 901 FKDGACSCKDYW 936
FK+GACSCKDYW
Sbjct: 508 FKEGACSCKDYW 519
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 306 bits (785), Expect = 6e-81
Identities = 151/312 (48%), Positives = 209/312 (66%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV W++M+ GL ++GRG EAI+LF +M +E V+PNSVT + +LC CSH GL+EEG +
Sbjct: 435 RDVFVWSAMVAGLAMHGRGKEAISLFLKM-QEHKVKPNSVTLINVLCACSHSGLVEEGRE 493
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
F+ M + + PG+KHY C+VD+ GRAGELE+A ++I N P P +W LLGACK+H
Sbjct: 494 IFNQMENIYGIVPGVKHYACLVDILGRAGELEEAEELINNMPVTPGPSVWGALLGACKLH 553
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
N+E+ E A LV LE + G VLL+ IYA++ + +RK +K+ G+K PG S
Sbjct: 554 GNLELAEQACNRLVELEPENHGAYVLLSNIYAKSGKWDEVSLLRKHMKECGLKKEPGCSS 613
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+ VH F+VGD SHP S++IYAKL EI VGYV + + L + +
Sbjct: 614 IEVHSIVHEFLVGDNSHPQSQKIYAKLDEIAARLKHVGYVSNKSQIL-QLVEEEDMQEQA 672
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
+ HSE+LA+AFGL+ +R+VKNLR+C DC + +K +SK++ REI++RDR RFHH
Sbjct: 673 LNLHSEKLAMAFGLISVAPSQPIRVVKNLRVCADCHAVAKLLSKLYNREIILRDRYRFHH 732
Query: 901 FKDGACSCKDYW 936
FK+G CSCKDYW
Sbjct: 733 FKEGNCSCKDYW 744
Score = 59.7 bits (143), Expect = 2e-06
Identities = 35/114 (30%), Positives = 60/114 (52%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV +WN+MI+G G DEA+ +F +M E V+PN VT + +L C + +E G +
Sbjct: 201 RDVVSWNTMILGFAEGGYADEALKMFHRM-GEENVRPNGVTMMAVLSACGKKLDLEFG-R 258
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLL 342
+ H+ ++ + ++D+Y + G +E A ++ D V W T+L
Sbjct: 259 WVHVFIKRNGIRESLILDNAILDMYMKCGSIEDAERLFHKMGE-KDIVSWTTML 311
Score = 58.9 bits (141), Expect = 3e-06
Identities = 28/120 (23%), Positives = 65/120 (54%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
+D++ WN++I +G+ EA+++F ++ +P+ VT + L C+ G I+ G
Sbjct: 333 QDIAAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACAQLGAIDLGG- 391
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
+ H+ + ++ ++D+Y + G++EKAL++ + S ++ D +W ++ +H
Sbjct: 392 WIHVYIKKQGIKLNCHLTTALIDMYSKCGDVEKALEMFD-SVNIRDVFVWSAMVAGLAMH 450
>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 306 bits (784), Expect = 8e-81
Identities = 148/312 (47%), Positives = 210/312 (67%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
++V +W +I GL NG+G +A+ F ML E V+PN VTF+G+L CSH GL++EG
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLML-EKNVEPNDVTFIGVLSACSHAGLVDEGRD 448
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLLGACKIH 360
F M + ++P I+HYGCMVD+ GRAG +E+A Q I+N P + V+WRTLL +CK+H
Sbjct: 449 LFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508
Query: 361 RNVEVGETAVRNLVHLETLSAGDCVLLAGIYAENRDQPGYAKMRKLIKDKGIKTSPGWSW 540
+NVE+GE +++ L+ LE +GD +LL+ IYA K+R +K+KGIK +PG S
Sbjct: 509 KNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSL 568
Query: 541 IEIDEGVHRFVVGDRSHPYSKEIYAKLKEITREAALVGYVEEEEESLGSAAPRGEWPGIS 720
IE+D +H F D H S+EIY ++++ ++ GYV E+ A + +
Sbjct: 569 IELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSV- 627
Query: 721 GSHHSERLAIAFGLLRTPDGTSLRIVKNLRICRDCRSFSKTMSKVFEREILVRDRVRFHH 900
SHHSE+LAIAFGL+++P GT++RI KNLR+C DC + +K +SKVF REI+VRDR RFHH
Sbjct: 628 -SHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHH 686
Query: 901 FKDGACSCKDYW 936
FK+G+CSC DYW
Sbjct: 687 FKEGSCSCNDYW 698
Score = 57.8 bits (138), Expect = 6e-06
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = +1
Query: 1 RDVSTWNSMIVGLGVNGRGDEAITLFRQMLREGGVQPNSVTFLGLLCGCSHQGLIEEGAK 180
RDV W++MI G R EA+ LF +M ++ + PN +T + +L C+ G +E G K
Sbjct: 289 RDVVAWSAMISGYSQASRCREALDLFHEM-QKANIDPNEITMVSILSSCAVLGALETG-K 346
Query: 181 YFHMMRSELNLQPGIKHYGCMVDLYGRAGELEKALQVIENSPSLDDPVLWRTLL 342
+ H + ++ + ++D Y + G +E +++V P + + + W L+
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP-VKNVLSWTVLI 399